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Development of a nystatin-loaded micellar system for oral mucoadhesion

  • Authors: Sarpong, Nancy Owusu Akyere
  • Date: 2019
  • Subjects: Medical microbiology , HIV infections -- Treatment Clinical pharmacology
  • Language: English
  • Type: Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10948/43556 , vital:36918
  • Description: Oropharyngeal Candidiasis (OPC) is an opportunistic fungal infection that affects mostly infants and immunocompromised patients. In recent years, the disease has been on the rise due to an increased life span, the HIV pandemic and the increased use of broad spectrum antibiotics. OPC may be treated using a nystatin suspension, which is not as effective as it could be due to the mechanism by which the suspension is applied to the affected tissue. This research aims to improve the effectiveness of nystatin, for the treatment of OPC, by proposing a nystatin loaded micellar system incorporated into a mucoadhesive system for drug delivery. This will ensure that nystatin is gradually released from the film, thus increasing retention time of nystatin at the affected area. In this study, a mixture design was developed, which was used to determine the most appropriate solvent system for nystatin solubilization. Optimisation of the micelle formulation was achieved by using the central composite rational design (CCRD). The two factors that were taken into consideration were the temperature of the hydration medium (water) and the length of time the micellar solution was exposed to the temperature environment of the rotary evaporator. The responses that were investigated were the mean particle size, mean polydispersity index (PDI), mean zeta potential, change in mean particle size and change in mean PDI. The optimal micelle formulation was characterised for size, stability, morphology and drug encapsulation efficiency. The micelles were found to be spherical and stable with an acceptable size range. However, their drug encapsulation efficiency was low. The mucoadhesive film was formulated and characterised for physical characteristics, pliability, percentage swelling index and drug release profile. The film was found to be highly pliable and evenly distributed with a smooth surface; no bumps or bubbles were visible. The film was able to swell to up to 550 %. In vitro studies showed that nystatin was gradually released from the film.
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  • Date Issued: 2019

Development of polypropylene – waste tyre crumbs based tpe's with the aid of vistamaxxtm as a compatibiliser

  • Authors: Masele, Siyamtanda
  • Date: 2019
  • Subjects: Polymers , Polymerization Crumb rubber Rubber
  • Language: English
  • Type: Thesis , Masters , MTech
  • Identifier: http://hdl.handle.net/10948/42589 , vital:36670
  • Description: Polypropylene (PP) is a semi crystalline thermoplastic polymer and one of the most commonly used polyolefins. It is well known for its poor impact resistance; hence, for industries such as the automotive and packaging, reinforced PP is widely used. In general plastic waste disposal is a global crisis raising environmental and human health concerns, with PP being the highest consumed polymer globally; hence a push in the reuse and recycling of PP. Recycled polypropylene has limited uses for industrial applications due to its highly reduced properties owing to the recycling process which inhabits cutting of chains lengths, broadened molecular weight distributions and compromised crystallinity. Several studies have investigated the use of reinforcing fillers and modifiers in order to improve properties of PP. Inorganic materials and minerals such as CaCO3, Mica, Talc and glass fibre are used as fillers to improve mechanical properties (tensile and hardness), but still lacks in improving the impact resistance. Thermoplastic elastomers (TPE) are typically used where elastomer and thermoplastics fail as individual components. This is because they have the benefit of thermoplastic properties at hypo ambient condition and elastomer properties such as good impact and elongation at sub-zero conditions. The study took a route of using PP and waste tyre crumb rubber (CR) material to prepare potentially low-cost waste based TPE’s, which would then inherit both properties of PP and the rubber component. VistamaxxTM 6202 (EPR), a commercial name for ethylene-propylene monomer (EPR), was used as a compatibiliser to improve interaction between PP and CR and to contribute towards the overall improvement of various properties such as mechanical properties. VistamaxxTM has a low glass transition temperature (Tg, = -30 ºC), which is important for low temperature applications such as cold storage; it also has a very high elongation and as a result contributed significantly to the overall properties when used in TPE blends. The study highlighted differences between two TPE compounding formulation pathways; namely master-batch (MB) and design of experiments (DoE). The MB formulations were blends that were prepared by a conventional way of compounding; where a pre-mixed CR/EPR blend, in the ratio of 80(CR):20(EPR), was used to form a master-batch. Results showed that there are some similarities between TPEs prepared in different ways, which suggests that the ultimate properties such as thermal stability are in fact more PP matrix based. Thermal analyses results revealed that when high amount of CR was added to the TPE blends, there was a substantial amount of residue mainly due to inherent carbon black. The degree of crystallinity of the blends decreased with increased amounts of CR irrespective of whether it was the MB or DoE blends. The MB TPE blends demonstrated that hardness is not linked to the amount of the MB nor the crystallinity of blends. Meanwhile, tensile elongation and tensile stress were affected by crystallinity. On the other hand, the impact strength findings showed that the amount of MB in TPE blends reached a threshold at 30%. The DoE based TPE blends demonstrated that the optimum mechanical properties are observed when components of the blends are incorporated individually during compounding. This was observed for impact strength, tensile stress as well as elongation at break. The results showed that the incorporation of EPR should be at least 20% for good impact and elongation properties; however, for tensile and hardness, the PP matrix must be high. The study also showed that, for better mechanical properties it was more suitable to use the blends formulated with DoE, because the master-batch approach limited the improving of the mechanical properties by an addition of up to 30% of both the CR and EPR. The storage modulus as well as the tan delta for both MB and DoE decreased when the elastomeric phases were added on both methods, whereas tan delta Tg values decreased as more of the elastomeric phase was added. Evidence from morphology studies showed that the majority of TPE blends suffer from inadequate distribution and adhesion between PP and elastomer; resulting in poor mechanical properties. Furthermore, a threshold of matrix invasion is observed from 30% and above of CR in the blend, where lack of in capsulated lamps of CR were observed hindering the stress induced crystallization and relaxation of the PP phase. The latter was observed irrespective of the type of blend, which strongly suggests and highlights the limits of blending PP with elastomers. Study demonstrated the ability of VistamaxxTM to be utilized as a binding material for PP and CR and displaying the challenges that might arise when used as a master-batch with crumb rubber.
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  • Date Issued: 2019

Development of silver-based polyaniline nanocomposite for electrochemical oxidation and detection of organosulfur compounds

  • Authors: Shoba, Siyabonga
  • Date: 2019
  • Subjects: Polyethylene -- Analysis , Composite materials Nanocomposites (Materials)
  • Language: English
  • Type: Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10948/43600 , vital:36928
  • Description: Human activities such as combustion of fossil fuels through automobiles, factories and electricity generation using coal results in major productions of sulfur dioxide to the atmosphere. The sulfur dioxide gas chemically reacts with other substances (i.e. water and oxygen) in the atmosphere and produces acidic pollutants. These acidic pollutants exist in both wet and dry form and before they are deposited on the earth’s surface, they can travel long distances carried by the wind. They are deposited in a wet form as rain, snow, fog and sleet and in a dry form as gases or particles. This has led to the mandated 10 ppm S in fuel by the environmental protection agency (EPA). Electrochemical desulfurization (ECDS) has been reported as an innovative technique for removing sulfur via redox processes. ECDS technique is a low costs process as no catalysts and oxidant are involved and it is a green technology (environmental benignity), thus making the process more economical than conventional hydrodesulfurization (HDS) technologies. Modification of electrodes for electrochemistry as well as electrodeposition of metal nanoparticles offers interesting electrochemical activities due to their reduced size and high surface area to volume ratio. Electrochemical oxidation of benzothiophene (BT), dibenzothiophene (DBT) and 4,6-dimethyldibenzothiophene (4,6-DMDBT) was analysed in acetonitrile using carbon electrodes modified with silver (Ag)-polyaniline (PAni) based nanocomposites (GCE/PAni/Ag and GCE/Ag). The PAni, PAni/Ag composites were characterized using spectroscopic (FT-IR, XRD, XPS) and microscopic (SEM and TEM) techniques. SEM confirmed that the synthesized PAni and PAni/Ag presented an amorphous granular morphology with the aggregation of small irregular particle sizes. Cyclic voltammetry of BT, DBT and 4,6-DMDBT on the modified glassy carbon (GCE) electrode show chemically irreversible anodic peaks which corresponds to electron transfer of sulfur to form sulfoxide and lastly sulfone containing compounds. The overall conversion yield of DBT and 4,6-DMDBT to respective sulfones increased as water content increases. Products were characterized by means of gas chromatograph coupled to mass spectrometer (GC-MS), 1H and 13C NMR. Similarly, silver-modified Glassy Carbon (GCE) electrode was used for the electrochemical detection of benzothiophene (BT), dibenzothiophene (DBT) and 4,6-dimethyldibenzothiophene (4,6-DMDBT) in the presence of naphthalene (NP) and carbazole (CR). The electrochemical response of BT, DBT and 4,6-DMDBT on the modified electrode was determined using Differential Pulse Voltammetry (DPV) in acetonitrile. The electrochemical behaviour of BT, DBT and 4,6-DMDBT showed that the modified electrode exhibited excellent oxidation electro-catalytic activity. The dynamic range for the organosulfur compounds determination was from 1 to 11 ppm with detection limits (LOD) of 0.60 ppmS, 0.41 ppmS and 0.21 ppmS for BT, DBT and 4,6-DMDBT, respectively. Electrochemical sensor showed excellent selectivity of the compounds in the presence of interfering compounds such as naphthalene, carbazole and thiourea over the studied range of concentrations. The prepared electrode exhibited satisfactory reusability and stability after four successive measurement. It has been demonstrated in this study that modified glassy carbon (GCE) electrode (GCE/PAni/Ag) can be successfully used for the assay of sulfur containing compounds such as BT, DBT and 4, 6-DMDBT in petroleum samples.
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  • Date Issued: 2019

Development of spunlaced nonwoven filters from PAN, PPS and PI fibres for industrial use

  • Authors: Maduna, Lebo
  • Date: 2019
  • Subjects: Textile fibers -- Mechanical properties , Nonwoven fabrics --Technological innovations Textile fibers, Synthetic -- Mechanical properties
  • Language: English
  • Type: Thesis , Doctoral , DPhil
  • Identifier: http://hdl.handle.net/10948/32610 , vital:32266
  • Description: The aim of this work was to produce filter fabrics suitable for high temperature and other conditions encountered in coal power plants using the spunlacing manufacturing technique. Polyacrylonitrile (PAN), polyphenylene sulfide (PPS) and polyimide (PI) fibres being combined suitable for this purpose, each at three aerial density of (440, 500 and 560 g/m2) and each at three water jet pressures of (60, 80 and 90 bars) were produced. The effect of changing these on the fabric air permeability, tensile strength and filtration properties were investigated and optimized. For this purpose, the Box-Behnken experimental design (BBD) was considered the best and therefore used. The PPS/PI fabrics were found to consistently have the highest air permeability, tensile strength and filtration performance, followed by the PPS fabrics and the PAN fabrics. As could be expected, an increase in area weight and water jet pressure generally resulted in a decrease in air permeability irrespective of the fabric types, this being due to the increased number of fibres and therefore greater fibre surface area and entanglement respectively. For fabric tensile strength, the effects of varying fabric area weight and water jet pressure were not so straight forward. For cross direction (CD) an increase in water jet pressure resulted in an increase tensile strength whereas in the machine direction (MD) there was a decrease when the water jet pressure was increased. The filtration efficiency and dust holding capacity of the fabrics were found to be around 96% and 211g/m2, respectively, with the exception of the PPS (500 g/m2 80 bar) fabrics. Increasing the amount of dust being fed to the fabric during each loading cycle, it caused an increase in pressure drop, as the fabrics became increasingly clogged forming a cake layer.
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  • Date Issued: 2019

Development of titanium dioxide for photo-electrochemical hydrogen production

  • Authors: Mbulanga, Crispin Munyelele
  • Date: 2019
  • Subjects: Titanium dioxide , Nanostructured materials Water chemistry Environmental chemistry
  • Language: English
  • Type: Thesis , Doctoral , PhD
  • Identifier: http://hdl.handle.net/10948/40735 , vital:36231
  • Description: TiO2 is an attractive material for photo electrochemical hydrogen production and in this work the synthesis of this compound by hydrothermal, gel-calcination and one-step templating methods is investigated. Rutile-phase TiO2 rods, which are known to offer direct electrical pathways for photo generated electrons when using TiO2 as a photo anode in a photo-electrochemical hydrogen cell, were prepared on both F:SnO2 (FTO) coated glass and Ti foil substrates. Anatase-phase TiO2 tubes and mixed rutile-anatase-phase TiO2 nanostructured films were developed on FTO-coated glass substrates. Rutile-phase TiO2 rod-like structures, were synthesized hydrothermally at 150 oC for different times (6 – 20 hours) on FTO-coated glass substrate, in an aqueous solution of hydrochloric acid and titanium butoxide. The rod-like structures were found to comprise bundles of crystalline prismatic TiO2 nanorods, each approximately 4 nm in width. Each bundle was tetragonal in shape and highly oriented with respect to the substrate surface. The average diameter of the bundles varied depending on the growth time, and reached a mean diameter of ~175 nm after 20 hours of growth. In terms of Raman scattering, these bundles of nanorods acted as single entities, appearing to act as “larger” crystals to the lattice phonons. Hence, phonon confinement effects could not be observed, because the translational symmetry is preserved at the boundaries between individual rods. Moreover, as the preferential perpendicular orientation of the bundles improved with growth time, an unusual increase in the room and low (77K) temperature Eg/A1g Raman band intensity ratios was observed. The low temperature Raman peak position and peak width data was interpreted as supporting the hypothesis that the bundles of nanorods acting as single entities from the point of view of the lattice phonons. The phonon symmetries and frequencies (in cm-1) of these bundles of rutile-phase TiO2 were found to be consistent with rutile-phase TiO2 phonon symmetries and frequencies. Rutile-phase TiO2 rod-like structures were prepared on Ti foil following a two-step gel-calcination method, which involves a gel-deposition process in 5 M NaOH solution at 76 oC for 24 hours to produce a Na- (and Ti-) based layer of gelatinous material, followed by calcination at 600 oC or 800 oC for 1 hour. It is shown that the use of an alkali-based solution such as NaOH and KOH during gel-deposition, leads to the formation of faceted nanorods of rutile-phase TiO2 upon calcination at high temperature. When a solution that does not contain any alkali element, such as H2O2, was used, the material formed upon calcination at 800 oC were clustered nanoparticles, rather than nanorods. From the experiments it was deduced that the high temperature calcination step converted the Na(or K)-based amorphous gel (formed on the Ti surface during a 24-h soak in NaOH (KOH) solution) into faceted Na-titanate rods, which converted into nanorods of rutile-phase TiO2 when Na(or K) evaporates in the form of an oxide. Anatase-phase TiO2 tube-like structures were produced by a one-step templating solution approach, on FTO-coated glass substrate. ZnO nanorod templates were prepared by chemical bath deposition on FTO-coated glass substrate, and then treated in an aqueous mixture of ammonium hexafluorotitanate and boric acid. To study the effect of the template morphology and deposition processes on the formation of anatase TiO2 tubes, different times (10 – 60 minutes) and concentrations of the precursors are used. Calcination at 550 oC converted the Ti-based material developed on the ZnO rods into TiO2 nanostructures. A 10 minute deposition yielded tubes with dimensions resembling those of the ZnO template. However, the tube walls still contained Zn traces. Based on experimental observations, it was concluded that the production of titanium hydroxide complexes on ZnO surfaces takes place through two competing processes: the development of a Ti-based material and partial dissolution of ZnO along the c-axis. Calcination at 550 oC in air finally yielded anatase TiO2. Mixed rutile-anatase-phase TiO2 nanostructured films on FTO-coated glass substrate were prepared by decorating bundles of crystalline prismatic TiO2 nanorods (prepared hydrothermally) with anatase-phase TiO2 particles, using the same precursors mentioned above. The effect of reaction time and precursor concentrations were investigated. It was found that the precursor concentration ratio and reaction time played key roles in controlling the decoration process. Optimal ratios and decoration times were established based on the density of anatase-phase TiO2 decorating particles on the surface of bundles of rutile-phase TiO2 nanorods. The optical properties of rutile-phase TiO2 rods were investigated. The thickness of the TiO2 layer was calculated from reflectance fringes, and agreed well with the length of rods observed using SEM. The room temperature absorption edge of Eg=2.90 eV extracted from the transmittance spectrum correlated with typical values reported for TiO2. The room temperature absorption edge of the conductive layer of F:SnO2 (Eg=3.56 eV) could also be extracted from the transmittance spectrum. Finally, the absorption of white light by rutile-phase TiO2 rods was confirmed to be enhanced by annealing the rods in either hydrogen or nitrogen at 600 oC. Defects (possibly oxygen vacancies) or disorder in the near surface layers of TiO2 induced during the reduction experiments, created new electronic states in the band gap, as reported in literature.
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  • Date Issued: 2019

Devulcanisation of truck tyre tread vulcanisates in supercritical carbon dioxide using diphenyl disulphide and 2,2- dithiobis(benzothiazole)

  • Authors: Mabuto, Briswell , Ogunlanja, A
  • Date: 2019
  • Subjects: Vulcanization , Polymeric composites Rubber Carbon dioxide -- Thermal properties Environmental chemistry
  • Language: English
  • Type: Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10948/40702 , vital:36224
  • Description: A lot of work has been done in the recycling industry in an effort to increase the amount of reclaimed rubber used in new tyre formulations. The major drawback has been inferior physical and mechanical properties of reclaimed/virgin rubber blends in comparison to the virgin rubber material. Deterioration in these properties has been identified to be a result of chain degradation during reclamation processes as well as presence of crosslinks in the final reclaim product. Devulcanisation techniques have gained precedence due to the relatively improved properties of devulcanised/virgin rubber blends. The concept of devulcanisation is to reverse vulcanisation, resulting in total or partial cleavage of crosslinks. In this way, chain degradation is minimised while crosslink scission is maximised, thereby resulting in good quality devulcanised rubber. However, due to the persistence of chain degradation and crosslinks during devulcanisation processes, a very limited number of reports have claimed success in achieving this goal. Therefore there is still the need to develop a devulcanisation method that ensures improved quality and productivity of devulcanised rubber. Typical truck tyre tread vulcanisates were used for optimisation of time, temperature, heating rate, pressure and amount of devulcanising agent while monitoring percentage devulcanisation in supercritical carbon dioxide medium. Optimisation of the devulcanisation conditions was done by employing a twolevel central composite design in the isothermal and non-isothermal heating stages. This was followed by a single factor analysis of devulcanisation conditions in the non-isothermal stage. The effect of the presence of carbon black was investigated by comparing the percentage devulcanisation of carbon black filled and unfilled samples. The results show that supercritical carbon dioxide is an effective medium of devulcanisation using diphenyl disulphide (DD) and 2,2-dithiobis(benzothiazole) (MBTS). The relatively higher degree of devulcanisation observed during the non-isothermal stage compared to the isothermal stage, led to a shift of focus to non-isothermal devulcanisation. Temperature and time were found to have a significant antagonistic effect on the percentage devulcanisation, while changes in pressure above critical point and mass of devulcanising agent showed no effect on percentage devulcanisation. The heating rate was determined by the set-point, of which 180 ℃ set-point temperature resulted in desirable degree of devulcanisation for both DD and MBTS. 76.18 ± 5.50 % devulcanisation in 5 minutes at 102 ℃ was observed for DD whilst 70.92 ± 4.10 % devulcanisation in 4 minutes at 97 ℃ was observed for MBTS. Changes in pressure above critical point and mass of devulcanising agent used in devulcanisation showed no significant effect in the percentage devulcanisation and so they were kept constant at 80 bars and 1.00 % v (of weight of rubber sample) devulcanisation agent, respectively. The presence of carbon black was found to have an effect on the degree of devulcanisation; 87.95 % and 81.33 % devulcanisation was observed for unfilled samples devulcanised using DD and MBTS respectively. Thermogravimetric analysis of the natural rubber/styrene butadiene rubber (NR/SBR respectively) relative composition of devulcanisates indicated uneven devulcanisation when using DD, whereas MBTS did not show any form of preference. DD showed preference for NR devulcanisation over SBR. Further analysis of the sol and gel fractions were performed using; Differential Scanning Calorimetry, Fourier Transform Infrared Spectroscopy, Gel Permeation Chromatography and Gas Chromatography coupled with Mass Spectroscopy. Application of the optimised conditions to devulcanise ground tyre rubber (GTR) resulted in relatively lower degrees of devulcanisation for both DD and MBTS; 41.22 ± 4.22 and 22.41 ± 1.97 respectively. The differences in the degree of devulcanisation of the laboratory prepared vulcanisates and the GTR was determined to be due to sample differences; i.e. sample constituents, particle dimensions and crosslink network (crosslink distribution in particular).
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  • Date Issued: 2019

Early Jurassic dolerites of the Karoo Large Igneous Province ( KLIP): an analysis of their age and emplacement history from sea level to the Drakensberg Mountains in the Eastern Cape , South Africa Submitted

  • Authors: Muedi, Thomas Tshifhiwa
  • Date: 2019
  • Subjects: Geological time , Geochemistry Geology -- South Africa
  • Language: English
  • Type: Thesis , Doctoral , PhD
  • Identifier: http://hdl.handle.net/10948/41908 , vital:36608
  • Description: South Africa hosts one of the largest Large Igneous Provinces (LIPs that is likely linked to the early separation of East and West Gondwana. However, despite many studies, the relationship between dolerites and volcanic basalts of this LIP (also known as the Karoo Large Igneous Province or KLIP) remains unsolved, because of poorly linked age dates (timing), geochemistry and emplacement mechanisms. This problem is in part because different unreliable dating techniques with large margin of errors have been applied This study aims to address these issues by performing new geo chemical and high resolution geochronological analyses on a number of dolerites (sills and dykes), volcanic s also referred to in the literature as the Drakensberg flood basalts) and samples from drill cores and field outcrops. This project is focused on dolerites in the Eastern Cape Province and provides results from field mapping of dolerites (sills and dykes) from the sea level to an elevation of circa 1350 metres above sea level (MASL) and their link to the volcanic in the Eastern Cape Province. The dolerite dykes observed trends from metres to hundreds of kilometres and cut across volcanic, which have similar geochemistry. The intrusive dolerites collected from the field and from d rill core samples were likely emplaced by magma infiltration through pre-existing sub vertical brittle fractures and fissures and then emplaced horizontally as sills circa 183 Ma Detailed fracture mapping across host rock to the dolerite was carried out to test if they acted as possible pathways for magmatic emplacements. The dolerite dykes and fractures mapped in the host sedimentary rocks have a dominant NW direction, especially towards volcanic basalts. The project provides tests based on the geochemical relationships of the dolerites and basalts from sixty-six (66) cores and field outcrop samples. The results confirm that the chemical analyses from the volcanic basalts an d dolerites are closely related and reveal that most samples are Ocean Island Basalt OIB), but some also reveal subduction related processes. This is consistent with models that suggest subduction along south west Gondwana may have influenced plumemagmatism derived from the lower mantle that initiated break up of this supercontinent e.g de Wit and Stern 1981 Storey et al , 1992 ; Torsvik et al., 2006 and Burke et al., 2008)
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  • Date Issued: 2019

Ecological assessment and biogeography of coastal vegetation and flora in southern Mozambique

  • Authors: Massingue, Alice Obed
  • Date: 2019
  • Subjects: Coastal plants -- Mozambique , Coastal plants Marine biodiversity -- Mozambique Coastal biodiversity -- Mozambique
  • Language: English
  • Type: Thesis , Doctoral , PhD
  • Identifier: http://hdl.handle.net/10948/40988 , vital:36280
  • Description: This study considered aspects of the vegetation of the coastal zone of southern Mozambique, an area with a rich biodiversity. The vegetation and flora were assessed in their current state including the associated anthropogenic pressures. The environmental conditions that determined the distribution of the vegetation were evaluated. A hierarchical classification, description and ecological interpretation of the vegetation and flora of the coastal zone in southern Mozambique are presented. Analysis was based on 242 sample quadrats that were distributed in a stratified manner throughout the study area. The vegetation could be grouped into six distinct types of vegetation: Dune Forest, Coastal Forest, Coastal Grassland, Coastal Miombo, Coastal Savanna and Coastal Woodland. Species diversity was high for the all the vegetation types, particularly in the woody elements. A total of 673 species in 410 genera was recorded. They represented 104 families with Fabaceae and Rubiaceae being the most common. Of these, 6.6% were endemic or near-endemic to the coastal zone of southern Mozambique with Coastal Forest being the habitat with the greatest endemism. All soils from different vegetation types had poor agricultural potential. Soil properties were the strongest defining environmental feature separating the vegetation types: e.g. pH was high in Dune Forest compared to the others. Results from Maxent modelling suggest that the distribution of endemic species is influenced by a combination of climatic and non-climatic variables. Soil type, temperature annual range and precipitation of the driest month were the most important predictor variables. Overlaying the potential distributions of the seven selected species indicated two areas of abundance of endemic species – these should be given attention for conservation. Endemic species are not well protected in southern Mozambique – their sampled and potential habitats are largely outside protected areas. Hence, additional reserves should be created to improve their protection. Most endemic and near-endemics species were found in the south, from Ponta de Ouro (Matutuine, south of Maputo Province) to Manhica district (north of the Maputo Province) forming part of the Maputaland Centre of Endemism. A second concentration of endemism was found in the Inhambane Province, specifically the Inhassoro and Vilanculos districts. This is proposed to be an Important Plants Area (IPA). Because most endemics and near-endemics are found in the Coastal Forest, their main threat is harvesting for charcoal production, although none of the endemic species are specifically targeted for charcoal production. In Inhambane they are also threatened by the tourism industry, agriculture and settlements. The impact of the habitat destruction on endemic species is expected to cause severe declines in the near future. The tourism industry and harvesting of trees for charcoal production and over-frequent fires are the main drivers of vegetation loss in this region. Shifting agriculture, harvesting for firewood and construction materials, cattle grazing (at a minor scale) are also impacts, but these were only observed in a small area of Maputo Province. Although the study was done in coastal zone of southern Mozambique, effective management of whole coastal zone of the country will be required to maintain a functioning and diverse ecosystem. Priorities for management are to ensure that forests are protected, in particular, Dune Forest. Actions are required to minimise degradation of coastal vegetation. Further research on Coastal Forest restoration should be planned, as field observations in this study confirm that forest in the coastal zone of southern Mozambique has resilience.
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  • Date Issued: 2019

Effect of single-walled carbon nanotubes on various properties of reclaimed rubber/natural rubber blends

  • Authors: Gumede, Jabulani Innocent
  • Date: 2019
  • Subjects: Carbon nanotubes , Nanotubes Nanostructured materials Polymers
  • Language: English
  • Type: Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10948/39675 , vital:35347
  • Description: Mechanical and thermal processes are the preferred methods used to reclaim rubber from waste tyres. However, these methods produce reclaimed rubber (RR) with poor quality and lowered properties compared to virgin rubber. As a result, RR is commonly blended with virgin natural rubber (NR) in order to enhance its quality and properties to widen its application scope. The use of RR in the production of new rubber products is however limited to only about 1-10%. This is because the amounts of RR above this percentage negatively affect the properties of the resultant RR/NR blends. Researchers have used various conventional and nonconventional fillers such as carbon black and maize stalk fibres, respectively, in an attempt to enhance the properties of RR/NR blends. One main disadvantage with the use of these fillers is the need for high quantities to achieve desired properties. Several researchers have therefore focused on developing other reinforcing fillers. The fillers that have recently attracted a lot of attention of the present researchers include single-walled carbon nanotubes (SWCNTs), which are very small tubes solely made up of carbon molecules. This is because SWCNTs offer many impressive properties, and even small quantity of these nanofillers is sufficient to achieve desired properties due to their small size, large surface area and high aspect ratio. The main challenge with the use of SWCNTs however is getting them to disperse well in the rubber matrix. Therefore, their surface is either modified and then mixed with rubber or a dispersant is used to disperse them in the rubber matrix, forming a masterbatch. The common nanomaterial masterbatch product for applications in rubber is the TUBALLTM RUBBER (TR), which is a masterbatch product consisting of 1 wt. % TUBALL™ SWCNTs dispersed, using 1.5 wt.% sulfonol as a dispersant, in 97.5 wt.% NR (from latex Taytex FA). This product is a versatile masterbatch designed to enhance the mechanical, chemical, electrical and thermal properties of rubbers since it contains SWCNTs. However, the performance of this product has not been explored in the cases where recycled/reclaimed rubber is used. The main aim of this project was therefore to explore the effect of SWCNTs (via using TR) in the formulations of RR/virgin NR blends. This project was divided into two parts; (i) optimisation of SWCNTs based on tensile properties of specific formulations of compounds. These compounds were prepared by mixing various amounts of TR and NR using a Banbury internal mixer and two-roll mill. (ii) the effect of the addition of SWCNTs from the optimum SWCNTs/NR masterbatch compound on curing, mechanical, aging, dynamic mechanical and thermal properties of RR/NR blends was studied. Curing properties explored include minimum torque (ML), maximum torque (MH), scorch time (ts0.5), curing time (t90) and cure rate. Mechanical properties studied are tensile strength, modulus at 100%, 200%, 300% and 500% elongation, elongation at break, hardness and resilience. Dynamic mechanical properties include stiffness, storage modulus (E'), loss modulus (E''), loss tangent delta (tanδ) and glass transition temperature (Tg). Thermal degradation (stability) was studied by means of thermogravimetric analysis (TGA) for analysing the effect of SWCNTs inclusion on RR/NR blends. The optimum SWCNTs/NR masterbatch compound contained 0.1 wt. % of SWCNTs. The results obtained for various properties indicate that SWCNTs from the optimum SWCNTs/NR masterbatch compound enhanced the curing, mechanical, aging and dynamic mechanical properties of RR/NR blends with lower RR loading. Thermal properties of RR/NR blends were found to be unaffected by the addition of SWCNTs. However, owing to their impressive properties, the use of SWCNTs as nanofillers in RR/NR blends have the greatest potential for extending the applications of RR/NR blends.
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  • Date Issued: 2019

Elucidating the Molecular Basis of the Interaction between the β2-integrin, αXβ2, and the low-affinity IgE Receptor, CD23

  • Authors: Clarke, Stephen
  • Date: 2019
  • Subjects: CD23 antigen , Immune response Cellular immunity Molecular immunology
  • Language: English
  • Type: Thesis , Doctoral , PhD
  • Identifier: http://hdl.handle.net/10948/37990 , vital:34277
  • Description: The low affinity IgE receptor, CD23, is involved in a myriad of immune reactions. It is not only a receptor for IgE, but also functions in the regulation of IgE synthesis, isotype switching in B cells, and induction of the inflammatory response. These effector functions of CD23 arise through its interaction with another leukocyte-specific cell surface receptor – the β2 integrin subfamily. However, this interaction has not been fully described. It has been shown that CD23 is capable of interacting with the β3 and β5 integrin β-subunit of integrins via a basic RKC motif in a metal cation-independent fashion. The currently proposed mechanism for the interaction between CD23 and the integrin superfamily was applied to the β2 integrin subfamily. In this study the interaction was probed for whether or not the RKC motif governs the interaction as well. This was done by performing bioinformatics docking predictions between the CD23 and αXβ2 integrin proteins. This revealed that in the absence of cations, the RKC motif is involved in interaction with the integrin αI domain. However, since physiologically integrin activity has been shown to be regulated by metal cations, docking predictions were also performed in the presence of such cations. This showed the interaction to involve novel acidic motifs within the CD23 protein, GEF and LDL. This same pattern of interaction was seen in docking predictions between CD23 and the β2- and β3I-like domains. To further investigate, recombinant proteins of sCD23 and the αXI domain were produced using E. coli expression systems. The DNA sequence was mutated to produce mutant versions of the CD23 RKC and GEF motifs as well as a high-affinity locked αXI domain. These proteins were used in subsequent SPR spectroscopy analysis of the binding affinity between immobilised integrin and CD23 analyte. It was shown that the mutation within the RKC motif reduced the binding affinity under cation-independence, especially when the Arg172 residue was substituted. However binding was not completely lost. This result was supported by synthetic peptides containing the same RKC motif and substitutions. These showed complete loss in binding in the double RKΔAA substitution, suggesting the involvement of other residues in the RKC-dependent interaction. In contrast, under cation dependence, the RKC motif substitutions showed no effect on binding affinity, while the GEF motif substitution exhibited near complete loss in binding. This same effect on binding was validated by U937 cell-based ELISA using live cells. This showed decreased capture of differentiated U937 cells, expressing the αXβ2 integrin, by immobilised recombinant sCD23 protein. In this study it was noted that, 2 contrary to the SPR analysis, metal cations allowed for a higher titre of cells to be captured in comparison to the cation-free binding.
  • Full Text:
  • Date Issued: 2019

Energy yield modelling and analysis of photovoltaic systems in Namibia

  • Authors: Dobreva, Petja
  • Date: 2019
  • Subjects: Photovoltaic power systems , Photovoltaic power generation Photovoltaic power generation -- Mathematical models
  • Language: English
  • Type: Thesis , Doctoral , PhD
  • Identifier: http://hdl.handle.net/10948/39523 , vital:35287
  • Description: Generation of electricity from solar energy by photovoltaic systems has the potential to reduce dependence on non-renewable sources for electrical energy production. It can also reduce the cost of electricity for consumers by moving away from the traditional models of centralised generation combined with extensive transmission. The prices of photovoltaic system components have decreased so dramatically in recent years that nowadays a large portion of the cost of electricity produced by photovoltaic systems is due to the cost of investment capital rather than the cost of the physical parts of the system. The cost of capital is determined by the perceived risk of the investment and is contingent on predictive models whose aim is to project outputs reasonably achievable by the system. The output of a photovoltaic system depends strongly on external factors, like solar radiation and temperature, as well as internal, system specific factors. Models that can accurately predict the output of a photovoltaic system have direct impact on investment cost. Several measures, like root-mean-square-error or coincident of determination, have been used in the past to assess accuracy of models but they appear to be inadequate for the task. I suggest a new method, comprising qualitative and quantitative measures, for model evaluation and introduce two new quantities to assess the predictive capabilities of the models. Models of several photovoltaic systems in Namibia were created, the new evaluation approach was applied to them and the results were compared to the conclusions that would have been drawn if the old measures were used. Outdoor current-voltage measurements are used to assess the power output and general state of the solar generator of a photovoltaic system, but the measured values strongly depend on irradiance and temperature. The prevailing approach has been to transform the current-voltage characteristics to standard-test-conditions with the so-called translation equations and then compare the translated power to the nominal value. The translated value of the power, however, depends on the translation equations used and is not necessarily an accurate reaction of the state of the solar generator. I have proposed a new method for assessment of the state of the solar generator that relies only on the measured quantities and does not require translations to standard-test-conditions. This alternative method has been used in the assessment of the condition of the solar generators in the systems included in this study.
  • Full Text:
  • Date Issued: 2019

Epibenthic biodiversity, habitat characterisation and anthropogenic pressure mapping of unconsolidated sediment habitats in Algoa Bay, South Africa

  • Authors: Truter, Hannah Jessie
  • Date: 2019
  • Subjects: Aquatic ecology , Marine sciences Conservation biology Ecology
  • Language: English
  • Type: Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10948/43812 , vital:37049
  • Description: Implementation of an ecosystem-based management approach for marine systems requires a comprehensive understanding of the biophysical marine environment and the cumulative human impacts at different spatio-temporal scales. In Algoa Bay, South Africa, this study describes the epibenthic communities occurring in unconsolidated marine habitats. It further investigates the potential abiotic factors that influence their distribution and abundance, compares epibenthic communities with existing habitat information and evaluates the protection status of the marine environment in the Bay. Seabed imagery, covering a total area of 171.4m², and sediment samples were collected from 13 stations from which 106 epibenthic species were identified. Multivariate analyses revealed two statistically distinct communities that did not align with the Algoa Bay benthic habitat types defined in the current National Biodiversity Assessment (NBA, 2012). Further assessment indicated that community differences were driven by the presence of rock substrate. A range of abiotic factors were tested against the epibenthic communities to explore patterns and identify potential drivers. The combination of abiotic factors depth, mean grain size, mean bottom temperature and mean bottom current explained 55% fitted variation in epibenthic data. The degree of long-term variability in several of these parameters were likewise identified as explanatory variables, including bottom temperature, current speed and dissolved oxygen. The link between abiotic factors and the epibenthic communities observed indicate that these variables can act as surrogates for habitat mapping in the future. The existing and proposed Marine Protected Area (MPA) in conjunction with the NBA 2012 habitat types does well in protecting the majority of habitats in the Bay, however there remain habitats that lack protection. Utilising the benthic communities and potential drivers identified in this study, the proposed MPA boundary delineations should be somewhat altered to include missing habitat types.
  • Full Text:
  • Date Issued: 2019

Examining the influence of extrinsic factors on herbivore assemblage composition in a southern African savanna

  • Authors: Young, Cyanne , Smithwick, Erica
  • Date: 2019
  • Subjects: Herbivores -- Ecology , Ungulates -- Ecology Mammal populations -- South Africa
  • Language: English
  • Type: Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10948/44334 , vital:37154
  • Description: Globally, herbivore populations have become threatened by the effects of a growing human population. This has resulted in over-hunting, habitat encroachment, fragmentation and degradation and competition leading to the replacement of wild herbivore populations with livestock. African herbivores, in particular, have experienced a severe decline in abundance and distribution, and vast conservation management efforts are underway to preserve herbivore populations and promote their growth. However, conservation management efforts sometimes have unintended consequences on the abundance and distribution of herbivores as a result of the complex interactions they have with their ecosystem. The aim of this study was to: 1) examine the drivers of herbivore distribution at the Satara section of Kruger National Park (hereafter ‘KNP’) at a landscape scale, to determine assemblage composition under the constraints of different environmental attributes; and 2) examine feeding selection by grazing herbivores of different morpho-physiological characteristics at a patch scale of differing environmental attributes. To achieve this, thirty-six experimental plots were established at three distances from water at Satara, and manipulated by mowing, mowing and fertilising or fertilising only over the course of a year, to account for seasonal effects. Each plot was fitted with a camera trap which ran for five weeks in each sampling season, and the data collected focussed on eleven herbivore species of differing body size, digestive strategy and feeding preference. These species were selected due to their abundance at Satara, and their representation of a variety of morpho-physiological characteristics. To achieve both aims, generalised linear models were used to determine the probability of occurrence of a functional type (for aim 1- Chapter 3), and individual species (for aim 2- Chapter 4). To construct the generalised linear models for Chapter 3, hypotheses about species’ relative distribution and abundance were developed through a literature review of forage and water availability constraints on feeding preference and body size of herbivore biomass at a landscape scale. I expected strong seasonal relationships between vegetation biomass and quality, and biomass of water-dependent herbivores with increasing distance to water. My analyses of herbivore distribution across the region confirmed broad-scale descriptions of interactions between forage requirements and water availability, across a set of species which differ in functional traits, at a landscape scale. In Chapter 4, trends in probability of occurrence by seven grazing herbivore species were determined using camera trap data at a patch scale. My results showed that season was a major determinant of species distribution, especially those which are not obligate grazers or feed exclusively in the 0.5 km to 2 km zone from water. I found that most selective feeding occurred in the late wet season when water would be more evenly distributed across the landscape and forage resources close to water would have had the chance to recover from depletion as a result of dry season use. The collective efforts of this study show that distance from water was a critical determinant of herbivore distribution across the landscape, and that forage utilisation by small mixed-feeders and large grazers in particular, altered significantly across seasons. This has important implications for the provision of artificial water, given that foraging pressure is increased closer to water. Landscape heterogeneity needs to be maintained through efficient water provision, to allow areas of forage reserve to maintained in the dry season, where species are constrained by water availability and forage quality and quantity.
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  • Date Issued: 2019

Exploring the influence of management practice on mesopredator and herbivore occupancy and interactions

  • Authors: Winterton, Deborah Jean
  • Date: 2019
  • Subjects: Herbivores -- Habitat -- Conservation , Herbivores -- Habitat Herbivores -- Conservation Herbivores -- Ecology
  • Language: English
  • Type: Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10948/44368 , vital:37159
  • Description: Ecological studies need to consider ecological interactions between species and their environment across trophic levels. This complexity not only makes the study of ecology very challenging but it also means that ecosystems are vulnerable to change as a disruption at any of the levels could result in cascading effects through the hierarchy. This sensitivity to change makes it especially important to understand ecosystem function as this is needed for effective and adaptive conservation management. A key way in which humans drive and change ecosystem function is through land use and associated management practice. A primary objective of many protected areas is restoration of natural function through re-introduction of large ungulates, which are often fenced and small, thus requiring intensive management that can influence ecosystem function. This is true of the West Coast National Park (the park). Small antelope abundance, and associated drivers, in the contractual Postberg section of the park have been a long-term management question. Postberg is a small (1800 ha) fenced and isolated section of the park which was historically used for agriculture (livestock grazing and some cultivation) and later large wild ungulate species were re-introduced and kept at high densities. The perception of a lower abundance of small antelope has been attributed to predation by a mesopredator (Caracal caracal), however interspecific competition and habitat quality is also known to influence species abundance. Therefore, I aimed to explore the potential mechanisms of small antelope occurrence in the region and how this might differ across three sites with different management practices. Using 18 camera traps, I documented the occurrence of small, medium and large ungulates and caracal. My study spanned across three areas that each represented different forms of management practice with regards to fencing, and stocking rates of managed ungulate species. I made use of single-season, single-species occupancy models in R to assess occupancy of small antelope and caracal and I used the abundance induced heterogeneity model to estimate abundance of managed ungulates. I employed the single-season, two-species occupancy model in PRESENCE to explore species co-occurrence and interactions. Activity patterns and temporal overlap between managed ungulates, small antelope and caracal were assessed using the overlap and activity packages in R. Vegetation height appears to be an important driver of common duiker occupancy. Fallow lands were strongly favoured by managed ungulates suggesting that they may be utilising these patches for foraging. Small antelope occupancy was highest outside of the park and caracal detections were lowest outside of the park. The low detection of caracal across all areas, along with the known diet of caracals, suggests that predation is not likely the driver of small antelope occurrence. Our data suggest that co-occurrence between small antelope and managed ungulates is high and that these sympatric species have probably partitioned food resources. I found that small antelope were mostly crepuscular, managed ungulates more diurnal while caracal were primarily nocturnal. There was a high overlap between small antelope and managed ungulate activity while overlap between caracal and small antelope indicates some temporal partitioning. Overall I found some effects of inter-specific interactions at the local scale. There was, however, no consistent pattern across the areas which, in line with literature, suggests large scale ecological trends are difficult to detect at local scales. Due to the heterogeneity of the region’s vegetation, coupled with the small size of the biome and extensive fragmentation by land use, there are few areas which adequately represent the biome to test how large ungulates would utilise the area at a large scale. This has important implications for the management of small protected areas in the region who are mandated to restore these areas to their historical and natural function. The ability of conservation managers to meet objectives of restoring parks to their historical function, and maintaining these systems as such, may be questioned if our protected areas are not meeting the spatial requirements of re-introduced species.
  • Full Text:
  • Date Issued: 2019

Finding Frankenflora: investigating hybridisation between local and introduced Protea species at the Van Stadens Wildflower Reserve

  • Authors: Macqueen, Timothy
  • Date: 2019
  • Subjects: Proteaceae -- South Africa , Proteaceae Trees -- South Africa Hybridization
  • Language: English
  • Type: Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10948/40724 , vital:36230
  • Description: This study provides an overview of hybridisation and methods to detect it in plants. This is documented in chapter 1. Another aim was to identify hybridisation between local and non-local species in the Proteaceae. This is covered in chapter 2. Finally the third aim was to develop a cheap and rapidly working method of detecting hybrids in this system. This is detailed in chapter 3. The model system for this research is the Van Stadens Wildflower Reserve. In 1984 the reserve manager introduced the non-local species, Protea susannae from Cape Agulhas. This represents a long-distance dispersal of over 600 km. This study is focused on looking at the impacts of the introduction of P. susannae on the local species P. eximia. I use genetic and morphological methods to detect hybrids. Hybridisation and the methods implemented to identify it are reviewed and discussed (Chapter 1). Morphological traits of the two species and direct sequencing of the nuclear ITS and chloroplast regions are compared (Chapter 2). This includes notes on the detection of hybrids and the potential for cryptic hybrids. I also focussed on testing of two rapid and low-cost techniques for detecting hybrids using Species Specific Primers (SSP’s) and High Resolution Melt (HRM). The Sanger sequencing method and ITS detected cryptic hybrids. The HRM was able to detect hybrids when comparing F1 putative hybrids to a ‘pure’ parent populations, but was not able to detect between a ‘pure’ parent population and F3 or F4 putative hybrids in the Van Stadens system. The SSP’s had the highest hybrid detection rate. Genetic methods, specifically the SSP’s were found to work well to detect hybrids in an environment where a hybrid swarm has taken place. The maps produced from this thesis will be useful for determining the distribution of hybrids in the reserve and for other similar hybrid systems. Long distance dispersal of Cape species may lead to the loss of genetic diversity or species as local and non-local hybridisation may occur, similar to the hybridisation between P. susannae and P. eximia in the Van Stadens Wild Flower Reserve. Genetic methods were shown to be superior to morphological hybrid detection (i.e. Sanger sequencing and SSP’s). The SSP approach tested here, which is dependent on the presence of fixed species specific SNP’s (Single Nucleotide Polymorphisms), could offer a rapid and effective method to explore hybridisation through space and time.
  • Full Text:
  • Date Issued: 2019

First report on carbon storage in warm-temperate mangroves of South Africa

  • Authors: Johnson, Jaime Leigh
  • Date: 2019
  • Subjects: Mangrove ecology -- South Africa , Mangrove conservation Mangrove plants Mangrove management
  • Language: English
  • Type: Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10948/31563 , vital:31581
  • Description: Blue carbon is defined as the carbon sequestered and stored by coastal vegetated ecosystems including mangroves, seagrass and salt marsh. Research on blue carbon has rapidly escalated during the past decade following the 2009 United Nations Environment Program (UNEP) report, which highlighted the efficiency of these coastal habitats to act as carbon sinks. Mangrove forests in particular have been recognized for their significant role as carbon sinks and therefore have been prioritized in atmospheric carbon mitigation strategies. Despite global research efforts, there is still a notable knowledge gap on carbon storage potential of different mangrove tree species in underrepresented geographic regions. This study provides the first comprehensive assessment of blue carbon for a mangrove forest in a warm temperate estuary in South Africa. Carbon storage was quantified for Avicennia marina mangrove stands at the Nxaxo Estuary; using both elemental analysis and loss on ignition (LOI) techniques for sediment carbon pools and only elemental analysis for aboveground biomass (leaf litter, pneumatophores, wood).The environmental characteristics were the same at the five sites sampled and this was related to the estuary being well-mixed and permanently open to the Indian Ocean. Unexpectedly the carbon content was weakly correlated with that measured by elemental analysis. The cause of this is unknown and could potentially be an avenue for further investigation. The carbon content measured from elemental analysis was used in further calculations, as this method is reliable and meets global standards for comparisons. For the aboveground carbon pools, the pneumatophores (2.1 × 10-3 Mg C ha-1) stored significantly more carbon compared to the live trees (3.35 × 10-4 Mg C ha-1) and leaf litter (2.84 × 10-6 Mg C ha-1). The sediment carbon pool (228.05 Mg C ha-1) stored significantly more carbon than the aboveground carbon pools, which is in line with the findings of other studies from different regions. Sediment carbon storage was not related to mangrove tree population structure or sediment characteristics, such as moisture content and particle size. However, sediment carbon storage was highest at Site 2 which was located in a depositional area of the estuary. The total carbon storage is 1140.25 Mg C for the mangrove area of 9.5 the Nxaxo Estuary; this is considerably lower than what has been recorded for other regions. In South Africa, mangroves in warm--temperate regions occur at one of the southernmost limits globally and are restricted to occurring in sheltered estuaries due to the high--energy nature of the coastline. As a result, the growth and productivity of mangroves in these regions can be influenced by estuarine and climatic dynamics. Although total carbon storage was not variable between different sites at this estuary, this might not be the case on a regional scale as variability is expected to occur between estuaries within South Africa. Comparing the data collected from this study and others done globally, it is clear that the capacity for carbon storage by mangroves is variable. Therefore, regional scale blue carbon studies should be undertaken to provide estimates from direct quantification and allometric equation approaches. Carbon storage has been recognized as a valuable ecosystem service; therefore, going forward, accurate estimations of storage potential is essential, particularly for climate change mitigation and emission offset projects.
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  • Date Issued: 2019

Germination potential of seeds harvested at the Worcester Veld Reserve

  • Authors: Swart, Rudi
  • Date: 2019
  • Subjects: Ecological disturbances -- South Africa -- Karoo , Environmental degradation -- South Africa -- Karoo
  • Language: English
  • Type: Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10948/43923 , vital:37084
  • Description: The rangelands of the Succulent Karoo and Nama Karoo biomes are in various states of degradation. The injudicious stocking of overly high numbers of domestic livestock is considered to be the anthropogenic cause of this degradation. The palatable plants of these rangelands have been greatly reduced in number or extirpated from some areas. In order to return palatable plants to degraded rangelands and improve rangeland productivity, many restoration projects have been attempted that involve reseeding. The sowing of seeds into degraded rangelands, or other disturbed areas, has often provided disappointing germination results. This study will attempt to determine what some of the main aspects are that affect Karoo seed germination, both positively and negatively. The specific objectives of the study are to determine the causes of pre-sowing seed mortality, the effect of drying on seed germination, the effect of planting depth on seed germination and the effect of storage time on seed germination. The seeds of four palatable Karoo plant species harvested at the Worcester Veld Reserve were selected to be subjected to germination trails and viability testing. This study uses germination trials under controlled light and temperature conditions, as well as 2, 3, 5-triphenyl tetrazolium chloride tests to determine whether the four species of Karoo seeds harvested at the Worcester Veld Reserve for rangeland reseeding projects are viable and germinable. The practice of drying seeds after harvesting is tested to determine the effect of drying on seed germination. The germination of seed was also tested over 17 intervals of 3 weeks to determine the effect of storage time on seed germinability. Germination trials were also conducted in a nursery to determine whether there was a difference in seedling emergence between seeds planted at 10 mm depth compared to seeds planted on the surface with a partial covering of sand. The seed viability of all four species studied was found to be below 50%. Drying only significantly improved the germination of Osteospermum sinuatum seeds. The seeds of O. sinuatum and Eriocephalus africanus germinated reasonably well throughout the 17 time intervals, while the seeds of Chaetobromus involucratus and Gorteria integrifolia germinated poorly during the first six months after harvesting, after which v germination improved markedly. Seedling emergence of all four species studied was significantly higher when planted at the substrate surface, compared to seeds planted at 10 mm depth. The findings of this study show that while the viability of the seeds harvested for rangeland reseeding projects are quite low, the appropriate pre-treatment, seed age and planting depth will allow a significant increase in germination. This increase in germination should provide a greater chance of establishing palatable plants in rangeland reseeding projects.
  • Full Text:
  • Date Issued: 2019

Identifying methane emissions with isotopic and hydrochemical clues to their origin across selected areas of the Karoo Basin, South Africa

  • Authors: Campbell, Richard Duncombe
  • Date: 2019
  • Subjects: Methane -- Environmental aspects -- South Africa , Atmospheric methane -- Environmental aspects -- South Africa , Groundwater -- Research
  • Language: English
  • Type: Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10948/42218 , vital:36636
  • Description: Currently, only sparse data exists on the methane emissions from the Main Karoo Basin, South Africa, where the potential discovery of vast quantities of unconventional natural gas from the black shales of the Whitehill Formation has sparked great interest in the prospect of hydraulic fracturing. In this study, a new infield methane quantification instrument (Picarro G2201-i) is used to identify freely emitted methane and more importantly collect stable carbon isotope ratios (δ13C-(CH4)g) that is used in obtaining information regarding the genetic origin and thermal maturity of the methane. Hydrochemical information (TOC, δ13C-TOC, 3H, δ18O, δ2H, and anions) were also scrutinised to assist in the determination of the origin of methane across the Karoo Basin. Twenty-one sites were investigated across four provinces in the Main Karoo Basin. Six of these sites are thermal springs, three are shallow boreholes (<100 m in depth), and twelve were Soekor (The Southern Oil Exploration Corporation)/deep boreholes (>1500 m). Of these 21 sites, 17 were suitable for either methane analysis or groundwater sampling, with four of the Soekor boreholes unsuitable. The presence of methane in groundwater and being freely emitted seems to be a common occurrence above the Main Karoo basin and of the 17 sites investigated, 14 had freely emitted methane emission. All but one of these sites had δ13C-(CH4)g signatures greater than -50 ‰, indicating a thermogenic origin. Combining the results obtained from the Picarro instrument with those compiled by Talma & Esterhuyse (2015), a higher resolution distribution map was created. The δ13C-CH4 signatures show patterning with a decreasing trend from the southern Karoo Basin to the north, which corresponds to the general decrease in thermal maturity of the Ecca shales (Whitehill Formation) northward across the Karoo Basin. The δ13C-(CH4)d results from a case study conducted by Eymold et al. (2018) differ significantly with the data collected in this study that included several of the same sampling locations. This is explained by a two phase partitioning (gas + water) that leads to the thermogenic endmember of methane being released in its free state (analysed by Picarro G2201-i) and microbial methane that is formed in situ remains dissolved in the water (analysed by Eymold et al. 2018). Soekor and deep sites; SA 1/66, KA 1/66, and KWV-1 that have direct pathways for methane migration from the Whitehill are deemed the best proxies to resolve the thermogenic endmember of methane, with δ13C-(CH4)g signatures of -26.32‰, 31.66‰, and -34.57‰, respectively. The hydrochemistry results suggests that that free methane emissions do not necessarily have to be associated with saline Cl- waters, as multiple sites have CH4 emissions with low salinities (Cl < 50 mg/L) and that methane in its free state can migrate to the surface due to buoyancy. The results also indicate that dolerite intrusions act as conduits for upward migration of groundwater from depth, but that the deep groundwater signatures proposed by Murray et al., (2015) are related to their different migration pathways and water-rock interactions rather than being representative of the deep formation waters. Using an initial assessment δ13C-CH4, TOC concentration [TOC] and the tritium (3H) values, where water samples that have 3H ≤ 1 TU, detectable TOC and δ13C-CH4 signatures > -50‰ could indicate hydraulic connectivity between the shallow aquifer and an organic/CH4 rich sedimentary layer, which may or may not be from the Whitehill Formation. However, this method for determining aquifer connectivity requires further investigations in the Karoo Basin context. The results obtained in this study add to the limited isotopic data of methane across the Karoo Basin and demonstrates the effectiveness of an infield identification of methane emissions using the Picarro G2201-i.
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  • Date Issued: 2019

Inshore benthic communities of the Port Elizabeth abalone ranching concession area

  • Authors: Moriarty, Lauren Alethea
  • Date: 2019
  • Subjects: Aquaculture , Abalone industry -- South Africa -- Port Elizabeth , Abalone culture -- South Africa -- Port Elizabeth , Abalone populations -- South Africa -- Port Elizabeth , Poaching -- South Africa -- Port Elizabeth
  • Language: English
  • Type: Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10948/41975 , vital:36614
  • Description: Abalone poaching in the Eastern Cape leading to resource depletion has resulted in the suspension of any commercial or recreational exploitation of abalone in the area. Abalone ranching trial projects have been initiated to help improve the natural stocks and potentially provide commercial yields. While seeding started in deeper water (5 – 10 m), improved abalone growth performance has been found in the shallower areas. This has resulted in the seeding effort being moved to these shallower sites (< 5m). An ecological survey of the baseline conditions of these shallow benthic areas is a requirement of the abalone ranching permit conditions (Permit No.: 1503759), aimed at detecting any impact that seeding may have on the benthic community. In addition to providing benchmark data for monitoring, the shallow benthic community (< 6m) in the Port Elizabeth ranching concession area has not been well described in terms of the requirements for abalone ranching. Information on the benthic communities in this area is limited to research on the substrate types and communities in deeper water (> 5m). This study aimed to address this information gap. Dive surveys were conducted along 10 m long transects (~3 reps) at three depth zones (<1m; 1-2m; > 2m) for four sites along the span of the ranching concession area. Similar assessments were done at a seeded site at the Noordhoek Ski Boat Club and an unseeded site at the Willows area, in order to reveal whether seeding had any impact on the benthic community. Images from a GoPro mounted in the centre of a framer unit (0.5 m2) were taken every 0.5 m along the transect. Macroalgal and macrofaunal cover was determined from these images, and the benthic community characterised from these data. Seaweed samples were taken for species identification. In the four baseline sites, sampling was done at three depth zones to note any changes with a depth gradient, both in terms of substrate type, as well as community composition. There was a notable trend with substrate type having a significant influence (P<0.05) on the community structure. Seaweed communities were dominated by Plocamium corallorhiza and coralline turf based on substrate types. There was also a significant relationship (P<0.05) between substrate type, dominant seaweed species and abalone presence. A Canonical Correspondence Analysis (CCA) of the community data suggested that the benthic community does not change significantly along the distance of coastline sampled. A hierarchical cluster analysis of Bray-Curtis dissimilarity for transect data also suggested that the four sites do not represent ecologically dissimilar communities. A similar analysis showed that abalone seeding had to date not altered the benthic community in shallow seeded areas from the community described for shallow unseeded areas. The study was used to describe the baseline benthic community in areas west of Cape Recife, examine the natural variability along the coast, and determine whether there are relationships between the benthic community composition and emergent abalone abundance. This information will be useful in selection of habitats for abalone seeding in the future. It is important that monitoring and surveying of the study area are to be continued in so allowing for long term data collection which will help in making informed decisions as well as documenting the impact in seeded areas when compared to unseeded areas.
  • Full Text:
  • Date Issued: 2019

Involving fishermen in seabirds’ conservation: bridging the gap between socio-economic needs of industry and the needs of seabirds

  • Authors: Ginsburg, Tayla
  • Date: 2019
  • Subjects: Sea birds -- Ecology , Island ecology Island animals -- Conservation
  • Language: English
  • Type: Thesis , Masters , MSc
  • Identifier: http://hdl.handle.net/10948/42184 , vital:36633
  • Description: Marine ecosystems and species face multiple threats, particularly intensive industrial-scale fishing activities. As the human population continues to increase exponentially and drive a greater demand for food, commercial fishing effort will likely intensify. While terrestrial protected areas are well developed, marine protected areas (MPAs) are less so, both in the area covered and management practices. There is currently a drive to increase the extent of MPAs, both globally and in South Africa, particularly for those ecosystems and marine species that can benefit from area-based management. The size, shape, location zonation of MPAs generally remain static through time. However, the ocean is a dynamic environment and static MPAs are not always able to achieve conservation objectives for their component ecosystems and species. Dynamic Ocean Management (DOM) is an approach that integrates near real-time data on biological, oceanographic, social and/or economic variables to adjust an MPAs boundary and zonation in both space and time. The aim of this thesis was to assess the viability of applying DOM to a fishing exclusion zone within a zoned MPA in Algoa Bay, South Africa, to support conservation objectives for the Endangered African penguin Spheniscus demersus. Algoa Bay supports half of the world’s remaining population of this species. First, the degree of spatial overlap between foraging penguins and purse-seine fishers in Algoa Bay was determined over five years. In all years, purse-seiner fishing vessels were located around or near to St Croix Island and a large proportion of the total pelagic fish catch from the Bay was removed from this area. Breeding penguins travelled significantly further while foraging when the overlap (and subsequent competition for pelagic fish) was higher, suggesting that African penguins would benefit from a fishing exclusion zone around St Croix Island owing to reduced competition. However, an exclusion zone can have socio-economic impacts on fisheries as a result of the lost fishing area. A common concern raised by fishers is the direct loss of income, either as a result of increased fuel costs to reach alternate fishing grounds or decreased catch. An analysis of catch and travel time (as a proxy for fuel costs) when a 20 km exclusion zone was present or absent around St Croix Island revealed that the exclusion zone scenarios had no significant impact on either variable. Interviews with individuals in the local purse-seine fishery (both fishers and factory managers) showed a consensus that the marine environment needs protection and that MPAs have various environmental benefits. Despite this, individuals were concerned about how they would be impacted by the exclusion zone in the MPA. The interviews highlighted the willingness of individuals in the purse-seine fishery to talk to and work with scientists.
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  • Date Issued: 2019
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