An Updated Catalogue and Review of Afrotherian (Afroplacentalia) Mammals in the Amathole Museum Collection, Eastern Cape Province, South Africa
- Authors: Mahala, Buyiswa
- Date: 2021-03
- Subjects: Mammals
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10353/20741 , vital:46513
- Description: The Mammalogy Collection of the Amathole Museum is one of the most comprehensive mammal collections in Africa, with a specialisation in southern African fauna. It was accumulated over almost 100 years, in some instances from areas that no longer support sustainable populations of wildlife. The collection, therefore, is irreplaceable. A museum collection is only as good as its accessibility to students and researchers for it to perform its functions as a biodiversity archive. Accessibility, in turn, depends on up-to-date taxonomy and classification; good curation practices; public awareness of the collection; and electronic access to the details of the collection’s composition. The higher-level taxonomy of the Class Mammalia has undergone extensive changes since the adoption of molecular systematic techniques. Phylogenetic reconstructions based on large DNA sequence databases consistently group placental mammals into four superorders: Laurasiatheria (carnivores, bats, ungulates, whales); Euarchontoglires, a super-clade that includes primates (apes, monkeys and allies), rodents (mouse, rat and guinea pig), lagomorphs, (rabbit and hares), dermopterans (flying lemurs or colugos) and scandentians (tree shrew); Xenarthra (armadillos, anteaters, sloths), and Afrotheria (elephants, sea cows, tenrecs, aardvarks, sengis, golden moles, hyraxes). New relationships have been recognised that have required the erection of new taxonomic groups. Most of the Amathole Museum mammal collection was assembled and accessioned long before this new system was devised, and I undertook this project to begin the re-organisation of the collection according to the new information. I conducted and audit and inventory of all specimens of Afrotheria, or the mammals of African origin, housed in the Amathole Museum collection. I photographed the specimens and corrected and updated their taxonomic details. As we now live in an age of digital information, natural history collections need to be available online to extend public access. Specimen details were entered into Excel files, and their localities were mapped. This kind of information has the possibility of transforming biological curricula to include more authentic and inquiry-driven educational experiences. My future goals are to acquire Malagasy tenrecs for the Amathole Afrotheria collection, and to investigate the taxonomic validity of the Amathole hyrax collection, as many specimens were found with confusing and out-of-date classifications. , Thesis (MSc) (Zoology) -- University of Fort Hare, 2021
- Full Text:
- Authors: Mahala, Buyiswa
- Date: 2021-03
- Subjects: Mammals
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10353/20741 , vital:46513
- Description: The Mammalogy Collection of the Amathole Museum is one of the most comprehensive mammal collections in Africa, with a specialisation in southern African fauna. It was accumulated over almost 100 years, in some instances from areas that no longer support sustainable populations of wildlife. The collection, therefore, is irreplaceable. A museum collection is only as good as its accessibility to students and researchers for it to perform its functions as a biodiversity archive. Accessibility, in turn, depends on up-to-date taxonomy and classification; good curation practices; public awareness of the collection; and electronic access to the details of the collection’s composition. The higher-level taxonomy of the Class Mammalia has undergone extensive changes since the adoption of molecular systematic techniques. Phylogenetic reconstructions based on large DNA sequence databases consistently group placental mammals into four superorders: Laurasiatheria (carnivores, bats, ungulates, whales); Euarchontoglires, a super-clade that includes primates (apes, monkeys and allies), rodents (mouse, rat and guinea pig), lagomorphs, (rabbit and hares), dermopterans (flying lemurs or colugos) and scandentians (tree shrew); Xenarthra (armadillos, anteaters, sloths), and Afrotheria (elephants, sea cows, tenrecs, aardvarks, sengis, golden moles, hyraxes). New relationships have been recognised that have required the erection of new taxonomic groups. Most of the Amathole Museum mammal collection was assembled and accessioned long before this new system was devised, and I undertook this project to begin the re-organisation of the collection according to the new information. I conducted and audit and inventory of all specimens of Afrotheria, or the mammals of African origin, housed in the Amathole Museum collection. I photographed the specimens and corrected and updated their taxonomic details. As we now live in an age of digital information, natural history collections need to be available online to extend public access. Specimen details were entered into Excel files, and their localities were mapped. This kind of information has the possibility of transforming biological curricula to include more authentic and inquiry-driven educational experiences. My future goals are to acquire Malagasy tenrecs for the Amathole Afrotheria collection, and to investigate the taxonomic validity of the Amathole hyrax collection, as many specimens were found with confusing and out-of-date classifications. , Thesis (MSc) (Zoology) -- University of Fort Hare, 2021
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The acoustic niche and conservation status of the recently described Hogsback caco, Cacosternum thorini (Amphibia: Pyxicephalidae), Hogsback, Eastern Cape, South Africa
- Authors: Kom, Nokuthula
- Date: 2021-02
- Subjects: Amphibians
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10353/20429 , vital:45665
- Description: Animals may compete for acoustic space (acoustic niche) in the same way they do for habitat space. The most intense competition involves individuals with the most similar resource requirements (i.e. conspecifics), but if competition is interspecific, then mate recognition must occur both within and between species. The coexistence of the bronze caco (Cacosternum nanum) and the Hogsback caco (C. thorini) in the Tor Doone area of Hogsback could be interpreted as a result of past competition, which drove acoustic partitioning by means of the evolution of specific calls that do not overlap in frequency. Frogs are known to coexist well with other frog species because of their highly specific advertisement calls, which differ even between closely related species. One of the main aims of the project was to record and provide a description of the call of the recently described Hogsback caco, C. thorini. I identified 30 calling males and recorded each for 10 min in February 2016, yielding a total of 235 calls. Summary values for the calls include duration of 40 ± 14 ms, with 16 ± 5 pulses produced at a pulse-rate of 46 ± 21 s-1 and a mean dominant frequency of 4.19 ± 0.58 kHz. The call of C. thorini differs from those of all other cacos, by its incremental structure (increased number of pulses within consecutive units). My second goal was to use playbacks to investigate the preferred habitat of C. thorini and to compare it with that of C. nanum. I conducted experiments to measure the propagation of C. thorini and C. nanum calls in three different habitats (C. thorini habitat, C. nanum habitat, and grassland with no water bodies). Finally, I investigated the effect of drought and flood on the pools used by males as calling sites, using a buried basin to which I added water in 10 litre aliquots. The optimal water level for call propagation in the artificial pools was half-full. Using playbacks, I tested whether the two species responded to each other’s calls. I found that, although the two species call at the same time and each call in response to the other’s calls, they do not recognise heterospecific calls; they simply respond to noise. I found no evidence of acoustic competition between the two species, and in fact, the abundant, dominant species, C. nanum, was rare in the C. thorini preferred habitat. The results of this study may assist efforts to conserve endemic amphibians in the Amatola Mountains. , Thesis (MSc) -- Faculty of Science and Agriculture, 2021
- Full Text:
- Authors: Kom, Nokuthula
- Date: 2021-02
- Subjects: Amphibians
- Language: English
- Type: Master's theses , text
- Identifier: http://hdl.handle.net/10353/20429 , vital:45665
- Description: Animals may compete for acoustic space (acoustic niche) in the same way they do for habitat space. The most intense competition involves individuals with the most similar resource requirements (i.e. conspecifics), but if competition is interspecific, then mate recognition must occur both within and between species. The coexistence of the bronze caco (Cacosternum nanum) and the Hogsback caco (C. thorini) in the Tor Doone area of Hogsback could be interpreted as a result of past competition, which drove acoustic partitioning by means of the evolution of specific calls that do not overlap in frequency. Frogs are known to coexist well with other frog species because of their highly specific advertisement calls, which differ even between closely related species. One of the main aims of the project was to record and provide a description of the call of the recently described Hogsback caco, C. thorini. I identified 30 calling males and recorded each for 10 min in February 2016, yielding a total of 235 calls. Summary values for the calls include duration of 40 ± 14 ms, with 16 ± 5 pulses produced at a pulse-rate of 46 ± 21 s-1 and a mean dominant frequency of 4.19 ± 0.58 kHz. The call of C. thorini differs from those of all other cacos, by its incremental structure (increased number of pulses within consecutive units). My second goal was to use playbacks to investigate the preferred habitat of C. thorini and to compare it with that of C. nanum. I conducted experiments to measure the propagation of C. thorini and C. nanum calls in three different habitats (C. thorini habitat, C. nanum habitat, and grassland with no water bodies). Finally, I investigated the effect of drought and flood on the pools used by males as calling sites, using a buried basin to which I added water in 10 litre aliquots. The optimal water level for call propagation in the artificial pools was half-full. Using playbacks, I tested whether the two species responded to each other’s calls. I found that, although the two species call at the same time and each call in response to the other’s calls, they do not recognise heterospecific calls; they simply respond to noise. I found no evidence of acoustic competition between the two species, and in fact, the abundant, dominant species, C. nanum, was rare in the C. thorini preferred habitat. The results of this study may assist efforts to conserve endemic amphibians in the Amatola Mountains. , Thesis (MSc) -- Faculty of Science and Agriculture, 2021
- Full Text:
Population, communication and habitat comparisons between the major gummivorous strepsirhines of Madagascar (phaner) and Cameroon (euoticus)
- Authors: Forbanka, Derick Nomuh
- Date: 2016
- Subjects: Adaptation (Biology) , Mammals -- Evolution , Mammals -- Behavior
- Language: English
- Type: Thesis , Doctoral , Zoology
- Identifier: http://hdl.handle.net/10353/15957 , vital:40567
- Description: The suborder Strepsirhini contains a large proportion of the living gummivorous mammal taxa, and includes two genera of specialist gummivores, Euoticus and Phaner, which present particularly interesting cases of convergent adaptive evolution in Africa and Madagascar, respectively. Although these genera are not closely related, they share several anatomical, behavioural and physiological specialisations associated with their diets, and despite their biogeographical separation, there seems to be substantial coincidence in their habitats and habits. Neither the ecology nor the systematics of Phaner and Euoticus has been the subject of much detailed research, and little is known of the conservation status of the genera. Even their specific diversity is unresolved. In this study I investigated and compared aspects of their ecology at both a macro-and a microhabitat scale, including wild populations of all groups within the two genera that have been accorded species status in recent field guides and systematic reviews. I also studied aspects of their social communication behaviour as clues to their species-level diversity. Species and their formation (or speciation) have inspired a great deal of evolutionary research, but remain contentious issues in evolutionary biology. This is due both to the difficulties inherent in inferring the details of a dynamic biological process that occurred over some time in the past from the recent, relatively static patterns of variation observed, as well as the limited consensus among biologists in identifying such patterns. It is therefore important to distinguish the kinds of patterns in nature that are predicted by different views of species and speciation, and also to see how well these predictions fare when applied to the speciation patterns found in strepsirhine primates. Theories of speciation cannot be separated from species concepts, and one concept widely supported in primatology is the Recognition Concept of species because of its heuristic nature. The Recognition Concept is based on Specific-mate Recognition Systems (SMRS). I focussed on SMRS features of Euoticus and Phaner, loud call specificity, and species’ preferred habitats. My results provided some support for the distinctiveness of currently identified species, although this was not clear-cut. Population densities of both Phaner and Euoticus appear to have declined in recent years, even though both Phaner and Euoticus appear to be well adapted to both primary and secondary forest, and exhibit ecological plasticity. Statistically some loud call parameters vary among the putative species of the genus Phaner and not Euoticus. Phaner pallescens at Kirindy, Madasgascar was clearly able to discriminate loud calls of its own population from other proposed species within the genus. Most loud call parameters did not show any statistical degradation with increasing distance. A crucial finding of my study was that the two lineages are not only convergent in terms of dietary and locomotor aspects of their ecology, but also in the structures of their loud calls. The environmental adaptation of communication systems is often overlooked when studying adaptive convergence, but my study indicates that acoustic properties are a crucial aspect of a species’ preferred habitat. The results of this study can be used to improve conservation planning, and also add to our understanding of the evolutionary history of strepsirhine primates.
- Full Text:
- Authors: Forbanka, Derick Nomuh
- Date: 2016
- Subjects: Adaptation (Biology) , Mammals -- Evolution , Mammals -- Behavior
- Language: English
- Type: Thesis , Doctoral , Zoology
- Identifier: http://hdl.handle.net/10353/15957 , vital:40567
- Description: The suborder Strepsirhini contains a large proportion of the living gummivorous mammal taxa, and includes two genera of specialist gummivores, Euoticus and Phaner, which present particularly interesting cases of convergent adaptive evolution in Africa and Madagascar, respectively. Although these genera are not closely related, they share several anatomical, behavioural and physiological specialisations associated with their diets, and despite their biogeographical separation, there seems to be substantial coincidence in their habitats and habits. Neither the ecology nor the systematics of Phaner and Euoticus has been the subject of much detailed research, and little is known of the conservation status of the genera. Even their specific diversity is unresolved. In this study I investigated and compared aspects of their ecology at both a macro-and a microhabitat scale, including wild populations of all groups within the two genera that have been accorded species status in recent field guides and systematic reviews. I also studied aspects of their social communication behaviour as clues to their species-level diversity. Species and their formation (or speciation) have inspired a great deal of evolutionary research, but remain contentious issues in evolutionary biology. This is due both to the difficulties inherent in inferring the details of a dynamic biological process that occurred over some time in the past from the recent, relatively static patterns of variation observed, as well as the limited consensus among biologists in identifying such patterns. It is therefore important to distinguish the kinds of patterns in nature that are predicted by different views of species and speciation, and also to see how well these predictions fare when applied to the speciation patterns found in strepsirhine primates. Theories of speciation cannot be separated from species concepts, and one concept widely supported in primatology is the Recognition Concept of species because of its heuristic nature. The Recognition Concept is based on Specific-mate Recognition Systems (SMRS). I focussed on SMRS features of Euoticus and Phaner, loud call specificity, and species’ preferred habitats. My results provided some support for the distinctiveness of currently identified species, although this was not clear-cut. Population densities of both Phaner and Euoticus appear to have declined in recent years, even though both Phaner and Euoticus appear to be well adapted to both primary and secondary forest, and exhibit ecological plasticity. Statistically some loud call parameters vary among the putative species of the genus Phaner and not Euoticus. Phaner pallescens at Kirindy, Madasgascar was clearly able to discriminate loud calls of its own population from other proposed species within the genus. Most loud call parameters did not show any statistical degradation with increasing distance. A crucial finding of my study was that the two lineages are not only convergent in terms of dietary and locomotor aspects of their ecology, but also in the structures of their loud calls. The environmental adaptation of communication systems is often overlooked when studying adaptive convergence, but my study indicates that acoustic properties are a crucial aspect of a species’ preferred habitat. The results of this study can be used to improve conservation planning, and also add to our understanding of the evolutionary history of strepsirhine primates.
- Full Text:
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