A comparison of genetic structure in two low-dispersal crabs from the Wild Coast, South Africa
- Qhaji, Y, Jansen van Vuuren, Bettine, Papadopoulos, Isabelle, McQuaid, Christopher D, Teske, Peter R
- Authors: Qhaji, Y , Jansen van Vuuren, Bettine , Papadopoulos, Isabelle , McQuaid, Christopher D , Teske, Peter R
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/444770 , vital:74297 , https://doi.org/10.2989/1814232X.2015.1077474
- Description: The Wild Coast in south-eastern South Africa is strongly influenced by the warm, southward-flowing Agulhas Current. This current has a significant impact on dispersal in the coastal biota of the region, and facilitates high levels of connectivity among populations. However, it is not known how the region's high-velocity hydrology affects genetic population structure in endemic estuarine species, populations of which are frequently isolated from the sea. Here, we compared genetic structure in two estuarine crabs of the family Hymenosomatidae. Both are presumed to have low dispersal potential, but they differ in terms of their life histories. Hymenosoma longicrure has abbreviated larval development and can complete its entire life cycle within estuaries, whereas Neorhynchoplax bovis is a direct developer that lacks planktonic larvae.
- Full Text:
- Date Issued: 2015
- Authors: Qhaji, Y , Jansen van Vuuren, Bettine , Papadopoulos, Isabelle , McQuaid, Christopher D , Teske, Peter R
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/444770 , vital:74297 , https://doi.org/10.2989/1814232X.2015.1077474
- Description: The Wild Coast in south-eastern South Africa is strongly influenced by the warm, southward-flowing Agulhas Current. This current has a significant impact on dispersal in the coastal biota of the region, and facilitates high levels of connectivity among populations. However, it is not known how the region's high-velocity hydrology affects genetic population structure in endemic estuarine species, populations of which are frequently isolated from the sea. Here, we compared genetic structure in two estuarine crabs of the family Hymenosomatidae. Both are presumed to have low dispersal potential, but they differ in terms of their life histories. Hymenosoma longicrure has abbreviated larval development and can complete its entire life cycle within estuaries, whereas Neorhynchoplax bovis is a direct developer that lacks planktonic larvae.
- Full Text:
- Date Issued: 2015
Contrasting signals of genetic diversity and historical demography between two recently diverged marine and estuarine fish species
- von Der Heyden, Sophie, Toms, Jessica A, Teske, Peter R, Lamberth, Stephen J, Holleman, Wouter
- Authors: von Der Heyden, Sophie , Toms, Jessica A , Teske, Peter R , Lamberth, Stephen J , Holleman, Wouter
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/445611 , vital:74407 , https://doi.org/10.3354/meps11191
- Description: Estuaries, at the confluence of marine and freshwater systems, are mostly of geologically recent origin and as such make excellent models for understanding recent speciation events. Using molecular approaches, we compared genetic diversity and demographic histories in 2 closely related southern African klipfish species, the marine Clinus superciliosus and the estuarine C. spatulatus. Strong genetic differentiation was identified using both mtDNA control region and nDNA S7 sequencing, despite some haplotype sharing. Coalescent-based modelling suggests that species divergence occurred during the Late Pleistocene or, more likely, during the Early Holocene, when present-day estuaries formed. Analyses of population demography suggest that C. superciliosus has undergone historical population expansion, whereas C. spatulatus is characterized by a population decline, potentially driven by repeated cycles of population crashes linked to the opening and closing of estuarine systems. This is also reflected in values of genetic diversity, which are almost an order of magnitude lower in the estuarine than in the marine species. Given the unique evolutionary history of C. spatulatus, a species that is restricted to only 2 South African estuaries, we highlight the need for a better understanding of the processes that have shaped the evolution of estuarine populations. The identification of unique genetic lineages in estuaries can help to better guide conservation and management efforts for some of South Africa’s most fragile habitats.
- Full Text: false
- Date Issued: 2015
- Authors: von Der Heyden, Sophie , Toms, Jessica A , Teske, Peter R , Lamberth, Stephen J , Holleman, Wouter
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/445611 , vital:74407 , https://doi.org/10.3354/meps11191
- Description: Estuaries, at the confluence of marine and freshwater systems, are mostly of geologically recent origin and as such make excellent models for understanding recent speciation events. Using molecular approaches, we compared genetic diversity and demographic histories in 2 closely related southern African klipfish species, the marine Clinus superciliosus and the estuarine C. spatulatus. Strong genetic differentiation was identified using both mtDNA control region and nDNA S7 sequencing, despite some haplotype sharing. Coalescent-based modelling suggests that species divergence occurred during the Late Pleistocene or, more likely, during the Early Holocene, when present-day estuaries formed. Analyses of population demography suggest that C. superciliosus has undergone historical population expansion, whereas C. spatulatus is characterized by a population decline, potentially driven by repeated cycles of population crashes linked to the opening and closing of estuarine systems. This is also reflected in values of genetic diversity, which are almost an order of magnitude lower in the estuarine than in the marine species. Given the unique evolutionary history of C. spatulatus, a species that is restricted to only 2 South African estuaries, we highlight the need for a better understanding of the processes that have shaped the evolution of estuarine populations. The identification of unique genetic lineages in estuaries can help to better guide conservation and management efforts for some of South Africa’s most fragile habitats.
- Full Text: false
- Date Issued: 2015
Historical demography of southern African patellid limpets: congruence of population expansions, but not phylogeography
- Mmonwa, Kolobe L, Teske, Peter R, McQuaid, Christopher D, Barker, Nigel P
- Authors: Mmonwa, Kolobe L , Teske, Peter R , McQuaid, Christopher D , Barker, Nigel P
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/444814 , vital:74300 , https://doi.org/10.2989/1814232X.2015.1009165
- Description: Global climatic oscillations have shaped the contemporary genetic structure of marine taxa in different ways. Previous demographic studies have indicated that various intertidal marine species display genetic signatures of demographic expansion that either pre- or postdate the Last Glacial Maximum. Such expansions and the ability of species to colonise new habitats will influence their genetic structure, but the link between scales of larval dispersal and the strength of phylogeographic structure is not always clear. We analysed a fragment of the mitochondrial COI gene of 11 sympatric species of intertidal southern African patellid limpets to investigate how ancient oceanographic dynamics have shaped and maintained their contemporary spatial genetic variation. Our data show that the patellid limpets investigated display congruent evidence of spatial expansion during the Late Pleistocene or Early Holocene, which corresponds with the establishment of the contemporary southern African shoreline. We argue that closely related and co-distributed southern African intertidal invertebrates responded to ancient climatic oscillations as a cohesive group. In contrast, contemporary oceanographic circulation has shaped the phylogeographic patterns of these limpets in different ways. We show close relationships between phylogeography and biogeography for some species, but not for others, despite the similarities in their life histories and exposure to the same climatic changes.
- Full Text:
- Date Issued: 2015
- Authors: Mmonwa, Kolobe L , Teske, Peter R , McQuaid, Christopher D , Barker, Nigel P
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/444814 , vital:74300 , https://doi.org/10.2989/1814232X.2015.1009165
- Description: Global climatic oscillations have shaped the contemporary genetic structure of marine taxa in different ways. Previous demographic studies have indicated that various intertidal marine species display genetic signatures of demographic expansion that either pre- or postdate the Last Glacial Maximum. Such expansions and the ability of species to colonise new habitats will influence their genetic structure, but the link between scales of larval dispersal and the strength of phylogeographic structure is not always clear. We analysed a fragment of the mitochondrial COI gene of 11 sympatric species of intertidal southern African patellid limpets to investigate how ancient oceanographic dynamics have shaped and maintained their contemporary spatial genetic variation. Our data show that the patellid limpets investigated display congruent evidence of spatial expansion during the Late Pleistocene or Early Holocene, which corresponds with the establishment of the contemporary southern African shoreline. We argue that closely related and co-distributed southern African intertidal invertebrates responded to ancient climatic oscillations as a cohesive group. In contrast, contemporary oceanographic circulation has shaped the phylogeographic patterns of these limpets in different ways. We show close relationships between phylogeography and biogeography for some species, but not for others, despite the similarities in their life histories and exposure to the same climatic changes.
- Full Text:
- Date Issued: 2015
The subspecies of Antarctic Terns (Sterna vittata) wintering on the South African coast: evidence from morphology, genetics and stable isotopes
- Connan, Maëlle, Teske, Peter R, Tree, Anthony J, Whittington, Philip A, McQuaid, Christopher D
- Authors: Connan, Maëlle , Teske, Peter R , Tree, Anthony J , Whittington, Philip A , McQuaid, Christopher D
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/444854 , vital:74303 , https://doi.org/10.1071/MU14089
- Description: Five to seven subspecies of Antarctic Tern (Sterna vittata) are recognised, with at least three (S. v. vittata, S. v. tristanensis and S. v. sanctipauli) wintering in South Africa. Morphological characters used to define these subspecies are not perfectly reliable, but fidelity to nesting site suggests they could be genetically distinct. We used morphological data and DNA to investigate the validity of subspecies. We further used stable isotope analysis of feather samples collected from the non-breeding grounds in South Africa to attempt to ascertain the population of origin. Nuclear and mitochondrial DNA sequence data identified two major genetic clades: one mostly comprised individuals partially or completely matching the morphological description of S. v. tristanensis, the other included individuals from S. v. vittata and S. v. sanctipauli. Stable isotope values indicated that juveniles originated from at least three populations. Irrespective of their morphological and genetic characteristics, most immatures moulted in Antarctic waters, and adults moulted in various habitats. Their colony of origin could not therefore be inferred from stable isotope values from feathers. Results indicate that morphological groupings may reflect a north-south cline across the Indian Ocean. Adequate conservation strategies require rigorous reassessment of the currently accepted subspecies, including DNA analyses of samples from the breeding grounds, particularly on Amsterdam and St Paul Islands.
- Full Text:
- Date Issued: 2015
- Authors: Connan, Maëlle , Teske, Peter R , Tree, Anthony J , Whittington, Philip A , McQuaid, Christopher D
- Date: 2015
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/444854 , vital:74303 , https://doi.org/10.1071/MU14089
- Description: Five to seven subspecies of Antarctic Tern (Sterna vittata) are recognised, with at least three (S. v. vittata, S. v. tristanensis and S. v. sanctipauli) wintering in South Africa. Morphological characters used to define these subspecies are not perfectly reliable, but fidelity to nesting site suggests they could be genetically distinct. We used morphological data and DNA to investigate the validity of subspecies. We further used stable isotope analysis of feather samples collected from the non-breeding grounds in South Africa to attempt to ascertain the population of origin. Nuclear and mitochondrial DNA sequence data identified two major genetic clades: one mostly comprised individuals partially or completely matching the morphological description of S. v. tristanensis, the other included individuals from S. v. vittata and S. v. sanctipauli. Stable isotope values indicated that juveniles originated from at least three populations. Irrespective of their morphological and genetic characteristics, most immatures moulted in Antarctic waters, and adults moulted in various habitats. Their colony of origin could not therefore be inferred from stable isotope values from feathers. Results indicate that morphological groupings may reflect a north-south cline across the Indian Ocean. Adequate conservation strategies require rigorous reassessment of the currently accepted subspecies, including DNA analyses of samples from the breeding grounds, particularly on Amsterdam and St Paul Islands.
- Full Text:
- Date Issued: 2015
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