An Exploration of Flow Control Using Machine Learning and Computational Fluid Dynamics
- Bradshaw, Karen L, Cornfield Matthew
- Authors: Bradshaw, Karen L , Cornfield Matthew
- Date: 2023
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/440211 , vital:73757 , xlink:href="https://doi.org/10.59200/ICARTI.2023.017"
- Description: Although numerous studies relating to computational fluid dynamics and machine learning have been conducted in relation to automotive development, the majority focus on either early development using completed 3D models, or the final testing stages of development, or machine learning accelerated computational fluid dynamic simulations. While this approach is helpful in software development and simulation, it is not easily adaptable to automotive design where the final model is constantly changing and being modified. Consequently, the aim of this study is to propose a method for conducting computational fluid dynamics and machine learning concurrently to accelerate the development process. The proposed method is used to design and improve the aerodynamic efficiency of an object. The approach focuses on developing, implementing, and comparing machine learning models capable of generating optimised three-dimensional objects with the required geometry to direct airflow paths required in applications such as pressure generation, as needed for both active and passive flow control. The study concludes that both decision tree regression and long short-term memory (LSTM) autoencoder models could be used to optimise the aerodynamic efficiency of solid bodies, but that the LSTM autoencoder performs better overall. An undesirable effect of the shape optimisation is an overall reduction in shape size as optimization increases.
- Full Text:
- Date Issued: 2023
- Authors: Bradshaw, Karen L , Cornfield Matthew
- Date: 2023
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/440211 , vital:73757 , xlink:href="https://doi.org/10.59200/ICARTI.2023.017"
- Description: Although numerous studies relating to computational fluid dynamics and machine learning have been conducted in relation to automotive development, the majority focus on either early development using completed 3D models, or the final testing stages of development, or machine learning accelerated computational fluid dynamic simulations. While this approach is helpful in software development and simulation, it is not easily adaptable to automotive design where the final model is constantly changing and being modified. Consequently, the aim of this study is to propose a method for conducting computational fluid dynamics and machine learning concurrently to accelerate the development process. The proposed method is used to design and improve the aerodynamic efficiency of an object. The approach focuses on developing, implementing, and comparing machine learning models capable of generating optimised three-dimensional objects with the required geometry to direct airflow paths required in applications such as pressure generation, as needed for both active and passive flow control. The study concludes that both decision tree regression and long short-term memory (LSTM) autoencoder models could be used to optimise the aerodynamic efficiency of solid bodies, but that the LSTM autoencoder performs better overall. An undesirable effect of the shape optimisation is an overall reduction in shape size as optimization increases.
- Full Text:
- Date Issued: 2023
Love at first bite? Pre-release surveys reveal a novel association between a native weevil and the invasive Nymphaea mexicana Zuccarini (Nymphaeaceae) in South Africa
- Reid, Megan K, Hill, Martin P, Coetzee, Julie A
- Authors: Reid, Megan K , Hill, Martin P , Coetzee, Julie A
- Date: 2023
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/416866 , vital:71392 , xlink:href="https://hdl.handle.net/10520/ejc-ento_v31_n1_a19"
- Description: Classical biological control aims to suppress alien invasive plant populations by introducing host-specific natural enemies from the native range. This relies on the assumption that invasive plant populations in the invaded range benefit from the release of natural enemies. Pre-release surveys in the invaded range are a useful way to determine if enemy release applies to a particular invasive alien plant, and to determine what other factors may contribute to the invasion. Similarly, pre-release surveys gather information that can be used to compare invaded sites before and after the release of biological control agents and may also identify whether natural enemies have been accidentally introduced into the country. Pre-release surveys were conducted in South Africa on the invasive Nymphaea mexicana Zuccarini (Nymphaeaceae) to gather such information about this species, for which a biological control programme is being developed. There was lower diversity and abundance of herbivores in the native range compared to South Africa, suggesting that N. mexicana does experience enemy release at most sites in South Africa. This support for the enemy release hypothesis justifies the investment in biological control for its management. However, a native weevil, Bagous longulus Gyllenhal (Coleoptera: Curculionidae), was found feeding and reproducing on N. mexicana at three sites, resulting in damage to the leaves and suggesting that a novel association has formed between these species. Bagous longulus may have potential to be distributed to sites of N. mexicana where it is not present, though further investigation is necessary to confirm if its host range is suitable for this to be a safe endeavour. With the exception of sites where B. longulus was present, leaf sizes were large and damage was low, and there is no evidence that any natural enemies have been accidentally introduced from the native range. Findings such as these emphasise the importance of conducting thorough surveys during the development of biological control programmes.
- Full Text:
- Date Issued: 2023
- Authors: Reid, Megan K , Hill, Martin P , Coetzee, Julie A
- Date: 2023
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/416866 , vital:71392 , xlink:href="https://hdl.handle.net/10520/ejc-ento_v31_n1_a19"
- Description: Classical biological control aims to suppress alien invasive plant populations by introducing host-specific natural enemies from the native range. This relies on the assumption that invasive plant populations in the invaded range benefit from the release of natural enemies. Pre-release surveys in the invaded range are a useful way to determine if enemy release applies to a particular invasive alien plant, and to determine what other factors may contribute to the invasion. Similarly, pre-release surveys gather information that can be used to compare invaded sites before and after the release of biological control agents and may also identify whether natural enemies have been accidentally introduced into the country. Pre-release surveys were conducted in South Africa on the invasive Nymphaea mexicana Zuccarini (Nymphaeaceae) to gather such information about this species, for which a biological control programme is being developed. There was lower diversity and abundance of herbivores in the native range compared to South Africa, suggesting that N. mexicana does experience enemy release at most sites in South Africa. This support for the enemy release hypothesis justifies the investment in biological control for its management. However, a native weevil, Bagous longulus Gyllenhal (Coleoptera: Curculionidae), was found feeding and reproducing on N. mexicana at three sites, resulting in damage to the leaves and suggesting that a novel association has formed between these species. Bagous longulus may have potential to be distributed to sites of N. mexicana where it is not present, though further investigation is necessary to confirm if its host range is suitable for this to be a safe endeavour. With the exception of sites where B. longulus was present, leaf sizes were large and damage was low, and there is no evidence that any natural enemies have been accidentally introduced from the native range. Findings such as these emphasise the importance of conducting thorough surveys during the development of biological control programmes.
- Full Text:
- Date Issued: 2023
A Sn (iv) porphyrin with mitochondria targeting properties for enhanced photodynamic activity against MCF-7 cells
- Babu, Balaji, Mack, John, Nyokong, Tebello
- Authors: Babu, Balaji , Mack, John , Nyokong, Tebello
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/230897 , vital:49829 , xlink:href="https://doi.org/10.1039/D2NJ00350C"
- Description: Two readily synthesized Sn(IV) porphyrins (SnP, SnPH) have been prepared with and without the cationic triphenylphosphonium moiety (TPP+), which have high singlet oxygen quantum yields (ca. 0.72) and long triplet state lifetimes. The Sn(IV) porphyrin with a TPP+ moiety (SnPH) exhibits favorable photodynamic activity against MCF-7 cells with IC50 values of 2.9 μM. SnPH exhibits higher cellular uptake than SnP in MCF-7 cells. A Rhodamine 123 (Rh123) assay showed that SnPH targets mitochondria and induces apoptosis by generating reactive oxygen species. The results demonstrate that this structural modification strategy merits further in-depth study.
- Full Text:
- Date Issued: 2022
- Authors: Babu, Balaji , Mack, John , Nyokong, Tebello
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/230897 , vital:49829 , xlink:href="https://doi.org/10.1039/D2NJ00350C"
- Description: Two readily synthesized Sn(IV) porphyrins (SnP, SnPH) have been prepared with and without the cationic triphenylphosphonium moiety (TPP+), which have high singlet oxygen quantum yields (ca. 0.72) and long triplet state lifetimes. The Sn(IV) porphyrin with a TPP+ moiety (SnPH) exhibits favorable photodynamic activity against MCF-7 cells with IC50 values of 2.9 μM. SnPH exhibits higher cellular uptake than SnP in MCF-7 cells. A Rhodamine 123 (Rh123) assay showed that SnPH targets mitochondria and induces apoptosis by generating reactive oxygen species. The results demonstrate that this structural modification strategy merits further in-depth study.
- Full Text:
- Date Issued: 2022
AMADAR: a python-based package for large scale prediction of Diels–Alder transition state geometries and IRC path analysis
- Isamura, Bienfait K, Lobb, Kevin A
- Authors: Isamura, Bienfait K , Lobb, Kevin A
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/453143 , vital:75226 , xlink:href="https://link.springer.com/article/10.1186/s13321-022-00618-3"
- Description: Predicting transition state geometries is one of the most challenging tasks in computational chemistry, which often requires expert-based knowledge and permanent human intervention. This short communication reports technical details and preliminary results of a python-based tool (AMADAR) designed to generate any Diels–Alder (DA) transition state geometry (TS) and analyze determined IRC paths in a (quasi-)automated fashion, given the product SMILES. Two modules of the package are devoted to performing, from IRC paths, reaction force analyses (RFA) and atomic (fragment) decompositions of the reaction force F and reaction force constant κ. The performance of the protocol has been assessed using a dataset of 2000 DA cycloadducts retrieved from the ZINC database. The sequential location of the corresponding TSs was achieved with a success rate of 95%. RFA plots confrmed the reaction force constant κ to be a good indicator of the (non)synchronicity of the associated DA reactions. Moreover, the atomic decomposition of κ allows for the rationalization of the (a)synchronicity of each DA reaction in terms of contributions stemming from pairs of interacting atoms. The source code of the AMADAR tool is available on GitHub [CMCDD/AMADAR(github. com)] and can be used directly with minor customizations, mostly regarding the local working environment of the user.
- Full Text:
- Date Issued: 2022
- Authors: Isamura, Bienfait K , Lobb, Kevin A
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/453143 , vital:75226 , xlink:href="https://link.springer.com/article/10.1186/s13321-022-00618-3"
- Description: Predicting transition state geometries is one of the most challenging tasks in computational chemistry, which often requires expert-based knowledge and permanent human intervention. This short communication reports technical details and preliminary results of a python-based tool (AMADAR) designed to generate any Diels–Alder (DA) transition state geometry (TS) and analyze determined IRC paths in a (quasi-)automated fashion, given the product SMILES. Two modules of the package are devoted to performing, from IRC paths, reaction force analyses (RFA) and atomic (fragment) decompositions of the reaction force F and reaction force constant κ. The performance of the protocol has been assessed using a dataset of 2000 DA cycloadducts retrieved from the ZINC database. The sequential location of the corresponding TSs was achieved with a success rate of 95%. RFA plots confrmed the reaction force constant κ to be a good indicator of the (non)synchronicity of the associated DA reactions. Moreover, the atomic decomposition of κ allows for the rationalization of the (a)synchronicity of each DA reaction in terms of contributions stemming from pairs of interacting atoms. The source code of the AMADAR tool is available on GitHub [CMCDD/AMADAR(github. com)] and can be used directly with minor customizations, mostly regarding the local working environment of the user.
- Full Text:
- Date Issued: 2022
An assessment of the medium-term reproductive success of an extralimital white rhinoceros population
- Truter, Anja, Mgqatsa, Nokubonga, Parker, Daniel M
- Authors: Truter, Anja , Mgqatsa, Nokubonga , Parker, Daniel M
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/462570 , vital:76315 , xlink:href="https://doi.org/10.1080/15627020.2022.2132120"
- Description: The white rhinoceros (Ceratotherium simum) is threatened primarily due to continued poaching for its horns. In South Africa, partly to promote the conservation of the species, white rhinos have been introduced into areas where they did not occur historically (i.e. where they are considered extralimital). Few studies have investigated the conservation contribution of extralimital white rhinos to the overall national herd. We aimed to determine whether the white rhinos introduced to a private game reserve in the Eastern Cape province have been successful from a reproductive perspective. We calculated inter-calving intervals, age at first calving, sex ratios of calves, and recruitment rates for white rhinos at a single site between 1992 and 2019. The average net annual population growth rate for the population was 10%, which is higher than the recommended 5% by the Biodiversity Management Plan for white rhinos. Trends in density-dependent parameters such as age at first calving and inter-calving intervals also indicated that the study population is still well below the density at which ecological constraints may manifest. We demonstrate that an extralimital white rhino population in the Eastern Cape can be successful from a reproductive perspective.
- Full Text:
- Date Issued: 2022
An assessment of the medium-term reproductive success of an extralimital white rhinoceros population
- Authors: Truter, Anja , Mgqatsa, Nokubonga , Parker, Daniel M
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/462570 , vital:76315 , xlink:href="https://doi.org/10.1080/15627020.2022.2132120"
- Description: The white rhinoceros (Ceratotherium simum) is threatened primarily due to continued poaching for its horns. In South Africa, partly to promote the conservation of the species, white rhinos have been introduced into areas where they did not occur historically (i.e. where they are considered extralimital). Few studies have investigated the conservation contribution of extralimital white rhinos to the overall national herd. We aimed to determine whether the white rhinos introduced to a private game reserve in the Eastern Cape province have been successful from a reproductive perspective. We calculated inter-calving intervals, age at first calving, sex ratios of calves, and recruitment rates for white rhinos at a single site between 1992 and 2019. The average net annual population growth rate for the population was 10%, which is higher than the recommended 5% by the Biodiversity Management Plan for white rhinos. Trends in density-dependent parameters such as age at first calving and inter-calving intervals also indicated that the study population is still well below the density at which ecological constraints may manifest. We demonstrate that an extralimital white rhino population in the Eastern Cape can be successful from a reproductive perspective.
- Full Text:
- Date Issued: 2022
Comparative avifaunal richness and diversity in invasive Acacia dealbata patches and adjacent montane grasslands
- Seath, Jessica, Shackleton, Charlie M
- Authors: Seath, Jessica , Shackleton, Charlie M
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/406585 , vital:70287 , xlink:href="https://hdl.handle.net/10520/ejc-afzoo_v57_i1_a12"
- Description: Abstract Invasive alien species are regarded as the second greatest threat to biodiversity globally. Yet, at a local scale their effects may vary, underlying the requirement for more local-scale studies across taxa and settings. Here we consider the effects of an alien invasive tree (Acacia dealbata, 5–8 m tall) on avifaunal numbers, richness and diversity in A. dealbata patches of three sizes relative to adjacent montane grasslands. Analysis of historical aerial photographs showed that A. dealbata first occurred in the area in the late 1930s/early 1940s and has continued to spread, despite some efforts by the landowner to keep it in check. It now covers approximately 11% of the site. This has provided habitat for a number of bird species more characteristic of wooded vegetation types. The number, richness and diversity of birds were greater in A. dealbata patches than the adjacent grasslands of equivalent size. These measures increased with increasing patch size, but more rapidly for A. dealbata patches than grassland ones. Only six of the 48 species of birds recorded were common between the two vegetation types. The most common feeding guild in the A. dealbata patches was insectivores, whereas in the grasslands it was omnivores. Although the invasion of A. dealbata has added to the habitat diversity of the area, thereby facilitating increased avifaunal diversity, if it continues to spread, then the populations and perhaps richness of grassland birds are likely to be negatively affected.
- Full Text:
- Date Issued: 2022
- Authors: Seath, Jessica , Shackleton, Charlie M
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/406585 , vital:70287 , xlink:href="https://hdl.handle.net/10520/ejc-afzoo_v57_i1_a12"
- Description: Abstract Invasive alien species are regarded as the second greatest threat to biodiversity globally. Yet, at a local scale their effects may vary, underlying the requirement for more local-scale studies across taxa and settings. Here we consider the effects of an alien invasive tree (Acacia dealbata, 5–8 m tall) on avifaunal numbers, richness and diversity in A. dealbata patches of three sizes relative to adjacent montane grasslands. Analysis of historical aerial photographs showed that A. dealbata first occurred in the area in the late 1930s/early 1940s and has continued to spread, despite some efforts by the landowner to keep it in check. It now covers approximately 11% of the site. This has provided habitat for a number of bird species more characteristic of wooded vegetation types. The number, richness and diversity of birds were greater in A. dealbata patches than the adjacent grasslands of equivalent size. These measures increased with increasing patch size, but more rapidly for A. dealbata patches than grassland ones. Only six of the 48 species of birds recorded were common between the two vegetation types. The most common feeding guild in the A. dealbata patches was insectivores, whereas in the grasslands it was omnivores. Although the invasion of A. dealbata has added to the habitat diversity of the area, thereby facilitating increased avifaunal diversity, if it continues to spread, then the populations and perhaps richness of grassland birds are likely to be negatively affected.
- Full Text:
- Date Issued: 2022
Is green space associated with reduced crime? A national-scale study from the Global South
- Venter, Zander S, Shackleton, Charlie M, Faull, Andrew, Lancaster, Lizette, Breetzke, Gregory, Edelstein, Ian
- Authors: Venter, Zander S , Shackleton, Charlie M , Faull, Andrew , Lancaster, Lizette , Breetzke, Gregory , Edelstein, Ian
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/402340 , vital:69843 , xlink:href="https://doi.org/10.1016/j.scitotenv.2022.154005"
- Description: Assumptions about the link between green space and crime mitigation are informed by literature that overwhelmingly originates in the Global North. Little is known about the association between green spaces and crime in the Global South. We utilized 10 years of precinct-level crime statistics (n = 1152) over South Africa, a global crime hotspot, to test the hypothesis that green space is associated with reduced crime rates. We found that, after controlling for a number of socio-demographic confounders (unemployment, income, age, education, land use and population density), for every 1% increase in total green space there is a 1.2% (0.7 to 1.7%; 95% confidence interval) decrease in violent crime, and 1.3% (0.8 to 1.8%) decrease in property crime, with no effect on sexual crimes. However, the direction of the association changed for property crimes when exploring the effect of green space characteristics including tree cover and park accessibility. Property crimes increase by 0.4% (0.1 to 0.7%) with a percentage increase in tree cover, and by 0.9% (0.5 to 1.3%) with every kilometer increase in proximity to a public park. Further research, including experimental studies, is needed to better isolate causal mechanisms behind crime-green space associations, especially considering that green space may map to race and income inequality and that there may be more crime reporting in affluent areas. Nevertheless, our results provide a complementary contribution to the evidence from the Global North, highlighting the need for more nuanced definitions of green space and its characteristics when considering links to crime. When viewed in light of the broader suite of ecosystem services provided by green space, our results support urban greening as a major strategy towards achieving just and sustainable cities and towns.
- Full Text:
- Date Issued: 2022
- Authors: Venter, Zander S , Shackleton, Charlie M , Faull, Andrew , Lancaster, Lizette , Breetzke, Gregory , Edelstein, Ian
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/402340 , vital:69843 , xlink:href="https://doi.org/10.1016/j.scitotenv.2022.154005"
- Description: Assumptions about the link between green space and crime mitigation are informed by literature that overwhelmingly originates in the Global North. Little is known about the association between green spaces and crime in the Global South. We utilized 10 years of precinct-level crime statistics (n = 1152) over South Africa, a global crime hotspot, to test the hypothesis that green space is associated with reduced crime rates. We found that, after controlling for a number of socio-demographic confounders (unemployment, income, age, education, land use and population density), for every 1% increase in total green space there is a 1.2% (0.7 to 1.7%; 95% confidence interval) decrease in violent crime, and 1.3% (0.8 to 1.8%) decrease in property crime, with no effect on sexual crimes. However, the direction of the association changed for property crimes when exploring the effect of green space characteristics including tree cover and park accessibility. Property crimes increase by 0.4% (0.1 to 0.7%) with a percentage increase in tree cover, and by 0.9% (0.5 to 1.3%) with every kilometer increase in proximity to a public park. Further research, including experimental studies, is needed to better isolate causal mechanisms behind crime-green space associations, especially considering that green space may map to race and income inequality and that there may be more crime reporting in affluent areas. Nevertheless, our results provide a complementary contribution to the evidence from the Global North, highlighting the need for more nuanced definitions of green space and its characteristics when considering links to crime. When viewed in light of the broader suite of ecosystem services provided by green space, our results support urban greening as a major strategy towards achieving just and sustainable cities and towns.
- Full Text:
- Date Issued: 2022
Structural modification of RhIIItriarylcorroles for enhanced electrocatalyzed hydrogen evolution reactions
- Zhu, Weihua, Li, Lihua, Wang, Yu, Mack, John, Dingiswayo, Somila, Nyokong, Tebello, Liang, Xu
- Authors: Zhu, Weihua , Li, Lihua , Wang, Yu , Mack, John , Dingiswayo, Somila , Nyokong, Tebello , Liang, Xu
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/229933 , vital:49724 , xlink:href="https://doi.org/10.1016/j.dyepig.2021.110046"
- Description: A series of A3 type RhIIItriarylcorroles 2a-c with different meso-substituents with differing electron-donating and withdrawing properties and two A2B type RhIIItriarylcorroles 4a-b with meso-methylthiophenyls at the B position have been prepared and characterized. An analysis of structure-property relationships of 2a-c and 4a-b has been carried out by comparing the optical spectroscopy and electrochemistry of the dyes to trends predicted in DFT and TD-DFT calculations. Rational structural modification strategies that enhance the suitability of 2a-c for use as highly efficient catalysts for hydrogen evolution reactions on glassy carbon electrodes coated with 2a-c/reduced graphene oxide composites and of 4a-b in surface-modified Au electrodes are explored.
- Full Text:
- Date Issued: 2022
- Authors: Zhu, Weihua , Li, Lihua , Wang, Yu , Mack, John , Dingiswayo, Somila , Nyokong, Tebello , Liang, Xu
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/229933 , vital:49724 , xlink:href="https://doi.org/10.1016/j.dyepig.2021.110046"
- Description: A series of A3 type RhIIItriarylcorroles 2a-c with different meso-substituents with differing electron-donating and withdrawing properties and two A2B type RhIIItriarylcorroles 4a-b with meso-methylthiophenyls at the B position have been prepared and characterized. An analysis of structure-property relationships of 2a-c and 4a-b has been carried out by comparing the optical spectroscopy and electrochemistry of the dyes to trends predicted in DFT and TD-DFT calculations. Rational structural modification strategies that enhance the suitability of 2a-c for use as highly efficient catalysts for hydrogen evolution reactions on glassy carbon electrodes coated with 2a-c/reduced graphene oxide composites and of 4a-b in surface-modified Au electrodes are explored.
- Full Text:
- Date Issued: 2022
Synthesis and conformational studies of 5-bromo-1-[(N-substituted-carbamoyl) methyl]-7-azabenzimidazoles
- Oluwafemi, Kola A, Klein, Rosalyn, Lobb, Kevin A, Tshiwawa, Tendamudzimu, Isaacs, Michelle, Hoppe, Heinrich C, Kaye, Perry T
- Authors: Oluwafemi, Kola A , Klein, Rosalyn , Lobb, Kevin A , Tshiwawa, Tendamudzimu , Isaacs, Michelle , Hoppe, Heinrich C , Kaye, Perry T
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/452800 , vital:75171 , xlink:href="https://doi.org/10.1016/j.molstruc.2022.133811"
- Description: The Cs2CO3-catalysed condensation of 5-bromo-7-azabenzimidazole with a series of bromomethyl ketones has afforded a small library of ten, novel 5-bromo-1-[(N-substututed-carbamoyl)methyl]-7-azabenzimidazoles. Rotamerism in the products, as evidenced by the splitting of 1H- and 13C-NMR signals, is attributed to hindered internal rotation about the amide N-C(=O) bond, and has been explored using dynamic NMR (DNMR) analysis and computational methods at the GIAO B3LYP/6-311+G(2d,p) level of theory. Coalescence temperatures have been obtained for representative examples and rotational barriers determined experimentally and theoretically. A detailed theoretical analysis has been undertaken to explore conformations which may contribute to the relative populations of the s-cis and s-trans rotamers. The products have also been screened for cytotoxicity and activity against two parasitic protozoan strains (Plasmodium falciparum and Trypanosoma brucei).
- Full Text:
- Date Issued: 2022
- Authors: Oluwafemi, Kola A , Klein, Rosalyn , Lobb, Kevin A , Tshiwawa, Tendamudzimu , Isaacs, Michelle , Hoppe, Heinrich C , Kaye, Perry T
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/452800 , vital:75171 , xlink:href="https://doi.org/10.1016/j.molstruc.2022.133811"
- Description: The Cs2CO3-catalysed condensation of 5-bromo-7-azabenzimidazole with a series of bromomethyl ketones has afforded a small library of ten, novel 5-bromo-1-[(N-substututed-carbamoyl)methyl]-7-azabenzimidazoles. Rotamerism in the products, as evidenced by the splitting of 1H- and 13C-NMR signals, is attributed to hindered internal rotation about the amide N-C(=O) bond, and has been explored using dynamic NMR (DNMR) analysis and computational methods at the GIAO B3LYP/6-311+G(2d,p) level of theory. Coalescence temperatures have been obtained for representative examples and rotational barriers determined experimentally and theoretically. A detailed theoretical analysis has been undertaken to explore conformations which may contribute to the relative populations of the s-cis and s-trans rotamers. The products have also been screened for cytotoxicity and activity against two parasitic protozoan strains (Plasmodium falciparum and Trypanosoma brucei).
- Full Text:
- Date Issued: 2022
Synthesis, stereochemistry and in vitro STD NMR and in silico HIV-1 PR enzyme-binding potential of MBH-derived inhibitors
- Tukulula, Matshawandile, Olasupo, Idris A, Mugumbate, Grace C, Lobb, Kevin A, Klein, Rosalyn, Sayed, Yasien, Tshiwawa, Tendamudzimu, Kaye, Perry T
- Authors: Tukulula, Matshawandile , Olasupo, Idris A , Mugumbate, Grace C , Lobb, Kevin A , Klein, Rosalyn , Sayed, Yasien , Tshiwawa, Tendamudzimu , Kaye, Perry T
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/452813 , vital:75172 , xlink:href="https://doi.org/10.1016/j.molstruc.2022.133716"
- Description: Aza-Michael reactions of a pyridine-3-carbaldehyde-derived Morita-Baylis-Hillman (MBH) adduct with various amines have afforded a series of 10 diastereomeric products, stereochemical analysis of which has been achieved using a combination of NMR (1D, 2D and NOESY) and computer modelling methods. Saturation Transfer Difference (STD) 1H NMR spectroscopy and in silico molecular docking studies have been used to explore the HIV-1 protease sub-type C enzyme binding potential of these compounds in five different HIV-1 PR enzyme receptors.
- Full Text:
- Date Issued: 2022
- Authors: Tukulula, Matshawandile , Olasupo, Idris A , Mugumbate, Grace C , Lobb, Kevin A , Klein, Rosalyn , Sayed, Yasien , Tshiwawa, Tendamudzimu , Kaye, Perry T
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/452813 , vital:75172 , xlink:href="https://doi.org/10.1016/j.molstruc.2022.133716"
- Description: Aza-Michael reactions of a pyridine-3-carbaldehyde-derived Morita-Baylis-Hillman (MBH) adduct with various amines have afforded a series of 10 diastereomeric products, stereochemical analysis of which has been achieved using a combination of NMR (1D, 2D and NOESY) and computer modelling methods. Saturation Transfer Difference (STD) 1H NMR spectroscopy and in silico molecular docking studies have been used to explore the HIV-1 protease sub-type C enzyme binding potential of these compounds in five different HIV-1 PR enzyme receptors.
- Full Text:
- Date Issued: 2022
The implications of ortho-, meta-and para-directors on the in-vitro photodynamic antimicrobial chemotherapy activity of cationic pyridyl-dihydrothiazole phthalocyanines
- Magadla, Aviwe, Openda, Yolande Ikala, Nyokong, Tebello
- Authors: Magadla, Aviwe , Openda, Yolande Ikala , Nyokong, Tebello
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/295875 , vital:57386 , xlink:href="https://doi.org/10.1016/j.pdpdt.2022.103029"
- Description: Cationic Zn phthalocyanine complexes were derived by alkylation reaction of tetra-(pyridinyloxy) phthalocyanines (Pcs) at the ortho, meta, and para positions to form Zn (II) tetrakis 3-(4-(2-pyridin-1-ium-1-yl) butyl)-2-mercapto-4,5-dihydrothiazol-3-ium phthalocyanine (2), Zn (II) tetrakis 3-(4-(3-pyridin-1-ium-1-yl) butyl)-2-mercapto-4,5-dihydrothiazol-3-ium phthalocyanine (4) and Zn (II) tetrakis 3-(4-(4-pyridin-1-ium-1-yl) butyl)-2-mercapto-4,5-dihydrothiazol-3-ium phthalocyanine (6). The photophysicochemical behaviors of the Pc complexes were assessed. The meta and para-substituted complexes gave high singlet oxygen quantum yields. The cationic Pcs demonstrated good planktonic antibacterial activity against Staphylococcus aureus and Escherichia coli with the high log reduction values of 9.29 and 8.55, respectively. The cationic complexes also showed a significant decrease in the viability of in vitro biofilms after photo-antimicrobial chemotherapy at 100 µM for both Staphylococcus aureus and Escherichia coli biofilms.
- Full Text:
- Date Issued: 2022
- Authors: Magadla, Aviwe , Openda, Yolande Ikala , Nyokong, Tebello
- Date: 2022
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/295875 , vital:57386 , xlink:href="https://doi.org/10.1016/j.pdpdt.2022.103029"
- Description: Cationic Zn phthalocyanine complexes were derived by alkylation reaction of tetra-(pyridinyloxy) phthalocyanines (Pcs) at the ortho, meta, and para positions to form Zn (II) tetrakis 3-(4-(2-pyridin-1-ium-1-yl) butyl)-2-mercapto-4,5-dihydrothiazol-3-ium phthalocyanine (2), Zn (II) tetrakis 3-(4-(3-pyridin-1-ium-1-yl) butyl)-2-mercapto-4,5-dihydrothiazol-3-ium phthalocyanine (4) and Zn (II) tetrakis 3-(4-(4-pyridin-1-ium-1-yl) butyl)-2-mercapto-4,5-dihydrothiazol-3-ium phthalocyanine (6). The photophysicochemical behaviors of the Pc complexes were assessed. The meta and para-substituted complexes gave high singlet oxygen quantum yields. The cationic Pcs demonstrated good planktonic antibacterial activity against Staphylococcus aureus and Escherichia coli with the high log reduction values of 9.29 and 8.55, respectively. The cationic complexes also showed a significant decrease in the viability of in vitro biofilms after photo-antimicrobial chemotherapy at 100 µM for both Staphylococcus aureus and Escherichia coli biofilms.
- Full Text:
- Date Issued: 2022
An introduction to the fourth decadal review of biological control of invasive alien plants in South Africa (2011–2020)
- Paterson, Iain D, den Breeyen, Alana, Martin, Grant D, Olckers, Tamryn
- Authors: Paterson, Iain D , den Breeyen, Alana , Martin, Grant D , Olckers, Tamryn
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/413387 , vital:71031 , xlink:href="https://hdl.handle.net/10520/ejc-ento_v29_n3_a2"
- Description: This special issue is the fourth decadal review of biological control of invasive alien plants (biocontrol of weeds) in South Africa, following those published in 1991, 1999 and 2011. Including this introduction, there are 24 papers covering the weed biocontrol programmes, or important developments in the science and practice, from the period 2011-2020. Seventy-two target weed species are covered, including 25 species on which projects were initiated during the past decade. Developments in regulations, mass-rearing and implementation, and community engagement are also reviewed. An updated catalogue of agents released, rejected and under consideration is presented and reflects the most recent methods of quantifying success in weed biocontrol. Key events over the last decade include the hosting of the XIV International Symposium on Biological Control of Weeds to celebrate 100 years of weed biocontrol in South Africa, as well as the establishment of the Centre for Biological Control at Rhodes University. The science and practice of weed biocontrol has expanded significantly in the past decade, with growth in the number of researchers and practitioners, increased funding, and an increased number of scholarly outputs. Unlike many other countries in the world, South Africa has largely avoided constraints due to restrictive and risk averse legislation and bureaucracy, and has continued to release new biocontrol agents at a similar rate to that in previous years. Much of the success of weed biocontrol in South Africa is due to the sustained and increasing support of the Natural Resource Management Programme of the Department of Forestry, Fisheries and the Environment (Working for Water Programme). However, gaps in funding, where no funds are available for months at a time, are a major concern as the weed biocontrol community loses human capital in these periods, and research programmes suffer significant set-backs. Weed biocontrol is an essential component of South Africa’s strategy to reduce the negative impacts of invasive alien plants and has contributed significantly towards the protection of the country’s ecosystems, indigenous biodiversity, water security, agricultural productivity, and society in general. If the trend of increasing support for weed biocontrol in South Africa continues, we can expect that the benefits for the country at large will increase substantially in the future.
- Full Text:
- Date Issued: 2021
- Authors: Paterson, Iain D , den Breeyen, Alana , Martin, Grant D , Olckers, Tamryn
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/413387 , vital:71031 , xlink:href="https://hdl.handle.net/10520/ejc-ento_v29_n3_a2"
- Description: This special issue is the fourth decadal review of biological control of invasive alien plants (biocontrol of weeds) in South Africa, following those published in 1991, 1999 and 2011. Including this introduction, there are 24 papers covering the weed biocontrol programmes, or important developments in the science and practice, from the period 2011-2020. Seventy-two target weed species are covered, including 25 species on which projects were initiated during the past decade. Developments in regulations, mass-rearing and implementation, and community engagement are also reviewed. An updated catalogue of agents released, rejected and under consideration is presented and reflects the most recent methods of quantifying success in weed biocontrol. Key events over the last decade include the hosting of the XIV International Symposium on Biological Control of Weeds to celebrate 100 years of weed biocontrol in South Africa, as well as the establishment of the Centre for Biological Control at Rhodes University. The science and practice of weed biocontrol has expanded significantly in the past decade, with growth in the number of researchers and practitioners, increased funding, and an increased number of scholarly outputs. Unlike many other countries in the world, South Africa has largely avoided constraints due to restrictive and risk averse legislation and bureaucracy, and has continued to release new biocontrol agents at a similar rate to that in previous years. Much of the success of weed biocontrol in South Africa is due to the sustained and increasing support of the Natural Resource Management Programme of the Department of Forestry, Fisheries and the Environment (Working for Water Programme). However, gaps in funding, where no funds are available for months at a time, are a major concern as the weed biocontrol community loses human capital in these periods, and research programmes suffer significant set-backs. Weed biocontrol is an essential component of South Africa’s strategy to reduce the negative impacts of invasive alien plants and has contributed significantly towards the protection of the country’s ecosystems, indigenous biodiversity, water security, agricultural productivity, and society in general. If the trend of increasing support for weed biocontrol in South Africa continues, we can expect that the benefits for the country at large will increase substantially in the future.
- Full Text:
- Date Issued: 2021
Ecosystem of renewable energy enterprises for sustainable development: A systematic review
- Diale, Dineo, Kanakana-Katumba, Mukondeleli G, Maladzhi, Rendani W
- Authors: Diale, Dineo , Kanakana-Katumba, Mukondeleli G , Maladzhi, Rendani W
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/450613 , vital:74967 , xlink:href="https://www.astesj.com/publications/ASTESJ_060146.pdf"
- Description: In the Global sphere, the social, environmental, and economic pillars are the main contributors and accelerators to the sustainable development goals. As a result, the latter creates a platform for interdisciplinary researchers, society and decision-makers to collaborate in formulating ways to minimize factors contributing to environmental concerns. Energy is currently referred to as one of the scarce resources. The scarcity of electricity is mainly experienced in the rural areas of most countries in the world. The mandate of the green economy is to introduce innovative ways to redress the inequalities and lack of access, especially when it comes to Energy. Based on the sector's efforts, questions arise as to what comprises the ecosystem that can be accelerated to enhance entry to the sector. Hence, the researchers focus on Renewable Energy with specific reference to the entrepreneurial motives to meet sustainable goals. The applicable sustainable goals are goal 7 (affordable and clean Energy) and Goal 8 (decent work and economic growth). Furthermore, Energy contributes to modern access and poverty reduction to accelerate the transitioning to a Green economy. The current paper hopes to answer the following questions: Firstly, how Renewable Energy enterprise can contribute to sustainable development goals theoretically. Secondly, how can the theoretical energy enterprise ecosystem be contextualized in the South African context? A theoretical review was conducted through a literature review of which n=47 sources met the criteria that the researchers set for ecosystem variables. The overarching goal of the paper is premised on various works of literature building the ecosystem of the elements highlighted by most researchers in the field of renewable energy enterprises or business ventures. From the various models, the framework emerged singling out the critical success factors of the ecosystem of the Renewable Energy enterprise. The theoretical ecosystem consists of accelerators, social factors, sustainable development goals, as well as selected business models. The latter ecosystem was then contextualized in the South African context for a complete framework. Some of the critical drivers derived from the latter broad ecosystem are: Renewable Energy Feed-in Tarrif (REFIT), Utility Renewable Energy business model, Customer renewable energy business model, Energy Justice (distributive justice), Off-grid (Mini-grid), Saurian Lilting lamp, Renewable powered irrigation system.
- Full Text:
- Date Issued: 2021
- Authors: Diale, Dineo , Kanakana-Katumba, Mukondeleli G , Maladzhi, Rendani W
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/450613 , vital:74967 , xlink:href="https://www.astesj.com/publications/ASTESJ_060146.pdf"
- Description: In the Global sphere, the social, environmental, and economic pillars are the main contributors and accelerators to the sustainable development goals. As a result, the latter creates a platform for interdisciplinary researchers, society and decision-makers to collaborate in formulating ways to minimize factors contributing to environmental concerns. Energy is currently referred to as one of the scarce resources. The scarcity of electricity is mainly experienced in the rural areas of most countries in the world. The mandate of the green economy is to introduce innovative ways to redress the inequalities and lack of access, especially when it comes to Energy. Based on the sector's efforts, questions arise as to what comprises the ecosystem that can be accelerated to enhance entry to the sector. Hence, the researchers focus on Renewable Energy with specific reference to the entrepreneurial motives to meet sustainable goals. The applicable sustainable goals are goal 7 (affordable and clean Energy) and Goal 8 (decent work and economic growth). Furthermore, Energy contributes to modern access and poverty reduction to accelerate the transitioning to a Green economy. The current paper hopes to answer the following questions: Firstly, how Renewable Energy enterprise can contribute to sustainable development goals theoretically. Secondly, how can the theoretical energy enterprise ecosystem be contextualized in the South African context? A theoretical review was conducted through a literature review of which n=47 sources met the criteria that the researchers set for ecosystem variables. The overarching goal of the paper is premised on various works of literature building the ecosystem of the elements highlighted by most researchers in the field of renewable energy enterprises or business ventures. From the various models, the framework emerged singling out the critical success factors of the ecosystem of the Renewable Energy enterprise. The theoretical ecosystem consists of accelerators, social factors, sustainable development goals, as well as selected business models. The latter ecosystem was then contextualized in the South African context for a complete framework. Some of the critical drivers derived from the latter broad ecosystem are: Renewable Energy Feed-in Tarrif (REFIT), Utility Renewable Energy business model, Customer renewable energy business model, Energy Justice (distributive justice), Off-grid (Mini-grid), Saurian Lilting lamp, Renewable powered irrigation system.
- Full Text:
- Date Issued: 2021
Environmental entrepreneurship as an innovation catalyst for social change: A systematic review as a basis for future research
- Diale, Dineo, Kanakana-Katumba, Mukondeleli G, Maladzhi, Rendani W
- Authors: Diale, Dineo , Kanakana-Katumba, Mukondeleli G , Maladzhi, Rendani W
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/450641 , vital:74970 , xlink:href="https://www.astesj.com/publications/ASTESJ_060145.pdf"
- Description: There are pressures to adopt sustainable behaviour more so in generating profits and benefiting the society to accelerate green efforts through a green framework. The overarching goal of the paper is premised through various works of literature, building the ecosystem the elements highlighted by most researchers in the field of environmental entrepreneurship. The various models reviewed consists of generic incubators and entrepreneurship, and societal and environmental factors. Environmental entrepreneurship is often used interchangeably with concepts such as green entrepreneurship and ecopreneurship which under-researched globally, with non-existent efforts on the applicability and modelling of key environmental entrepreneurship within a specific context utilising the system dynamics approach. In order to assess the environmental entrepreneurship ecosystem, the authors adopted a system dynamic approach to determine key variables that enable the development of the system. A literature review was conducted, and of the 135 articles reviewed, n= 92 peer-reviewed articles met the criteria that the researchers set. Some of the results emanating from a systematic review are environmental policy, green skills, financial and non-financial support, societal and behavioural factors, environmental agility, ethics and governance, and access to markets. The theoretical results are simulated using system dynamics modelling. Due to limited research on the abovementioned topic, a possible impacting variable (Exogenous variables) was broadened to add value to, and have an impact on, the study. Upon reviewing the above-mentioned models, the framework emerged signalling elements to be simulated in the system dynamics model, which were then theoretically contextualised for the South African context. The theoretical virtual system dynamic model forming part of the framework will be tested and validated in the next study. The applicability of the theoretical ecosystem to South African context as well as future recommendations are provided in the study.
- Full Text:
- Date Issued: 2021
- Authors: Diale, Dineo , Kanakana-Katumba, Mukondeleli G , Maladzhi, Rendani W
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/450641 , vital:74970 , xlink:href="https://www.astesj.com/publications/ASTESJ_060145.pdf"
- Description: There are pressures to adopt sustainable behaviour more so in generating profits and benefiting the society to accelerate green efforts through a green framework. The overarching goal of the paper is premised through various works of literature, building the ecosystem the elements highlighted by most researchers in the field of environmental entrepreneurship. The various models reviewed consists of generic incubators and entrepreneurship, and societal and environmental factors. Environmental entrepreneurship is often used interchangeably with concepts such as green entrepreneurship and ecopreneurship which under-researched globally, with non-existent efforts on the applicability and modelling of key environmental entrepreneurship within a specific context utilising the system dynamics approach. In order to assess the environmental entrepreneurship ecosystem, the authors adopted a system dynamic approach to determine key variables that enable the development of the system. A literature review was conducted, and of the 135 articles reviewed, n= 92 peer-reviewed articles met the criteria that the researchers set. Some of the results emanating from a systematic review are environmental policy, green skills, financial and non-financial support, societal and behavioural factors, environmental agility, ethics and governance, and access to markets. The theoretical results are simulated using system dynamics modelling. Due to limited research on the abovementioned topic, a possible impacting variable (Exogenous variables) was broadened to add value to, and have an impact on, the study. Upon reviewing the above-mentioned models, the framework emerged signalling elements to be simulated in the system dynamics model, which were then theoretically contextualised for the South African context. The theoretical virtual system dynamic model forming part of the framework will be tested and validated in the next study. The applicability of the theoretical ecosystem to South African context as well as future recommendations are provided in the study.
- Full Text:
- Date Issued: 2021
Grand challenges in urban agriculture: ecological and social approaches to transformative sustainability
- Zimmerer, Karl S, Bell, Martha G, Chirisa, Innocent, Duvall, Chris S, Egerer, Monika, Hung, Po-Yi, Lerner, Amy M, Shackleton, Charlie M, Ward, James D, Ochoa, Carolina Y
- Authors: Zimmerer, Karl S , Bell, Martha G , Chirisa, Innocent , Duvall, Chris S , Egerer, Monika , Hung, Po-Yi , Lerner, Amy M , Shackleton, Charlie M , Ward, James D , Ochoa, Carolina Y
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/402287 , vital:69838 , xlink:href="https://doi.org/10.3389/fsufs.2021.668561"
- Description: This synopsis of the Grand Challenges of Urban Agriculture (UA) is framed by the urgent need to understand and strengthen the expanding yet highly diverse roles of UA amid rapid global urbanization, failures of predominant food systems, and crises in systems of physical and mental health. More than half of humanity lives in cities today and by 2030 this is projected to grow to 60.4 percent, ∼5 billion people (UN Habitat, 2020). More than 90 percent of urban demographic increase is anticipated to take place in the developing world. Ecological and social dimensions of UA are situated in these expanding spaces of cities, towns, and villages (along with their urban fringe or peri-urban areas), and among their diverse populations. UA is further situated in the powerful, far-reaching influences of urbanization processes that occur within and beyond these spaces. UA is thus integral to the prospect of Urban Sustainability as SDG 11 (“Make cities and human settlements inclusive, safe, resilient and sustainable”) of the U.N.’s 2030 Agenda for Sustainable Development.
- Full Text:
- Date Issued: 2021
- Authors: Zimmerer, Karl S , Bell, Martha G , Chirisa, Innocent , Duvall, Chris S , Egerer, Monika , Hung, Po-Yi , Lerner, Amy M , Shackleton, Charlie M , Ward, James D , Ochoa, Carolina Y
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/402287 , vital:69838 , xlink:href="https://doi.org/10.3389/fsufs.2021.668561"
- Description: This synopsis of the Grand Challenges of Urban Agriculture (UA) is framed by the urgent need to understand and strengthen the expanding yet highly diverse roles of UA amid rapid global urbanization, failures of predominant food systems, and crises in systems of physical and mental health. More than half of humanity lives in cities today and by 2030 this is projected to grow to 60.4 percent, ∼5 billion people (UN Habitat, 2020). More than 90 percent of urban demographic increase is anticipated to take place in the developing world. Ecological and social dimensions of UA are situated in these expanding spaces of cities, towns, and villages (along with their urban fringe or peri-urban areas), and among their diverse populations. UA is further situated in the powerful, far-reaching influences of urbanization processes that occur within and beyond these spaces. UA is thus integral to the prospect of Urban Sustainability as SDG 11 (“Make cities and human settlements inclusive, safe, resilient and sustainable”) of the U.N.’s 2030 Agenda for Sustainable Development.
- Full Text:
- Date Issued: 2021
Handwriting Recognition using Deep Learning with Effective Data Augmentation Techniques
- Brown, Dane L, Lidzhade, Ipfi
- Authors: Brown, Dane L , Lidzhade, Ipfi
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/465700 , vital:76633 , xlink:href="https://ieeexplore.ieee.org/abstract/document/9519359"
- Description: Machine learning techniques have been successfully used in deciphering handwritten text. Deep learning has made further improvements in this regard. However, they require substantial amounts of training data. This research aims to improve the effectiveness of classification accuracy in the presence of limited training data on handwriting recognition. The main focus thus involves enabling deep models to converge during training on smaller datasets using data augmentation. This will allow for broader use of these systems across more regions, greater accessibility, and future related systems to be less reliant on the amount of data available. Therefore, the proposed research includes an image processing and machine learning approach to handwriting recognition while generating more sample data in various ways. Applying random cropping as an augmentation technique resulted in higher accuracy than several other augmentation techniques examined in this paper. Some of these techniques performed worse than on unaugmented data.
- Full Text:
- Date Issued: 2021
- Authors: Brown, Dane L , Lidzhade, Ipfi
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/465700 , vital:76633 , xlink:href="https://ieeexplore.ieee.org/abstract/document/9519359"
- Description: Machine learning techniques have been successfully used in deciphering handwritten text. Deep learning has made further improvements in this regard. However, they require substantial amounts of training data. This research aims to improve the effectiveness of classification accuracy in the presence of limited training data on handwriting recognition. The main focus thus involves enabling deep models to converge during training on smaller datasets using data augmentation. This will allow for broader use of these systems across more regions, greater accessibility, and future related systems to be less reliant on the amount of data available. Therefore, the proposed research includes an image processing and machine learning approach to handwriting recognition while generating more sample data in various ways. Applying random cropping as an augmentation technique resulted in higher accuracy than several other augmentation techniques examined in this paper. Some of these techniques performed worse than on unaugmented data.
- Full Text:
- Date Issued: 2021
How people foraging in urban greenspace can mobilize social–ecological resilience during Covid-19 and beyond
- Sardeshpande, Mallika, Hurley, Patrick T, Mollee, Eefke, Garekae, Hesekia, Dahlberg, Annika C, Emery, Marla R, Shackleton, Charlie M
- Authors: Sardeshpande, Mallika , Hurley, Patrick T , Mollee, Eefke , Garekae, Hesekia , Dahlberg, Annika C , Emery, Marla R , Shackleton, Charlie M
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/402313 , vital:69841 , xlink:href="https://doi.org/10.3389/frsc.2021.686254"
- Description: Informal foraging for food and other natural materials in urban greenspaces is an activity undertaken by many across the world. For some, foraging is a necessary means of survival and livelihood, while for others, it provides cultural and recreational opportunities. In the socioeconomic crises induced by Covid-19, foraging can help communities, especially (but not exclusively) vulnerable people, cope with the impacts of lockdowns, and associated economic decline. In the long run, foraging can help improve social–ecological resilience in urban systems, particularly in response to climate, economic, and disease disruptions. First, we elaborate the ways in which urban foraging can provide immediate relief from the shocks to natural, human, social, physical, and financial capital. We then describe how over time, the livelihood, food, and income diversification brought about by foraging can contribute to preparedness for future uncertainties and gradual change. Cities are increasingly becoming home to the majority of humanity, and urban foraging can be one of the pathways that makes cities more liveable, for humans as well as other species we coexist with. Through the capitals framework, we explore the role foraging could play in addressing issues of biodiversity conservation, culture, and education, good governance and social justice, multifunctional greenspace, and sustainable nature-based livelihoods in urban areas.
- Full Text:
- Date Issued: 2021
- Authors: Sardeshpande, Mallika , Hurley, Patrick T , Mollee, Eefke , Garekae, Hesekia , Dahlberg, Annika C , Emery, Marla R , Shackleton, Charlie M
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/402313 , vital:69841 , xlink:href="https://doi.org/10.3389/frsc.2021.686254"
- Description: Informal foraging for food and other natural materials in urban greenspaces is an activity undertaken by many across the world. For some, foraging is a necessary means of survival and livelihood, while for others, it provides cultural and recreational opportunities. In the socioeconomic crises induced by Covid-19, foraging can help communities, especially (but not exclusively) vulnerable people, cope with the impacts of lockdowns, and associated economic decline. In the long run, foraging can help improve social–ecological resilience in urban systems, particularly in response to climate, economic, and disease disruptions. First, we elaborate the ways in which urban foraging can provide immediate relief from the shocks to natural, human, social, physical, and financial capital. We then describe how over time, the livelihood, food, and income diversification brought about by foraging can contribute to preparedness for future uncertainties and gradual change. Cities are increasingly becoming home to the majority of humanity, and urban foraging can be one of the pathways that makes cities more liveable, for humans as well as other species we coexist with. Through the capitals framework, we explore the role foraging could play in addressing issues of biodiversity conservation, culture, and education, good governance and social justice, multifunctional greenspace, and sustainable nature-based livelihoods in urban areas.
- Full Text:
- Date Issued: 2021
Positively charged styryl pyridine substituted Zn (II) Phthalocyanines for Photodynamic Therapy and Photoantimicrobial Chemotherapy
- Magadla, Aviwe, Babu, Balaji, Mack, John, Nyokong, Tebello
- Authors: Magadla, Aviwe , Babu, Balaji , Mack, John , Nyokong, Tebello
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/190600 , vital:45009 , xlink:href="https://doi.org/10.1039/D1DT01047F"
- Description: Cationic Zn phthalocyanine complexes were synthesized using Knoevenagel reaction starting from a Zn(II) tetrakis(2-formylphenoxy)phthalocyanine (1) to form Zn(II) tetrakis(1-butyl-4-(4-(tetraphenoxy)styryl)pyridin-1-ium) phthalocyanine (2) and Zn(II) tetrakis(4-(4-(tetraphenoxy)styryl)-1-(4-(triphenylphosphonio)butyl)pyridin-1-ium)phthalocyanine (3). The photophysicochemical behaviours of the Pc complexes were assessed. The cationic complexes display high water-solubility and gave moderate singlet oxygen quantum yield in water. The cationic Pcs demonstrate good cellular uptake and photodynamic activity against MCF-7 cells with IC50 values of 8.2 and 4.9 μM for 2 and 3, respectively. The cationic Pcs also demonstrate high photoantimicrobial activity against Escherichia coli with log reductions of 5.3 and 6.0 for 2 and 3, respectively.
- Full Text:
- Date Issued: 2021
- Authors: Magadla, Aviwe , Babu, Balaji , Mack, John , Nyokong, Tebello
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/190600 , vital:45009 , xlink:href="https://doi.org/10.1039/D1DT01047F"
- Description: Cationic Zn phthalocyanine complexes were synthesized using Knoevenagel reaction starting from a Zn(II) tetrakis(2-formylphenoxy)phthalocyanine (1) to form Zn(II) tetrakis(1-butyl-4-(4-(tetraphenoxy)styryl)pyridin-1-ium) phthalocyanine (2) and Zn(II) tetrakis(4-(4-(tetraphenoxy)styryl)-1-(4-(triphenylphosphonio)butyl)pyridin-1-ium)phthalocyanine (3). The photophysicochemical behaviours of the Pc complexes were assessed. The cationic complexes display high water-solubility and gave moderate singlet oxygen quantum yield in water. The cationic Pcs demonstrate good cellular uptake and photodynamic activity against MCF-7 cells with IC50 values of 8.2 and 4.9 μM for 2 and 3, respectively. The cationic Pcs also demonstrate high photoantimicrobial activity against Escherichia coli with log reductions of 5.3 and 6.0 for 2 and 3, respectively.
- Full Text:
- Date Issued: 2021
The experiences and perceptions of mental health service provision at a primary health centre in the Eastern Cape
- Booysen, Duane D, Mahe-Poyo, Phumeza, Grant, Rosemary
- Authors: Booysen, Duane D , Mahe-Poyo, Phumeza , Grant, Rosemary
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/454143 , vital:75313 , xlink:href="https://journals.co.za/doi/full/10.4102/sajpsychiatry.v27i0.1641"
- Description: Background Since 1994, the South African healthcare system has un-dergone several changes to meet the needs of contemporary South Africa. Yet the state of mental healthcare, especially in low-resource areas, remains in a precarious state. Aim This study aimed to explore how persons diagnosed with a mental disorder experience and per-ceive mental health services in a low-resource community in the East-ern Cape, South Africa. Setting The study was conducted at a primary care clinic in a low resource community setting in the Eastern Cape, South Africa.
- Full Text:
- Date Issued: 2021
- Authors: Booysen, Duane D , Mahe-Poyo, Phumeza , Grant, Rosemary
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/454143 , vital:75313 , xlink:href="https://journals.co.za/doi/full/10.4102/sajpsychiatry.v27i0.1641"
- Description: Background Since 1994, the South African healthcare system has un-dergone several changes to meet the needs of contemporary South Africa. Yet the state of mental healthcare, especially in low-resource areas, remains in a precarious state. Aim This study aimed to explore how persons diagnosed with a mental disorder experience and per-ceive mental health services in a low-resource community in the East-ern Cape, South Africa. Setting The study was conducted at a primary care clinic in a low resource community setting in the Eastern Cape, South Africa.
- Full Text:
- Date Issued: 2021
Thien-2-yl substituted chlorins as photosensitizers for photodynamic therapy and photodynamic antimicrobial chemotherapy
- Babu, Balaji, Sindelo, Azole, Mack, John, Nyokong, Tebello
- Authors: Babu, Balaji , Sindelo, Azole , Mack, John , Nyokong, Tebello
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/190578 , vital:45007 , xlink:href="https://doi.org/10.1016/j.dyepig.2020.108886"
- Description: The synthesis and characterization of meso-tetra(thien-2-yl)chlorin (1) and meso-tetra(5-bromothien-2-yl)chlorin (2) is reported. These dyes have red-shifted absorption maxima compared to those of the analogous meso-tetraphenylchlorin (3). 1 and 2 have Q bands at 660 and 664 nm, respectively, singlet oxygen quantum yields of 0.60 and 0.64 and exhibit good photostability. The triplet states were found to have lifetimes of 8.6 μs in N2 purged DMF. Time-dependent cellular uptake of chlorins reached a maximum in MCF-7 cancer cells after 12 h. Upon irradiation with a Thorlabs M660L3 LED (280 mW cm−2), 2 exhibited better photocytotoxicity with an IC50 value of 2.7 μM against MCF-7 cells. The 2ʹ,7ʹ-dichlorodihydrofluorescein diacetate (DCFDA) assay provided evidence for intracellular generation of reactive oxygen species. Photodynamic inactivation of bacteria by the chlorins was also studied. 2 exhibits better activity with log reduction values of 7.42 and 8.34 towards Staphylococcus aureus and Escherichia coli, respectively, under illumination for 60 min at 660 nm with a Thorlabs M660L3 LED (280 mW cm−2). These results demonstrate that 2 is a promising candidate for future in vivo experiments and merits further in-depth investigation.
- Full Text:
- Date Issued: 2021
- Authors: Babu, Balaji , Sindelo, Azole , Mack, John , Nyokong, Tebello
- Date: 2021
- Subjects: To be catalogued
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/190578 , vital:45007 , xlink:href="https://doi.org/10.1016/j.dyepig.2020.108886"
- Description: The synthesis and characterization of meso-tetra(thien-2-yl)chlorin (1) and meso-tetra(5-bromothien-2-yl)chlorin (2) is reported. These dyes have red-shifted absorption maxima compared to those of the analogous meso-tetraphenylchlorin (3). 1 and 2 have Q bands at 660 and 664 nm, respectively, singlet oxygen quantum yields of 0.60 and 0.64 and exhibit good photostability. The triplet states were found to have lifetimes of 8.6 μs in N2 purged DMF. Time-dependent cellular uptake of chlorins reached a maximum in MCF-7 cancer cells after 12 h. Upon irradiation with a Thorlabs M660L3 LED (280 mW cm−2), 2 exhibited better photocytotoxicity with an IC50 value of 2.7 μM against MCF-7 cells. The 2ʹ,7ʹ-dichlorodihydrofluorescein diacetate (DCFDA) assay provided evidence for intracellular generation of reactive oxygen species. Photodynamic inactivation of bacteria by the chlorins was also studied. 2 exhibits better activity with log reduction values of 7.42 and 8.34 towards Staphylococcus aureus and Escherichia coli, respectively, under illumination for 60 min at 660 nm with a Thorlabs M660L3 LED (280 mW cm−2). These results demonstrate that 2 is a promising candidate for future in vivo experiments and merits further in-depth investigation.
- Full Text:
- Date Issued: 2021