Between blue and light
- Authors: Campbell, Jennifer
- Date: 2018
- Subjects: South African fiction (English) -- 21st century , Short stories, South African (English) -- 21st century
- Language: English
- Type: text , Thesis , Masters , MA
- Identifier: http://hdl.handle.net/10962/63570 , vital:28441
- Description: My novella follows a narrator observing her life, as she struggles with what it is to live in a world that she finds simultaneously frightening and beautiful. The story touches on the limitations of human connection and with loss in various forms. Set in both Cape Town and small town South Africa, the story explores the inner life of a woman detached and adrift.
- Full Text:
- Date Issued: 2018
- Authors: Campbell, Jennifer
- Date: 2018
- Subjects: South African fiction (English) -- 21st century , Short stories, South African (English) -- 21st century
- Language: English
- Type: text , Thesis , Masters , MA
- Identifier: http://hdl.handle.net/10962/63570 , vital:28441
- Description: My novella follows a narrator observing her life, as she struggles with what it is to live in a world that she finds simultaneously frightening and beautiful. The story touches on the limitations of human connection and with loss in various forms. Set in both Cape Town and small town South Africa, the story explores the inner life of a woman detached and adrift.
- Full Text:
- Date Issued: 2018
Biochemical characterisation and small molecule modulation of the interaction between two cytosolic Hsp70s from Trypanosoma brucei and potential co-chaperones
- Authors: Bentley, Stephen John
- Date: 2018
- Subjects: Uncatalogued
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/63402 , vital:28407
- Description: Expected release date-April 2019
- Full Text:
- Date Issued: 2018
- Authors: Bentley, Stephen John
- Date: 2018
- Subjects: Uncatalogued
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/63402 , vital:28407
- Description: Expected release date-April 2019
- Full Text:
- Date Issued: 2018
Bioinformatics tool development with a focus on structural bioinformatics and the analysis of genetic variation in humans
- Authors: Brown, David K
- Date: 2018
- Subjects: Bioinformatics , Human genetics -- Variation , High performance computing , Workflow management systems , Molecular dynamics , Next generation sequencing , Human Mutation Analysis (HUMA)
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/60708 , vital:27820
- Description: This thesis is divided into three parts, united under the general theme of bioinformatics tool development and variation analysis. Part 1 describes the design and development of the Job Management System (JMS), a workflow management system for high performance computing (HPC). HPC has become an integral part of bioinformatics. Computational methods for molecular dynamics and next generation sequencing (NGS) analysis, which require complex calculations on large datasets, are not yet feasible on desktop computers. As such, powerful computer clusters have been employed to perform these calculations. However, making use of these HPC clusters requires familiarity with command line interfaces. This excludes a large number of researchers from taking advantage of these resources. JMS was developed as a tool to make it easier for researchers without a computer science background to make use of HPC. Additionally, JMS can be used to host computational tools and pipelines and generates both web-based interfaces and RESTful APIs for those tools. The web-based interfaces can be used to quickly and easily submit jobs to the underlying cluster. The RESTful web API, on the other hand, allows JMS to provided backend functionality for external tools and web servers that want to run jobs on the cluster. Numerous tools and workflows have already been added to JMS, several of which have been incorporated into external web servers. One such web server is the Human Mutation Analysis (HUMA) web server and database. HUMA, the topic of part 2 of this thesis, is a platform for the analysis of genetic variation in humans. HUMA aggregates data from various existing databases into a single, connected and related database. The advantages of this are realized in the powerful querying abilities that it provides. HUMA includes protein, gene, disease, and variation data and can be searched from the angle of any one of these categories. For example, searching for a protein will return the protein data (e.g. protein sequences, structures, domains and families, and other meta-data). However, the related nature of the database means that genes, diseases, variation, and literature related to the protein will also be returned, giving users a powerful and holistic view of all data associated with the protein. HUMA also provides links to the original sources of the data, allowing users to follow the links to find additional details. HUMA aims to be a platform for the analysis of genetic variation. As such, it also provides tools to visualize and analyse the data (several of which run on the underlying cluster, via JMS). These tools include alignment and 3D structure visualization, homology modeling, variant analysis, and the ability to upload custom variation datasets and map them to proteins, genes and diseases. HUMA also provides collaboration features, allowing users to share and discuss datasets and job results. Finally, part 3 of this thesis focused on the development of a suite of tools, MD-TASK, to analyse genetic variation at the protein structure level via network analysis of molecular dynamics simulations. The use of MD-TASK in combination with the tools developed in the previous parts of this thesis is showcased via the analysis of variation in the renin-angiotensinogen complex, a vital part of the renin-angiotensin system.
- Full Text:
- Date Issued: 2018
- Authors: Brown, David K
- Date: 2018
- Subjects: Bioinformatics , Human genetics -- Variation , High performance computing , Workflow management systems , Molecular dynamics , Next generation sequencing , Human Mutation Analysis (HUMA)
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/60708 , vital:27820
- Description: This thesis is divided into three parts, united under the general theme of bioinformatics tool development and variation analysis. Part 1 describes the design and development of the Job Management System (JMS), a workflow management system for high performance computing (HPC). HPC has become an integral part of bioinformatics. Computational methods for molecular dynamics and next generation sequencing (NGS) analysis, which require complex calculations on large datasets, are not yet feasible on desktop computers. As such, powerful computer clusters have been employed to perform these calculations. However, making use of these HPC clusters requires familiarity with command line interfaces. This excludes a large number of researchers from taking advantage of these resources. JMS was developed as a tool to make it easier for researchers without a computer science background to make use of HPC. Additionally, JMS can be used to host computational tools and pipelines and generates both web-based interfaces and RESTful APIs for those tools. The web-based interfaces can be used to quickly and easily submit jobs to the underlying cluster. The RESTful web API, on the other hand, allows JMS to provided backend functionality for external tools and web servers that want to run jobs on the cluster. Numerous tools and workflows have already been added to JMS, several of which have been incorporated into external web servers. One such web server is the Human Mutation Analysis (HUMA) web server and database. HUMA, the topic of part 2 of this thesis, is a platform for the analysis of genetic variation in humans. HUMA aggregates data from various existing databases into a single, connected and related database. The advantages of this are realized in the powerful querying abilities that it provides. HUMA includes protein, gene, disease, and variation data and can be searched from the angle of any one of these categories. For example, searching for a protein will return the protein data (e.g. protein sequences, structures, domains and families, and other meta-data). However, the related nature of the database means that genes, diseases, variation, and literature related to the protein will also be returned, giving users a powerful and holistic view of all data associated with the protein. HUMA also provides links to the original sources of the data, allowing users to follow the links to find additional details. HUMA aims to be a platform for the analysis of genetic variation. As such, it also provides tools to visualize and analyse the data (several of which run on the underlying cluster, via JMS). These tools include alignment and 3D structure visualization, homology modeling, variant analysis, and the ability to upload custom variation datasets and map them to proteins, genes and diseases. HUMA also provides collaboration features, allowing users to share and discuss datasets and job results. Finally, part 3 of this thesis focused on the development of a suite of tools, MD-TASK, to analyse genetic variation at the protein structure level via network analysis of molecular dynamics simulations. The use of MD-TASK in combination with the tools developed in the previous parts of this thesis is showcased via the analysis of variation in the renin-angiotensinogen complex, a vital part of the renin-angiotensin system.
- Full Text:
- Date Issued: 2018
Biological activities of plant extracts from Ficus elastica and Selaginella vogelli: an antimalarial, antitrypanosomal and cytotoxity evaluation
- Meyer, Franck, Isaacs, Michelle, Noundou, Xavier S, Krause, Rui W M, Teinkela, J E M, Hoppe, Heinrich C, Mpondo, Albert E M, Azebaze, Anatole G B, Nguemfo, Edwige L, Wintjens, Rene
- Authors: Meyer, Franck , Isaacs, Michelle , Noundou, Xavier S , Krause, Rui W M , Teinkela, J E M , Hoppe, Heinrich C , Mpondo, Albert E M , Azebaze, Anatole G B , Nguemfo, Edwige L , Wintjens, Rene
- Date: 2018
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/126142 , vital:35853 , https://doi.org/10.1016/j.sjbs.2017.07.002
- Description: The cytotoxic, antiplasmodial, and antitrypanosomal activities of two medicinal plants traditionally used in Cameroon were evaluated. Wood of Ficus elastica Roxb. ex Hornem. aerial roots (Moraceae) and Selaginella vogelii Spring (Selaginellaceae) leaves were collected from two different sites in Cameroon. In vitro cell-growth inhibition activities were assessed on methanol extract of plant materials against Plasmodium falciparum strain 3D7 and Trypanosoma brucei brucei, as well as against HeLa human cervical carcinoma cells. Criteria for activity were an IC50 value 10 μg/mL. The extract of S. vogelii did not significantly reduce the viability of P. falciparum at a concentration of 25 μg/mL but dramatically affected the trypanosome growth with an IC50 of 2.4 μg/mL. In contrast, at the same concentration, the extract of F. elastica exhibited plasmodiacidal activity (IC50 value of 9.5 μg/mL) and trypanocidal (IC50 value of 0.9 μg/mL) activity. Both extracts presented low cytotoxic effects on HeLa cancer cell line. These results indicate that the selected medicinal plants could be further investigated for identifying compounds that may be responsible for the observed activities and that may represent new leads in parasitical drug discovery.
- Full Text:
- Date Issued: 2018
- Authors: Meyer, Franck , Isaacs, Michelle , Noundou, Xavier S , Krause, Rui W M , Teinkela, J E M , Hoppe, Heinrich C , Mpondo, Albert E M , Azebaze, Anatole G B , Nguemfo, Edwige L , Wintjens, Rene
- Date: 2018
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/126142 , vital:35853 , https://doi.org/10.1016/j.sjbs.2017.07.002
- Description: The cytotoxic, antiplasmodial, and antitrypanosomal activities of two medicinal plants traditionally used in Cameroon were evaluated. Wood of Ficus elastica Roxb. ex Hornem. aerial roots (Moraceae) and Selaginella vogelii Spring (Selaginellaceae) leaves were collected from two different sites in Cameroon. In vitro cell-growth inhibition activities were assessed on methanol extract of plant materials against Plasmodium falciparum strain 3D7 and Trypanosoma brucei brucei, as well as against HeLa human cervical carcinoma cells. Criteria for activity were an IC50 value 10 μg/mL. The extract of S. vogelii did not significantly reduce the viability of P. falciparum at a concentration of 25 μg/mL but dramatically affected the trypanosome growth with an IC50 of 2.4 μg/mL. In contrast, at the same concentration, the extract of F. elastica exhibited plasmodiacidal activity (IC50 value of 9.5 μg/mL) and trypanocidal (IC50 value of 0.9 μg/mL) activity. Both extracts presented low cytotoxic effects on HeLa cancer cell line. These results indicate that the selected medicinal plants could be further investigated for identifying compounds that may be responsible for the observed activities and that may represent new leads in parasitical drug discovery.
- Full Text:
- Date Issued: 2018
Biological activities of tulbaghia violacea against cryptococcus species
- Authors: Mitradev, Pattoo
- Date: 2018
- Subjects: Violaceae -- Therapeutic use -- South Africa , Anticoagulants (Medicine) , Medicinal plants -- South Africa
- Language: English
- Type: Thesis , Doctoral , DPhil
- Identifier: http://hdl.handle.net/10948/32772 , vital:32357
- Description: Cryptococcus neoformans and Cryptococcus gattii, which are environmental yeasts, are the etiological agents of cryptococcosis in both immunocompromised and immunocompetent individuals, and account for high mortality and morbidity rates in sub-Saharan Africa. The current antifungal agents used for treatment of cryptococcal infections either target the fungal cell wall (β-(1,3) glucan and chitin) or cell membrane directly or ergosterol biosynthetic pathways or fungal DNA and RNA. Gaps in antifungal therapy include the unavailability and exhorbitant costs of these drugs especially to patients in the developing world. Drug resistance to conventional drugs is also an ever-increasing problem. It is therefore essential to find alternative natural compounds from medicinal plants that are safer, cheaper and more widely available. Tulbaghia violacea, also known as wild garlic, has been used as a traditional remedy in South Africa for the treatment of several ailments. Aqueous and organic extracts of the plant have been demonstrated to have antimicrobial and antifungal activity against several pathogens. However, there is a huge gap in our current knowledge in that the mechanism/s of action/s of these extracts have not been fully investigated. The focus of the current study therefore was to determine whether T. violacea extracts from the roots, rhizome, leaves and tubers exhibited antifungal activity against C. neoformans and C. gattii and to evaluate the ability of the rhizome extract to induce changes in key fungal virulence factors. Three mechanisms (ergosterol, β-(1,3) glucan and chitin production) regulating the antifungal activity of the rhizome extract were also examined. In the current study, phytochemical analysis of aqueous extracts of the roots, leaves, rhizomes and tubers showed that the rhizomes had the highest phenolic, saponin and tannin content when compared to the other plant organs. Fingerprinting by GC-MS revealed identical compounds in the different plant parts with the detection of 4 H Pyran-4-one DDMP (known antifungal), previously unreported in studies on T. violacea. The bulk of the extract comprised of 40% sulphur-containing and 20% furan-containing compounds. The remaining minor compounds comprised of 2x alcohols (13.3%), 1x pyran (6.7%), 1x ketone (6.7%), 1x halogen (6.7%) and 1x acid (6.7%) compounds. The rhizomes also had highest content of 2 methyl methioacetic acid, benzophenone and chloromethyl methylsulfide compared to the other plant parts. The rhizomes were found to be more potent against both pathogenic fungi tested here with an MIC and MFC of 1.25 mg/ml. Nystatin was included as a positive control when determining the MIC’s and MFC’s of the different plant extracts. The antifungal nature of the T. violacea extracts in the current study may be due to the synergistic effects of the sulphide, furan, pyran and ketone compounds present in the extracts, but this still remains to be verified in future studies. An investigation of the effects of an aqueous rhizome extract of T. violacea on Cryptococcus virulence factors showed that phospholipase activity of C. neoformans and C. gattii remained unaffected with increasing sub-lethal doses of the plant extract. There was significant reduction in urease production in both fungi in a dose dependent manner relative to the untreated cultures after 24 hr exposure to the extract. However, urease production reverted to normal after 48 hr post exposure implying that the cultures were able to recover due to temporary inhibition of urease activity. A significant decrease in melanin production was observed in both C. neoformans and C. gattii with increasing sub-inhibitory concentrations of the rhizome extract. Investigation of the effect of the plant extract on the ultrastucture of the fungi via Transmission Electron Microscopy showed the induction of cytomorphological changes in C. neoformans and C. gattii. Changes included thickening of the cell wall, an increase in the number of vacuoles, mitochondrial swelling and occasional detachment of the membrane from the cell wall. These changes suggest the activation of possible defence mechanisms to compensate for the loss of cellular materials or an effort to sequester toxic T. violacea components or toxic intermediates generated from inhibited cellular pathways. The capsule size and architecture remained unaltered in the presence of sub-lethal doses of the rhizome extract. To study the mechanism of action of the rhizome extract on ergosterol biosynthesis, total sterols were extracted and ergosterol, squalene, 2,3-oxidosqualene and lanosterol were quantified using Reverse Phase High Performance Liquid Chromatography. Ergosterol concentration declined in a dose dependent manner for both pathogenic yeasts similar to the positive control terbinafine, while there was a slight accumulation of squalene in C. gattii only. 2,3-oxidosqualene levels accumulated in both fungi relative to the untreated control. Lanosterol production showed an oscillatory trend for the two microorganisms. Together, these findings indicate that the rhizome extract is capable of inhibiting squalene epoxidase and 2,3-oxidosqualene/ lanosterol cyclase causing a decrease in ergosterol production.
- Full Text:
- Date Issued: 2018
- Authors: Mitradev, Pattoo
- Date: 2018
- Subjects: Violaceae -- Therapeutic use -- South Africa , Anticoagulants (Medicine) , Medicinal plants -- South Africa
- Language: English
- Type: Thesis , Doctoral , DPhil
- Identifier: http://hdl.handle.net/10948/32772 , vital:32357
- Description: Cryptococcus neoformans and Cryptococcus gattii, which are environmental yeasts, are the etiological agents of cryptococcosis in both immunocompromised and immunocompetent individuals, and account for high mortality and morbidity rates in sub-Saharan Africa. The current antifungal agents used for treatment of cryptococcal infections either target the fungal cell wall (β-(1,3) glucan and chitin) or cell membrane directly or ergosterol biosynthetic pathways or fungal DNA and RNA. Gaps in antifungal therapy include the unavailability and exhorbitant costs of these drugs especially to patients in the developing world. Drug resistance to conventional drugs is also an ever-increasing problem. It is therefore essential to find alternative natural compounds from medicinal plants that are safer, cheaper and more widely available. Tulbaghia violacea, also known as wild garlic, has been used as a traditional remedy in South Africa for the treatment of several ailments. Aqueous and organic extracts of the plant have been demonstrated to have antimicrobial and antifungal activity against several pathogens. However, there is a huge gap in our current knowledge in that the mechanism/s of action/s of these extracts have not been fully investigated. The focus of the current study therefore was to determine whether T. violacea extracts from the roots, rhizome, leaves and tubers exhibited antifungal activity against C. neoformans and C. gattii and to evaluate the ability of the rhizome extract to induce changes in key fungal virulence factors. Three mechanisms (ergosterol, β-(1,3) glucan and chitin production) regulating the antifungal activity of the rhizome extract were also examined. In the current study, phytochemical analysis of aqueous extracts of the roots, leaves, rhizomes and tubers showed that the rhizomes had the highest phenolic, saponin and tannin content when compared to the other plant organs. Fingerprinting by GC-MS revealed identical compounds in the different plant parts with the detection of 4 H Pyran-4-one DDMP (known antifungal), previously unreported in studies on T. violacea. The bulk of the extract comprised of 40% sulphur-containing and 20% furan-containing compounds. The remaining minor compounds comprised of 2x alcohols (13.3%), 1x pyran (6.7%), 1x ketone (6.7%), 1x halogen (6.7%) and 1x acid (6.7%) compounds. The rhizomes also had highest content of 2 methyl methioacetic acid, benzophenone and chloromethyl methylsulfide compared to the other plant parts. The rhizomes were found to be more potent against both pathogenic fungi tested here with an MIC and MFC of 1.25 mg/ml. Nystatin was included as a positive control when determining the MIC’s and MFC’s of the different plant extracts. The antifungal nature of the T. violacea extracts in the current study may be due to the synergistic effects of the sulphide, furan, pyran and ketone compounds present in the extracts, but this still remains to be verified in future studies. An investigation of the effects of an aqueous rhizome extract of T. violacea on Cryptococcus virulence factors showed that phospholipase activity of C. neoformans and C. gattii remained unaffected with increasing sub-lethal doses of the plant extract. There was significant reduction in urease production in both fungi in a dose dependent manner relative to the untreated cultures after 24 hr exposure to the extract. However, urease production reverted to normal after 48 hr post exposure implying that the cultures were able to recover due to temporary inhibition of urease activity. A significant decrease in melanin production was observed in both C. neoformans and C. gattii with increasing sub-inhibitory concentrations of the rhizome extract. Investigation of the effect of the plant extract on the ultrastucture of the fungi via Transmission Electron Microscopy showed the induction of cytomorphological changes in C. neoformans and C. gattii. Changes included thickening of the cell wall, an increase in the number of vacuoles, mitochondrial swelling and occasional detachment of the membrane from the cell wall. These changes suggest the activation of possible defence mechanisms to compensate for the loss of cellular materials or an effort to sequester toxic T. violacea components or toxic intermediates generated from inhibited cellular pathways. The capsule size and architecture remained unaltered in the presence of sub-lethal doses of the rhizome extract. To study the mechanism of action of the rhizome extract on ergosterol biosynthesis, total sterols were extracted and ergosterol, squalene, 2,3-oxidosqualene and lanosterol were quantified using Reverse Phase High Performance Liquid Chromatography. Ergosterol concentration declined in a dose dependent manner for both pathogenic yeasts similar to the positive control terbinafine, while there was a slight accumulation of squalene in C. gattii only. 2,3-oxidosqualene levels accumulated in both fungi relative to the untreated control. Lanosterol production showed an oscillatory trend for the two microorganisms. Together, these findings indicate that the rhizome extract is capable of inhibiting squalene epoxidase and 2,3-oxidosqualene/ lanosterol cyclase causing a decrease in ergosterol production.
- Full Text:
- Date Issued: 2018
Biological activity of macrofungi in South Africa against respiratory and lung disease
- Authors: Didloff, Jenske
- Date: 2018
- Subjects: Macrofungi , Microbiology Medical microbiology
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/30138 , vital:30835
- Description: Macrofungi represent an untapped source of natural bioactive compounds for various diseases, which have been targeted as potential therapeutic agents. The medicinal uses of macrofungi discovered to date include anticancer, antidiabetic, antioxidant, antimicrobial, and immunomodulatory properties. The knowledge regarding the medicinal uses of macrofungi in Africa is limited; however, it is believed that Africa may contain a large number of unidentified species of macrofungi. The objectives of this study were to: (i) screen the macrofungal extracts for antimicrobial activity against microorganisms responsible for respiratory diseases (e.g. Pseudomonas aeruginosa, Klebsiella pneumoniae, Streptococcus pneumoniae, Streptococcus pyogenes, Staphylococcus aureus, Mycobacterium tuberculosis, HIV-1), (ii) determine the effect of macrofungal extracts on bacterial morphology, (iii) investigate the cytotoxicity of macrofungal extracts against human lung carcinoma cells, and to elucidate the mechanism/s of action of cytotoxicity/anticancer activity. In vitro bioassays for antimicrobial activity included: ρ-iodonitrotetrazolium chloride assays and microplate alamar blue assay (MABA), while the HIV-1 reverse transcriptase colorimetric ELISA and HIV-1 protease fluorometric assay kits were used for anti-HIV activity. Cytotoxicity of the macrofungal species against A549 lung cancer cell line was measured using the 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide (MTT) assay, and the IC50 values determined for the most cytotoxic macrofungal spp. The mechanism of cytotoxicity was investigated by cell cycle analysis and fluorescent staining to observe morphological and biochemical changes (i.e. acridine orange, caspase activation). Ethanol extracts of Amanita foetidissima, Gymnopilus junonius, Pisolithus tinctorius, Fomitopsis lilacinogilva, Stereum hirsutum and Pycnoporus sanguineus showed higher antimicrobial activity against the Gram-positive bacteria than aqueous extracts, with S. pneumoniae being the most susceptible. The ethanol extracts of Agaricus campestris, Chlorophyllum molybdites, Gymnopilus penetrans, Pseudophaeolus baudonii and Laetiporus sulphureus exhibited anti-TB (tuberculosis) activity with minimum inhibitory concentrations (MICs) ranging between 500-1,000 μg/mL. C. molybdites ethanol extract inhibited HIV-1 protease activity (IC50: 49.7 μg/mL). The macrofungal extracts did not inhibit HIV-1 reverse transcriptase activity. Ethanol extracts of F. lilacinogilva, G. junonius, P. sanguineus and the aqueous extract iv of P. baudonii were cytotoxic against A549 lung cancer cells at IC50 values of 69.2±3.6, 57±5, 7.4±1.1 and 53.6±1.1 μg/mL, respectively. Cell cycle arrest was observed in the G2 phase for both P. sanguineus and P. baudonii, and G2/M and early M phases for G. junonius and F. lilacinogilva, respectively. Apoptosis induced by macrofungal extracts was confirmed by fluorescent staining. Morphological and biochemical changes included chromatin condensation, membrane blebbing, loss of cytoskeletal structure, caspase activation and phosphatidylserine translocation. This study demonstrates the biological activities of selected macrofungal extracts and their potential mechanisms of action. Isolation and identification of active compounds require further analysis.
- Full Text:
- Date Issued: 2018
- Authors: Didloff, Jenske
- Date: 2018
- Subjects: Macrofungi , Microbiology Medical microbiology
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10948/30138 , vital:30835
- Description: Macrofungi represent an untapped source of natural bioactive compounds for various diseases, which have been targeted as potential therapeutic agents. The medicinal uses of macrofungi discovered to date include anticancer, antidiabetic, antioxidant, antimicrobial, and immunomodulatory properties. The knowledge regarding the medicinal uses of macrofungi in Africa is limited; however, it is believed that Africa may contain a large number of unidentified species of macrofungi. The objectives of this study were to: (i) screen the macrofungal extracts for antimicrobial activity against microorganisms responsible for respiratory diseases (e.g. Pseudomonas aeruginosa, Klebsiella pneumoniae, Streptococcus pneumoniae, Streptococcus pyogenes, Staphylococcus aureus, Mycobacterium tuberculosis, HIV-1), (ii) determine the effect of macrofungal extracts on bacterial morphology, (iii) investigate the cytotoxicity of macrofungal extracts against human lung carcinoma cells, and to elucidate the mechanism/s of action of cytotoxicity/anticancer activity. In vitro bioassays for antimicrobial activity included: ρ-iodonitrotetrazolium chloride assays and microplate alamar blue assay (MABA), while the HIV-1 reverse transcriptase colorimetric ELISA and HIV-1 protease fluorometric assay kits were used for anti-HIV activity. Cytotoxicity of the macrofungal species against A549 lung cancer cell line was measured using the 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide (MTT) assay, and the IC50 values determined for the most cytotoxic macrofungal spp. The mechanism of cytotoxicity was investigated by cell cycle analysis and fluorescent staining to observe morphological and biochemical changes (i.e. acridine orange, caspase activation). Ethanol extracts of Amanita foetidissima, Gymnopilus junonius, Pisolithus tinctorius, Fomitopsis lilacinogilva, Stereum hirsutum and Pycnoporus sanguineus showed higher antimicrobial activity against the Gram-positive bacteria than aqueous extracts, with S. pneumoniae being the most susceptible. The ethanol extracts of Agaricus campestris, Chlorophyllum molybdites, Gymnopilus penetrans, Pseudophaeolus baudonii and Laetiporus sulphureus exhibited anti-TB (tuberculosis) activity with minimum inhibitory concentrations (MICs) ranging between 500-1,000 μg/mL. C. molybdites ethanol extract inhibited HIV-1 protease activity (IC50: 49.7 μg/mL). The macrofungal extracts did not inhibit HIV-1 reverse transcriptase activity. Ethanol extracts of F. lilacinogilva, G. junonius, P. sanguineus and the aqueous extract iv of P. baudonii were cytotoxic against A549 lung cancer cells at IC50 values of 69.2±3.6, 57±5, 7.4±1.1 and 53.6±1.1 μg/mL, respectively. Cell cycle arrest was observed in the G2 phase for both P. sanguineus and P. baudonii, and G2/M and early M phases for G. junonius and F. lilacinogilva, respectively. Apoptosis induced by macrofungal extracts was confirmed by fluorescent staining. Morphological and biochemical changes included chromatin condensation, membrane blebbing, loss of cytoskeletal structure, caspase activation and phosphatidylserine translocation. This study demonstrates the biological activities of selected macrofungal extracts and their potential mechanisms of action. Isolation and identification of active compounds require further analysis.
- Full Text:
- Date Issued: 2018
Biological activity of plant extracts and isolated compounds from Alchornea laxiflora: Anti-HIV, antibacterial and cytotoxicity evaluation
- Ndinteh, Derek T, Olivier, Denise K, Noundou, Xavier S, Krause, Rui W M, Mnkandhla, D, Isaacs, Michelle, Hoppe, Heinrich C, Muganza, F M, Mbafor, J T, Van Vuuren, S F, Patnala, S
- Authors: Ndinteh, Derek T , Olivier, Denise K , Noundou, Xavier S , Krause, Rui W M , Mnkandhla, D , Isaacs, Michelle , Hoppe, Heinrich C , Muganza, F M , Mbafor, J T , Van Vuuren, S F , Patnala, S
- Date: 2018
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/126634 , vital:35907 , https://doi.org/10.1016/j.sajb.2018.08.010
- Description: This study was designed to assess the cytotoxicity, anti-HIV and antibacterial efficacy of various solvent extracts of roots, stem and leaves of Alchornea laxiflora, as well as five compounds isolated from its methanolic stem extract viz.; ellagic acid (1); 3-O-methyl-ellagic acid (2), 3-O-β-d-glucopyranosyl-β-sitosterol (3), 3-O-acetyl-oleanolic acid (4) and 3-O-acetyl-ursolic acid (5). The tested crude extracts were prepared from several solvent polarities including: hexane (Hex), chloroform (CHCl3), ethyl acetate (EtOAc), ethanol (EtOH), methanol (MeOH) and water (H2O). The anti-HIV properties were assessed on HIV-1 subtype C integrase while the cytotoxicity was tested against Hela cells. The antibacterial activity was studied on a panel of pathogens including gastrointestinal, skin, respiratory and urinary-tract infection causing Gram positive bacteria viz.; Bacillus cereus (ATCC 11778), Enterococcus faecalis (ATCC 29212), Staphylococcus aureus (ATCC 25923) and Staphylococcus saprophyticus (ATCC 15305)] and Gram-negative bacteria, i.e., Escherichia coli (ATCC 25922), Klebsiella pneumoniae (ATCC 13883), Moraxella catarrhalis (ATCC 23246). All the tested samples were determined to be non-toxic due to the low inhibitions observed. The most potent anti-HIV activity was observed for the methanolic extract of A. laxiflora root (ALR4) with an IC50 value of 0.21 ng/ml, which was more active than chicoric acid used as reference drug (6.82 nM). Roots, stem and leaves of A. laxiflora extracts exhibited antibacterial activities against most of the Gram-positive bacteria with the minimum inhibitory concentrations (MIC) ranging between 50 and 63 μg/ml. Compounds 1–5 displayed antibacterial activities against S. saprophyticus with MIC values as low as 4 μg/ml. The results inferred from this study demonstrate the potential of A. laxiflora root as a source for new anti-HIV drugs and scientifically validate the traditional use of A. laxiflora in the treatment of gastrointestinal, skin, respiratory and urinary tract related infections. These results reaffirm the ethnopharmacological significance of African traditional medicines.
- Full Text:
- Date Issued: 2018
- Authors: Ndinteh, Derek T , Olivier, Denise K , Noundou, Xavier S , Krause, Rui W M , Mnkandhla, D , Isaacs, Michelle , Hoppe, Heinrich C , Muganza, F M , Mbafor, J T , Van Vuuren, S F , Patnala, S
- Date: 2018
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/126634 , vital:35907 , https://doi.org/10.1016/j.sajb.2018.08.010
- Description: This study was designed to assess the cytotoxicity, anti-HIV and antibacterial efficacy of various solvent extracts of roots, stem and leaves of Alchornea laxiflora, as well as five compounds isolated from its methanolic stem extract viz.; ellagic acid (1); 3-O-methyl-ellagic acid (2), 3-O-β-d-glucopyranosyl-β-sitosterol (3), 3-O-acetyl-oleanolic acid (4) and 3-O-acetyl-ursolic acid (5). The tested crude extracts were prepared from several solvent polarities including: hexane (Hex), chloroform (CHCl3), ethyl acetate (EtOAc), ethanol (EtOH), methanol (MeOH) and water (H2O). The anti-HIV properties were assessed on HIV-1 subtype C integrase while the cytotoxicity was tested against Hela cells. The antibacterial activity was studied on a panel of pathogens including gastrointestinal, skin, respiratory and urinary-tract infection causing Gram positive bacteria viz.; Bacillus cereus (ATCC 11778), Enterococcus faecalis (ATCC 29212), Staphylococcus aureus (ATCC 25923) and Staphylococcus saprophyticus (ATCC 15305)] and Gram-negative bacteria, i.e., Escherichia coli (ATCC 25922), Klebsiella pneumoniae (ATCC 13883), Moraxella catarrhalis (ATCC 23246). All the tested samples were determined to be non-toxic due to the low inhibitions observed. The most potent anti-HIV activity was observed for the methanolic extract of A. laxiflora root (ALR4) with an IC50 value of 0.21 ng/ml, which was more active than chicoric acid used as reference drug (6.82 nM). Roots, stem and leaves of A. laxiflora extracts exhibited antibacterial activities against most of the Gram-positive bacteria with the minimum inhibitory concentrations (MIC) ranging between 50 and 63 μg/ml. Compounds 1–5 displayed antibacterial activities against S. saprophyticus with MIC values as low as 4 μg/ml. The results inferred from this study demonstrate the potential of A. laxiflora root as a source for new anti-HIV drugs and scientifically validate the traditional use of A. laxiflora in the treatment of gastrointestinal, skin, respiratory and urinary tract related infections. These results reaffirm the ethnopharmacological significance of African traditional medicines.
- Full Text:
- Date Issued: 2018
Biological control of Salvinia molesta in South Africa revisited
- Martin, Grant D, Coetzee, Julie A, Weyl, Philip S R, Parkinson, Matthew C, Hill, Martin P
- Authors: Martin, Grant D , Coetzee, Julie A , Weyl, Philip S R , Parkinson, Matthew C , Hill, Martin P
- Date: 2018
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/103878 , vital:32318 , https://doi.org/10.1016/j.biocontrol.2018.06.011
- Description: The aquatic weed Salvinia molesta D.S. Mitch. (Salviniaceae) was first recorded in South Africa in the early 1900s, and by the 1960s was regarded as one of South Africa’s worst aquatic weeds. Following the release of the weevil, Cyrtobagous salviniae Calder and Sands (Coleoptera: Curculionidae) in 1985, the weed is now considered under successful biological control. However, the post-release evaluation of this biological control programme has been ad hoc, therefore, to assess the efficacy of the agent, annual quantitative surveys of South African freshwater systems have been undertaken since 2008. Over the last ten years, of the 57 S. molesta sites visited annually in South Africa, the weevil has established at all of them. Eighteen sites are under successful biological control, where the weed no longer poses a threat to the system and 19 are under substantial biological control, where biological control has reduced the impact of the weed. Since 2008, the average percentage weed cover at sites has declined significantly from 51–100% cover to 0–5% cover in 2017 (R2 = 0.78; P < 0.05). Observations of site-specific characteristics suggest that biological control is most effective at small sites and more difficult at larger and shaded sites. Our findings show that S. molesta remains under good biological control in South Africa, however, some sites require intermittent strategic management, such as augmentative releases of C. salviniae.
- Full Text:
- Date Issued: 2018
- Authors: Martin, Grant D , Coetzee, Julie A , Weyl, Philip S R , Parkinson, Matthew C , Hill, Martin P
- Date: 2018
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/103878 , vital:32318 , https://doi.org/10.1016/j.biocontrol.2018.06.011
- Description: The aquatic weed Salvinia molesta D.S. Mitch. (Salviniaceae) was first recorded in South Africa in the early 1900s, and by the 1960s was regarded as one of South Africa’s worst aquatic weeds. Following the release of the weevil, Cyrtobagous salviniae Calder and Sands (Coleoptera: Curculionidae) in 1985, the weed is now considered under successful biological control. However, the post-release evaluation of this biological control programme has been ad hoc, therefore, to assess the efficacy of the agent, annual quantitative surveys of South African freshwater systems have been undertaken since 2008. Over the last ten years, of the 57 S. molesta sites visited annually in South Africa, the weevil has established at all of them. Eighteen sites are under successful biological control, where the weed no longer poses a threat to the system and 19 are under substantial biological control, where biological control has reduced the impact of the weed. Since 2008, the average percentage weed cover at sites has declined significantly from 51–100% cover to 0–5% cover in 2017 (R2 = 0.78; P < 0.05). Observations of site-specific characteristics suggest that biological control is most effective at small sites and more difficult at larger and shaded sites. Our findings show that S. molesta remains under good biological control in South Africa, however, some sites require intermittent strategic management, such as augmentative releases of C. salviniae.
- Full Text:
- Date Issued: 2018
Biophysical monitoring of unphosphorylated STAT3 homodimerization
- Mtwebana, Sinethemba Siphokazi
- Authors: Mtwebana, Sinethemba Siphokazi
- Date: 2018
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/63957 , vital:28514
- Description: Expected release date-April 2020
- Full Text:
- Date Issued: 2018
- Authors: Mtwebana, Sinethemba Siphokazi
- Date: 2018
- Language: English
- Type: text , Thesis , Masters , MSc
- Identifier: http://hdl.handle.net/10962/63957 , vital:28514
- Description: Expected release date-April 2020
- Full Text:
- Date Issued: 2018
Bioprospecting for amylases, cellulases and xylanases from ericoid associated fungi, their production and characterisation for the bio-economy
- Authors: Adeoyo, Olusegun Richard
- Date: 2018
- Subjects: Mycorrhizal fungi , Hydrolases , Ericaceae South Africa , Ericaceae Molecular aspects
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10962/64327 , vital:28533
- Description: South Africa is one of the most productive areas for ericaceous plants with about 850 identified species in the Cape Floral Region. The Albany Centre of Endemism where all fungi used in this study were isolated from, falls within this region. Ericaceous plants interact with some fungi via an association called the ericoid mycorrhizal (ERM) association. All fungi used in this study were isolated from roots of six ericaceous plants; Erica cerinthoides, Erica demissa, Erica chamissonis, Erica glumiflora, Erica caffra and Erica nemorosa. Fungal enzymes are known to play a significant role in the food, brewing, detergent, pharmaceutical and biofuel industries. The enzyme industry is among the major sectors of the world, and additional novel sources are being explored from time to time. This study focussed on amylases (amyloglucosidase, AMG), cellulases (endoglucanase) and xylanases (endo-1,4-P-xylanase) production from ERM fungal isolates. Out of the fifty-one (51), fungal isolates screened, ChemRU330 (Leohumicola sp.), EdRU083 and EdRU002 were among the fungi that had the highest activities of all the enzymes. They were tested for the ability to produce amylases and cellulases under different pH and nutritional conditions that included: carbon sources, nitrogen sources and metal ions, at an optimum temperature of 28°C in a modified Melin-Norkrans (MMN) liquid medium. Cellulase specific activity of 3.99, 2.18 and 4.31 (U/mg protein) for isolates EdRU083, EdRU002 and ChemRU330, respectively, was produced at an optimal pH of 5.0. For amylase, ChemRU330 had the highest specific activity of 1.11 U/mg protein while EdRU083 and EdRU02 had a specific activity of 0.80 and 0.92 U/mg protein, respectively, at the same pH with corresponding biomass yield of 113, 125 and 97 mg/50 ml, respectively. Increased enzyme activities and improved mycelial biomass production were obtained in the presence of supplements such as potassium, sodium, glucose, maltose, cellobiose, tryptone and peptone, while NaFe-EDTA and cobalt inhibited enzyme activity. ChemRU330 was selected to determine the consistency and amount of amylase, cellulase and xylanase formed after several in vitro subculturing events. AMG and endo-1,4-P-xylanase were found to have the most consistent production throughout the study period. The AMG was stable at 45oC (pH 5.0), retaining approximately 65% activity over a period of 24 h. The molecular mass of AMG and endo-1,4-P-xylanase were estimated to be 101 kDa and 72 kDa, respectively. The Km and kcat were 0.38 mg/ml and 70 s-1, respectively, using soluble starch (AMG). For endo-1,4-P-xylanase, the Km and Vmax were 0.93 mg/ml and 8.54 U/ml, respectively, using beechwood xylan (endo-1,4-P-xylanase) as substrate. Additionally, crude extracts of five root endophytes with unique morphological characteristics were screened for antibacterial properties and was followed by determination of minimum inhibitory concentration (MIC) and minimum bactericidal concentration (MBC). L. incrustata (ChemRU330) and Chaetomium sp. extracts exhibited varying degrees of inhibition against two Gram-positive and Gram-negative bacteria. The crude extract of L. incrustata was the most effective which was found to inhibit Staphylococcus aureus (MIC: 1 mg/ml), Bacillus subtilis (MIC: 2 mg/ml) and Proteus vulgaris (MIC: 16 mg/ml). The L. incrustata displayed potential for antibacterial production and could be considered as an additional source of new antimicrobial agents in drug and food preservation. Also, the three isolates used for enzyme production were identified to genus and species levels, i.e., Leohumicola incrustata (ChemRU330), Leohumicola sp. (EdRU083) and Oidiodendron sp. (EdRU002) using both ITS and Cox1 DNA regions. The molecular analysis results indicated that these ERM mycorrhizal fungi were similar to those successfully described by some researchers in South Africa and Australia. Therefore, this study opens new opportunities for exploring ERM fungal biomolecules for the bio-economy. The promising physicochemical properties, starch and xylan hydrolysis end- products, and being non-pathogenic make AMG and endo-1,4-P-xylanase potential candidates for future applications as additives in the food industry for the production of glucose, glucose syrups, high-fructose corn syrups, and as well as the production of bioethanol. Finally, the findings of this study revealed that it is possible to produce hydrolytic enzymes from ERM fungi in vitro using chemically defined media. , Thesis (PhD) -- Faculty of Science, Biochemistry and Microbiology, 2018
- Full Text:
- Date Issued: 2018
- Authors: Adeoyo, Olusegun Richard
- Date: 2018
- Subjects: Mycorrhizal fungi , Hydrolases , Ericaceae South Africa , Ericaceae Molecular aspects
- Language: English
- Type: Doctoral theses , text
- Identifier: http://hdl.handle.net/10962/64327 , vital:28533
- Description: South Africa is one of the most productive areas for ericaceous plants with about 850 identified species in the Cape Floral Region. The Albany Centre of Endemism where all fungi used in this study were isolated from, falls within this region. Ericaceous plants interact with some fungi via an association called the ericoid mycorrhizal (ERM) association. All fungi used in this study were isolated from roots of six ericaceous plants; Erica cerinthoides, Erica demissa, Erica chamissonis, Erica glumiflora, Erica caffra and Erica nemorosa. Fungal enzymes are known to play a significant role in the food, brewing, detergent, pharmaceutical and biofuel industries. The enzyme industry is among the major sectors of the world, and additional novel sources are being explored from time to time. This study focussed on amylases (amyloglucosidase, AMG), cellulases (endoglucanase) and xylanases (endo-1,4-P-xylanase) production from ERM fungal isolates. Out of the fifty-one (51), fungal isolates screened, ChemRU330 (Leohumicola sp.), EdRU083 and EdRU002 were among the fungi that had the highest activities of all the enzymes. They were tested for the ability to produce amylases and cellulases under different pH and nutritional conditions that included: carbon sources, nitrogen sources and metal ions, at an optimum temperature of 28°C in a modified Melin-Norkrans (MMN) liquid medium. Cellulase specific activity of 3.99, 2.18 and 4.31 (U/mg protein) for isolates EdRU083, EdRU002 and ChemRU330, respectively, was produced at an optimal pH of 5.0. For amylase, ChemRU330 had the highest specific activity of 1.11 U/mg protein while EdRU083 and EdRU02 had a specific activity of 0.80 and 0.92 U/mg protein, respectively, at the same pH with corresponding biomass yield of 113, 125 and 97 mg/50 ml, respectively. Increased enzyme activities and improved mycelial biomass production were obtained in the presence of supplements such as potassium, sodium, glucose, maltose, cellobiose, tryptone and peptone, while NaFe-EDTA and cobalt inhibited enzyme activity. ChemRU330 was selected to determine the consistency and amount of amylase, cellulase and xylanase formed after several in vitro subculturing events. AMG and endo-1,4-P-xylanase were found to have the most consistent production throughout the study period. The AMG was stable at 45oC (pH 5.0), retaining approximately 65% activity over a period of 24 h. The molecular mass of AMG and endo-1,4-P-xylanase were estimated to be 101 kDa and 72 kDa, respectively. The Km and kcat were 0.38 mg/ml and 70 s-1, respectively, using soluble starch (AMG). For endo-1,4-P-xylanase, the Km and Vmax were 0.93 mg/ml and 8.54 U/ml, respectively, using beechwood xylan (endo-1,4-P-xylanase) as substrate. Additionally, crude extracts of five root endophytes with unique morphological characteristics were screened for antibacterial properties and was followed by determination of minimum inhibitory concentration (MIC) and minimum bactericidal concentration (MBC). L. incrustata (ChemRU330) and Chaetomium sp. extracts exhibited varying degrees of inhibition against two Gram-positive and Gram-negative bacteria. The crude extract of L. incrustata was the most effective which was found to inhibit Staphylococcus aureus (MIC: 1 mg/ml), Bacillus subtilis (MIC: 2 mg/ml) and Proteus vulgaris (MIC: 16 mg/ml). The L. incrustata displayed potential for antibacterial production and could be considered as an additional source of new antimicrobial agents in drug and food preservation. Also, the three isolates used for enzyme production were identified to genus and species levels, i.e., Leohumicola incrustata (ChemRU330), Leohumicola sp. (EdRU083) and Oidiodendron sp. (EdRU002) using both ITS and Cox1 DNA regions. The molecular analysis results indicated that these ERM mycorrhizal fungi were similar to those successfully described by some researchers in South Africa and Australia. Therefore, this study opens new opportunities for exploring ERM fungal biomolecules for the bio-economy. The promising physicochemical properties, starch and xylan hydrolysis end- products, and being non-pathogenic make AMG and endo-1,4-P-xylanase potential candidates for future applications as additives in the food industry for the production of glucose, glucose syrups, high-fructose corn syrups, and as well as the production of bioethanol. Finally, the findings of this study revealed that it is possible to produce hydrolytic enzymes from ERM fungi in vitro using chemically defined media. , Thesis (PhD) -- Faculty of Science, Biochemistry and Microbiology, 2018
- Full Text:
- Date Issued: 2018
Biotic and abiotic drivers of macroinvertebrate assemblages in a South African river
- Authors: Bellingan, Terence Andrew
- Date: 2018
- Subjects: Aquatic insects -- South Africa -- Eastern Cape , Stream ecology -- South Africa -- Eastern Cape , Freshwater ecology -- South Africa -- Eastern Cape , Riparian areas -- Management , Ecosystem management -- South Africa -- Eastern Cape , Mayflies -- South Africa -- Eastern Cape , Stoneflies -- South Africa -- Eastern Cape , Keiskamma River
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/61839 , vital:28067
- Description: Aquatic insects are the most numerically abundant and diverse group of organisms found in lotic ecosystems in South Africa and the world over. They play vital roles in freshwater ecosystem functioning, processing nutrients and in turn forming integral links in stream food-webs. This thesis focussed on examining the macroinvertebrate fauna within three reaches of headwater streams of the Keiskamma River system: reaches that were considered to be fishless; reaches that were invaded by non-native salmonid species; and reaches that were dominated by native fish. I described the effects of predatory fish presence through detailed examination of macroinvertebrate assemblage composition; macroinvertebrate drift timing and density; and through niche utilisation determined from stable isotope data. Patterns in the macroinvertebrate assemblages of the headwaters of the Keiskamma River appear to be driven more strongly by flow rate and seasonal influences, but fish presence and biotope availability were also significant drivers. Niche shifts due to predator presence were not easy to detect and, while patterns of influence may have been evident, they were not found to be significant. However, I demonstrated that salmonids selectively feed on native fish species when the opportunity is presented, occupying significantly higher trophic levels when co-occurring with native fish than in invaded reaches where native fish are absent. Drift timing and density were demonstrated to be significantly different between reach for specific macroinvertebrate species from the Ephemeroptera and Plecoptera, under differing fish predation regimes, in agreement with what has been observed from studies in rivers elsewhere. In freshwater ecosystems of South Africa and worldwide, mitigation of negative effects of alien fishes through their removal using piscicides may also affect non-target organisms. To better understand the effects of just such a removal operation, employed for the first time in the history of freshwater conservation in South Africa, macroinvertebrate communities were assessed for non-target effects of rotenone. The fish eradication operations were demonstrated to have a short-term negative effect on the macroinvertebrate assemblage, through water quality index measurements and alteration of densities of macroinvertebrate taxa collected from stone surfaces. However, no long-term detrimental impact was observed as macroinvertebrate faunas returned to a comparable pre-treatment state within a year of each rotenone application.
- Full Text:
- Date Issued: 2018
- Authors: Bellingan, Terence Andrew
- Date: 2018
- Subjects: Aquatic insects -- South Africa -- Eastern Cape , Stream ecology -- South Africa -- Eastern Cape , Freshwater ecology -- South Africa -- Eastern Cape , Riparian areas -- Management , Ecosystem management -- South Africa -- Eastern Cape , Mayflies -- South Africa -- Eastern Cape , Stoneflies -- South Africa -- Eastern Cape , Keiskamma River
- Language: English
- Type: text , Thesis , Doctoral , PhD
- Identifier: http://hdl.handle.net/10962/61839 , vital:28067
- Description: Aquatic insects are the most numerically abundant and diverse group of organisms found in lotic ecosystems in South Africa and the world over. They play vital roles in freshwater ecosystem functioning, processing nutrients and in turn forming integral links in stream food-webs. This thesis focussed on examining the macroinvertebrate fauna within three reaches of headwater streams of the Keiskamma River system: reaches that were considered to be fishless; reaches that were invaded by non-native salmonid species; and reaches that were dominated by native fish. I described the effects of predatory fish presence through detailed examination of macroinvertebrate assemblage composition; macroinvertebrate drift timing and density; and through niche utilisation determined from stable isotope data. Patterns in the macroinvertebrate assemblages of the headwaters of the Keiskamma River appear to be driven more strongly by flow rate and seasonal influences, but fish presence and biotope availability were also significant drivers. Niche shifts due to predator presence were not easy to detect and, while patterns of influence may have been evident, they were not found to be significant. However, I demonstrated that salmonids selectively feed on native fish species when the opportunity is presented, occupying significantly higher trophic levels when co-occurring with native fish than in invaded reaches where native fish are absent. Drift timing and density were demonstrated to be significantly different between reach for specific macroinvertebrate species from the Ephemeroptera and Plecoptera, under differing fish predation regimes, in agreement with what has been observed from studies in rivers elsewhere. In freshwater ecosystems of South Africa and worldwide, mitigation of negative effects of alien fishes through their removal using piscicides may also affect non-target organisms. To better understand the effects of just such a removal operation, employed for the first time in the history of freshwater conservation in South Africa, macroinvertebrate communities were assessed for non-target effects of rotenone. The fish eradication operations were demonstrated to have a short-term negative effect on the macroinvertebrate assemblage, through water quality index measurements and alteration of densities of macroinvertebrate taxa collected from stone surfaces. However, no long-term detrimental impact was observed as macroinvertebrate faunas returned to a comparable pre-treatment state within a year of each rotenone application.
- Full Text:
- Date Issued: 2018
Bird responses to land use change: Guild diversity in a Kenyan coastal forest and adjoining habitats
- Chiawo, David O, Kombe, Wellington N, Craig, Adrian J F K
- Authors: Chiawo, David O , Kombe, Wellington N , Craig, Adrian J F K
- Date: 2018
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/448820 , vital:74763 , https://doi.org/10.1080/01584197.2018.1431052
- Description: Land use change can have profound effects on forest ecology, particularly on the avian community. Arabuko-Sokoke Forest, one of the Important Bird Areas (IBAs) in Kenya, is under threat due to ongoing land use change in the surroundings that could affect species composition of many bird guilds. However, information on the response of different guilds in tropical land use systems is sparse in Africa. We examined the effects of land use on bird guilds in primary forest (Arabuko-Sokoke Forest), adjoining plantations, and neighbouring farmland. Point counts were distributed equally in the three land use systems to survey bird populations. A total of 2600 bird observations was recorded, representing 97 species in five main feeding guilds (frugivores, nectarivores, insectivores, carnivores, and granivores). Granivores were most abundant and diverse in farmland, while carnivores (primarily raptors) utilised all habitats. Insectivores were most diverse in primary forest where vertical heterogeneity of the vegetation and the presence of large fruiting trees significantly influenced their occurrence. Specialist nectarivores were most frequent in primary forest, whereas occasional nectarivores were less abundant there. Contrary to expectation, frugivore diversity showed no significant effect of land use.
- Full Text:
- Date Issued: 2018
Bird responses to land use change: Guild diversity in a Kenyan coastal forest and adjoining habitats
- Authors: Chiawo, David O , Kombe, Wellington N , Craig, Adrian J F K
- Date: 2018
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/448820 , vital:74763 , https://doi.org/10.1080/01584197.2018.1431052
- Description: Land use change can have profound effects on forest ecology, particularly on the avian community. Arabuko-Sokoke Forest, one of the Important Bird Areas (IBAs) in Kenya, is under threat due to ongoing land use change in the surroundings that could affect species composition of many bird guilds. However, information on the response of different guilds in tropical land use systems is sparse in Africa. We examined the effects of land use on bird guilds in primary forest (Arabuko-Sokoke Forest), adjoining plantations, and neighbouring farmland. Point counts were distributed equally in the three land use systems to survey bird populations. A total of 2600 bird observations was recorded, representing 97 species in five main feeding guilds (frugivores, nectarivores, insectivores, carnivores, and granivores). Granivores were most abundant and diverse in farmland, while carnivores (primarily raptors) utilised all habitats. Insectivores were most diverse in primary forest where vertical heterogeneity of the vegetation and the presence of large fruiting trees significantly influenced their occurrence. Specialist nectarivores were most frequent in primary forest, whereas occasional nectarivores were less abundant there. Contrary to expectation, frugivore diversity showed no significant effect of land use.
- Full Text:
- Date Issued: 2018
Black South African men’s adjustment to divorce: a divorce-stress-adjustment model
- Muchena, Kudakwashe Christopher
- Authors: Muchena, Kudakwashe Christopher
- Date: 2018
- Subjects: Divorce -- Psychological aspects , Social psychology Men -- Psychology
- Language: English
- Type: Thesis , Doctoral , DPhil
- Identifier: http://hdl.handle.net/10948/50121 , vital:42048
- Description: The decision to divorce marks a turning point for each individual involved. It can be viewed as more than just a legal process. From a psychological perspective, it does not matter who initiated the divorce, it always comes with emotional ramifications for all those involved. Statistically there is a high rate of divorce in South Africa and there have been significant shifts in trends over time. However, black South African men’s experience of, action in, and adjustment to divorce has been relatively neglected in the divorce research, yet it is important for understanding contemporary social arrangements and processes, as well as for broadening the understanding of black South African men’s lives. How black South African men describe their situations and respond to marital dissolution may point to their positions in the gender-structured community and to how they interpret the nature of social practice, marriages, divorce and their position in society. The present study aimed at exploring black South African men’s experience of, and adjustment to, divorce. More specifically, the study developed a divorce-stress-adjustment model for divorced black South African men. The theoretical framework underpinning this study was that of Symbolic Interactionism that was complemented and enhanced by Erikson’s Psychosocial Theory, focusing specifically on identity development in adulthood. This was a qualitative study using an Interpretative Phenomenological Analysis (IPA) as both the research design and data analytic theory and process. The eight participants were volunteers who were recruited purposively. In accordance with IPA guidelines, data for the study was collected using biographical questionnaires and semi-structured interviews. The emerging themes were grouped into four superordinate themes, that is, pre-divorce experiences, experiencing divorce, adjustment process and post-divorce experience. Each superordinate theme had corresponding subordinate themes and subthemes. The themes were then used to develop the divorce-stress adjustment model indicating that the experience of divorce is an interconnected process. Weed’s recommendations for interpretative synthesis of interview data were used.
- Full Text:
- Date Issued: 2018
- Authors: Muchena, Kudakwashe Christopher
- Date: 2018
- Subjects: Divorce -- Psychological aspects , Social psychology Men -- Psychology
- Language: English
- Type: Thesis , Doctoral , DPhil
- Identifier: http://hdl.handle.net/10948/50121 , vital:42048
- Description: The decision to divorce marks a turning point for each individual involved. It can be viewed as more than just a legal process. From a psychological perspective, it does not matter who initiated the divorce, it always comes with emotional ramifications for all those involved. Statistically there is a high rate of divorce in South Africa and there have been significant shifts in trends over time. However, black South African men’s experience of, action in, and adjustment to divorce has been relatively neglected in the divorce research, yet it is important for understanding contemporary social arrangements and processes, as well as for broadening the understanding of black South African men’s lives. How black South African men describe their situations and respond to marital dissolution may point to their positions in the gender-structured community and to how they interpret the nature of social practice, marriages, divorce and their position in society. The present study aimed at exploring black South African men’s experience of, and adjustment to, divorce. More specifically, the study developed a divorce-stress-adjustment model for divorced black South African men. The theoretical framework underpinning this study was that of Symbolic Interactionism that was complemented and enhanced by Erikson’s Psychosocial Theory, focusing specifically on identity development in adulthood. This was a qualitative study using an Interpretative Phenomenological Analysis (IPA) as both the research design and data analytic theory and process. The eight participants were volunteers who were recruited purposively. In accordance with IPA guidelines, data for the study was collected using biographical questionnaires and semi-structured interviews. The emerging themes were grouped into four superordinate themes, that is, pre-divorce experiences, experiencing divorce, adjustment process and post-divorce experience. Each superordinate theme had corresponding subordinate themes and subthemes. The themes were then used to develop the divorce-stress adjustment model indicating that the experience of divorce is an interconnected process. Weed’s recommendations for interpretative synthesis of interview data were used.
- Full Text:
- Date Issued: 2018
Black South African men’s adjustment to divorce: a divorce-stress-adjustment model
- Muchena, Christopher Kudakwashe
- Authors: Muchena, Christopher Kudakwashe
- Date: 2018
- Subjects: Divorced men -- Psychological aspects , Adjustment (Psychology)
- Language: English
- Type: Thesis , Doctoral , DPhil
- Identifier: http://hdl.handle.net/10948/17933 , vital:28543
- Description: The decision to divorce marks a turning point for each individual involved. It can be viewed as more than just a legal process. From a psychological perspective, it does not matter who initiated the divorce, it always comes with emotional ramifications for all those involved. Statistically there is a high rate of divorce in South Africa and there have been significant shifts in trends over time. However, black South African men’s experience of, action in, and adjustment to divorce has been relatively neglected in the divorce research, yet it is important for understanding contemporary social arrangements and processes, as well as for broadening the understanding of black South African men’s lives. How black South African men describe their situations and respond to marital dissolution may point to their positions in the gender-structured community and to how they interpret the nature of social practice, marriages, divorce and their position in society. The present study aimed at exploring black South African men’s experience of, and adjustment to, divorce. More specifically, the study developed a divorce-stress-adjustment model for divorced black South African men. The theoretical framework underpinning this study was that of Symbolic Interactionism that was complemented and enhanced by Erikson’s Psychosocial Theory, focusing specifically on identity development in adulthood. This was a qualitative study using an Interpretative Phenomenological Analysis (IPA) as both the research design and data analytic theory and process. The eight participants were volunteers who were recruited purposively. In accordance with IPA guidelines, data for the study was collected using biographical questionnaires and semi-structured interviews. The emerging themes were grouped into four superordinate themes, that is, pre-divorce experiences, experiencing divorce, adjustment process and post-divorce experience. Each superordinate theme had corresponding subordinate themes and subthemes. The themes were then used to develop the divorce-stress-adjustment model indicating that the experience of divorce is an interconnected process. Weed’s recommendations for interpretative synthesis of interview data were used.
- Full Text:
- Date Issued: 2018
- Authors: Muchena, Christopher Kudakwashe
- Date: 2018
- Subjects: Divorced men -- Psychological aspects , Adjustment (Psychology)
- Language: English
- Type: Thesis , Doctoral , DPhil
- Identifier: http://hdl.handle.net/10948/17933 , vital:28543
- Description: The decision to divorce marks a turning point for each individual involved. It can be viewed as more than just a legal process. From a psychological perspective, it does not matter who initiated the divorce, it always comes with emotional ramifications for all those involved. Statistically there is a high rate of divorce in South Africa and there have been significant shifts in trends over time. However, black South African men’s experience of, action in, and adjustment to divorce has been relatively neglected in the divorce research, yet it is important for understanding contemporary social arrangements and processes, as well as for broadening the understanding of black South African men’s lives. How black South African men describe their situations and respond to marital dissolution may point to their positions in the gender-structured community and to how they interpret the nature of social practice, marriages, divorce and their position in society. The present study aimed at exploring black South African men’s experience of, and adjustment to, divorce. More specifically, the study developed a divorce-stress-adjustment model for divorced black South African men. The theoretical framework underpinning this study was that of Symbolic Interactionism that was complemented and enhanced by Erikson’s Psychosocial Theory, focusing specifically on identity development in adulthood. This was a qualitative study using an Interpretative Phenomenological Analysis (IPA) as both the research design and data analytic theory and process. The eight participants were volunteers who were recruited purposively. In accordance with IPA guidelines, data for the study was collected using biographical questionnaires and semi-structured interviews. The emerging themes were grouped into four superordinate themes, that is, pre-divorce experiences, experiencing divorce, adjustment process and post-divorce experience. Each superordinate theme had corresponding subordinate themes and subthemes. The themes were then used to develop the divorce-stress-adjustment model indicating that the experience of divorce is an interconnected process. Weed’s recommendations for interpretative synthesis of interview data were used.
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- Date Issued: 2018
Black university students’ experiences of negotiating their social identity in a historically white university
- Authors: Mogotsi, Opelo Petunia
- Date: 2018
- Subjects: Corporate culture -- South Africa , Social integration -- South Africa , Race discrimination -- South Africa , Segregation in higher education -- South Africa , Group identity -- South Africa , College students, Black -- South Africa , Biko, Steve, 1946-1977 , Fanon, Frantz, 1925-1961
- Language: English
- Type: text , Thesis , Masters , MA
- Identifier: http://hdl.handle.net/10962/62416 , vital:28174
- Description: This thesis seeks to explore the social identity of black students in a historically white university. Since 1994, South African government has been promulgating pieces of legislation aimed at ensuring racial integration, and indirectly enforcing acculturation in historically white universities. Studies have proven that institutional cultures in historically white universities alienate and exclude black students’ identities. These students’ sense of social identity, which includes amongst others; culture, heritage, language and traditions, and consequently self-esteem and self-concept is altered in these institutions. Research has been scant regarding the shape and form that black students’ identity assume when they get to these spaces. Face to face interviews were used to collect data and thematic analysis was used for data analysis. The Social Identity and the Acculturation models were used to explore the experiences of black students in negotiating their social identities in a historically white university. Evoking Steve Biko’s analysis of ‘artificial integration’, it was illustrated how the ‘integration’ narrative sought to discard the identity of black students and psychologically enforce a simulation of black students into white established identities. The main themes discussed indicated that black students in this study had social identity and identity challenges in a historically white university. This study has implications for policy development as I hope to theoretically sensitize historically white universities to (apart from mere opening of spaces of learning) understand the social identity challenges of black students.
- Full Text:
- Date Issued: 2018
- Authors: Mogotsi, Opelo Petunia
- Date: 2018
- Subjects: Corporate culture -- South Africa , Social integration -- South Africa , Race discrimination -- South Africa , Segregation in higher education -- South Africa , Group identity -- South Africa , College students, Black -- South Africa , Biko, Steve, 1946-1977 , Fanon, Frantz, 1925-1961
- Language: English
- Type: text , Thesis , Masters , MA
- Identifier: http://hdl.handle.net/10962/62416 , vital:28174
- Description: This thesis seeks to explore the social identity of black students in a historically white university. Since 1994, South African government has been promulgating pieces of legislation aimed at ensuring racial integration, and indirectly enforcing acculturation in historically white universities. Studies have proven that institutional cultures in historically white universities alienate and exclude black students’ identities. These students’ sense of social identity, which includes amongst others; culture, heritage, language and traditions, and consequently self-esteem and self-concept is altered in these institutions. Research has been scant regarding the shape and form that black students’ identity assume when they get to these spaces. Face to face interviews were used to collect data and thematic analysis was used for data analysis. The Social Identity and the Acculturation models were used to explore the experiences of black students in negotiating their social identities in a historically white university. Evoking Steve Biko’s analysis of ‘artificial integration’, it was illustrated how the ‘integration’ narrative sought to discard the identity of black students and psychologically enforce a simulation of black students into white established identities. The main themes discussed indicated that black students in this study had social identity and identity challenges in a historically white university. This study has implications for policy development as I hope to theoretically sensitize historically white universities to (apart from mere opening of spaces of learning) understand the social identity challenges of black students.
- Full Text:
- Date Issued: 2018
Black woman you’re on your own
- Authors: Ngada, Unathi Ndlelantle
- Date: 2018
- Subjects: Creative writing (Higher education) -- South Africa , South African fiction (English) -- 21st century , Short stories, South African (English) -- 21st century
- Language: English
- Type: text , Thesis , Masters , MA
- Identifier: http://hdl.handle.net/10962/63110 , vital:28364
- Full Text:
- Date Issued: 2018
- Authors: Ngada, Unathi Ndlelantle
- Date: 2018
- Subjects: Creative writing (Higher education) -- South Africa , South African fiction (English) -- 21st century , Short stories, South African (English) -- 21st century
- Language: English
- Type: text , Thesis , Masters , MA
- Identifier: http://hdl.handle.net/10962/63110 , vital:28364
- Full Text:
- Date Issued: 2018
Black women’s narratives of womanhood: before and after hysterectomy
- Kota-Nyati, Phumeza Patricia
- Authors: Kota-Nyati, Phumeza Patricia
- Date: 2018
- Subjects: Hysterectomy -- psychological aspects , Women -- psychological aspects Gender identity Intersectionality (Sociology)
- Language: English
- Type: Thesis , Doctoral , DPhil
- Identifier: http://hdl.handle.net/10948/29995 , vital:30807
- Description: The removal of the uterus, medically referred to as a hysterectomy, is a permanent and irreversible procedure that potentially results in a number of immediate and significant effects. Performing a hysterectomy is at times the only medical option to a long and traumatic history of pelvic pains and surgeries. The decision to undergo this very costly, painful, and life-changing procedure can have an influence on the way women view themselves. Women’s narratives of womanhood before and after hysterectomy need to be understood within the context of women’s socially constructed identities. Gendered identity has been closely linked to genital and/or reproductive organs and the removal of these organs may influence the way women and societies define womanhood.The interpretive paradigm of constructionism with a narrative inquiry design was used as the lens to examine the women’s experiences. In-depth interviews were analysed through thematic analysis. The findings of this research revealed negative experiences resulting from severe symptoms before hysterectomy, exposed multi-layered structures of power and dominance during treatment, and indicated positive outcomes of hysterectomy. The findings should inform medical and allied practitioners regarding hysterectomy as a treatment option and add to the theoretical debate on the relationships between hysterectomy, womanhood, and identity.
- Full Text:
- Date Issued: 2018
- Authors: Kota-Nyati, Phumeza Patricia
- Date: 2018
- Subjects: Hysterectomy -- psychological aspects , Women -- psychological aspects Gender identity Intersectionality (Sociology)
- Language: English
- Type: Thesis , Doctoral , DPhil
- Identifier: http://hdl.handle.net/10948/29995 , vital:30807
- Description: The removal of the uterus, medically referred to as a hysterectomy, is a permanent and irreversible procedure that potentially results in a number of immediate and significant effects. Performing a hysterectomy is at times the only medical option to a long and traumatic history of pelvic pains and surgeries. The decision to undergo this very costly, painful, and life-changing procedure can have an influence on the way women view themselves. Women’s narratives of womanhood before and after hysterectomy need to be understood within the context of women’s socially constructed identities. Gendered identity has been closely linked to genital and/or reproductive organs and the removal of these organs may influence the way women and societies define womanhood.The interpretive paradigm of constructionism with a narrative inquiry design was used as the lens to examine the women’s experiences. In-depth interviews were analysed through thematic analysis. The findings of this research revealed negative experiences resulting from severe symptoms before hysterectomy, exposed multi-layered structures of power and dominance during treatment, and indicated positive outcomes of hysterectomy. The findings should inform medical and allied practitioners regarding hysterectomy as a treatment option and add to the theoretical debate on the relationships between hysterectomy, womanhood, and identity.
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- Date Issued: 2018
Black, white and everything in-between: Unravelling the times with Zoë Wicomb
- Authors: Phiri, Aretha
- Date: 2018
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/458474 , vital:75747 , https://hdl.handle.net/10520/EJC-1061dd5e30
- Description: Born in Namaqualand in the Western Cape in 1948, Zoë Wicomb is one of South Africa’s most accomplished and celebrated writers. With five published works of fiction, including two short story collections, and a body of critical scholarly essays to her name to date, she is an indisputable part of the South African English literary canon. Her fiction, which is typically taught in secondary and tertiary educational institutions and is the focus of considerable academic study, forms an intricate, if provocative, part of the South African literary landscape.
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- Date Issued: 2018
- Authors: Phiri, Aretha
- Date: 2018
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/458474 , vital:75747 , https://hdl.handle.net/10520/EJC-1061dd5e30
- Description: Born in Namaqualand in the Western Cape in 1948, Zoë Wicomb is one of South Africa’s most accomplished and celebrated writers. With five published works of fiction, including two short story collections, and a body of critical scholarly essays to her name to date, she is an indisputable part of the South African English literary canon. Her fiction, which is typically taught in secondary and tertiary educational institutions and is the focus of considerable academic study, forms an intricate, if provocative, part of the South African literary landscape.
- Full Text:
- Date Issued: 2018
Blending problem-based learning and peer-led team learning, in an open ended ‘home-grown’pharmaceutical chemistry case study
- Sewry, Joyce D, Veale, Clinton G L, Krause, Rui W M
- Authors: Sewry, Joyce D , Veale, Clinton G L , Krause, Rui W M
- Date: 2018
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/125691 , vital:35809 , https://doi.org/10.1039/C7RP00180K
- Description: Pharmaceutical chemistry, medicinal chemistry and the drug discovery process require experienced practitioners to employ reasoned speculation in generating creative ideas, which can be used to evolve promising molecules into drugs. The ever-evolving world of pharmaceutical chemistry requires university curricula that prepare graduates for their role as designers with the capability of applying complex concepts in pharmaceutical chemistry, thereby improving the decision-making process. Common methods of teaching drug discovery, including the linear nature of the traditional case study model, do not provide a realistic picture of the underlying complexity of the process, nor do they equip students with the appropriate tools for personal sense making and abstraction. In this work, we discuss the creation of an open-ended, nonlinear case study for 3rd year pharmaceutical chemistry students, developed from drug discovery research conducted at Rhodes University. Furthermore, we discuss blending problem based learning (PBL) with peer-led team learning (PLTL) in the context of curriculum transformation, underpinned by the theory of semantic waves, to assist students in the early attainment of abstract concepts and answer questions of contextualisation, personal sense making, relatability, relevance and ultimately the skills for lifelong learning.
- Full Text:
- Date Issued: 2018
- Authors: Sewry, Joyce D , Veale, Clinton G L , Krause, Rui W M
- Date: 2018
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/125691 , vital:35809 , https://doi.org/10.1039/C7RP00180K
- Description: Pharmaceutical chemistry, medicinal chemistry and the drug discovery process require experienced practitioners to employ reasoned speculation in generating creative ideas, which can be used to evolve promising molecules into drugs. The ever-evolving world of pharmaceutical chemistry requires university curricula that prepare graduates for their role as designers with the capability of applying complex concepts in pharmaceutical chemistry, thereby improving the decision-making process. Common methods of teaching drug discovery, including the linear nature of the traditional case study model, do not provide a realistic picture of the underlying complexity of the process, nor do they equip students with the appropriate tools for personal sense making and abstraction. In this work, we discuss the creation of an open-ended, nonlinear case study for 3rd year pharmaceutical chemistry students, developed from drug discovery research conducted at Rhodes University. Furthermore, we discuss blending problem based learning (PBL) with peer-led team learning (PLTL) in the context of curriculum transformation, underpinned by the theory of semantic waves, to assist students in the early attainment of abstract concepts and answer questions of contextualisation, personal sense making, relatability, relevance and ultimately the skills for lifelong learning.
- Full Text:
- Date Issued: 2018
Blue ring of fire
- Authors: O’Flaherty, Craig
- Date: 2018
- Subjects: Creative writing (Higher education) -- South Africa , South African poetry (English) -- 21st century
- Language: English
- Type: text , Thesis , Masters , MA
- Identifier: http://hdl.handle.net/10962/63615 , vital:28448
- Description: My poems are reflections of shape, colour and emotions expressed through imagery. Their unsentimental landscape-realism echo my own feelings as well as broader human dimensions of contradiction and uncertainty, without trying to resolve them. In the same way that photography is the art of 'painting with light', my poems seek a language that evokes light and darkness. They aspire to what Keats said when writing about ‘negative capability’: “Poetical character has no self, it is anything and nothing, it has no character and enjoys light and shade”. My poems explore what I have learned about form – how line-length, syntax and musicality can add grace and energy to language. Poets that have influenced me include the classical Chinese poets such as Du Fu and Li Po, and the Generation of 27 Spanish poets, such as Antonio Machado and Leon Felipe.
- Full Text:
- Date Issued: 2018
- Authors: O’Flaherty, Craig
- Date: 2018
- Subjects: Creative writing (Higher education) -- South Africa , South African poetry (English) -- 21st century
- Language: English
- Type: text , Thesis , Masters , MA
- Identifier: http://hdl.handle.net/10962/63615 , vital:28448
- Description: My poems are reflections of shape, colour and emotions expressed through imagery. Their unsentimental landscape-realism echo my own feelings as well as broader human dimensions of contradiction and uncertainty, without trying to resolve them. In the same way that photography is the art of 'painting with light', my poems seek a language that evokes light and darkness. They aspire to what Keats said when writing about ‘negative capability’: “Poetical character has no self, it is anything and nothing, it has no character and enjoys light and shade”. My poems explore what I have learned about form – how line-length, syntax and musicality can add grace and energy to language. Poets that have influenced me include the classical Chinese poets such as Du Fu and Li Po, and the Generation of 27 Spanish poets, such as Antonio Machado and Leon Felipe.
- Full Text:
- Date Issued: 2018