Leopard population density, home range size and movement patterns in a mixed landuse area of the Mangwe District of Zimbabwe
- Authors: Grant, Tanith-Leigh
- Date: 2012
- Subjects: Leopard -- Monitoring -- Zimbabwe , Leopard -- Conservation -- Zimbabwe , Wildlife monitoring -- Zimbabwe , Wildlife conservation -- Zimbabwe
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5726 , http://hdl.handle.net/10962/d1005412 , Leopard -- Monitoring -- Zimbabwe , Leopard -- Conservation -- Zimbabwe , Wildlife monitoring -- Zimbabwe , Wildlife conservation -- Zimbabwe
- Description: Trophy hunting is often employed as a conservation management tool for large predators. However, in order for this method to succeed, hunting levels must be sustainable. Very little robust population data exist for African leopards (Panthera pardus) in general, and almost no density or spatial ecology data exist for leopards in Zimbabwe. Zimbabwe has one of the highest annual CITES leopard trophy hunting quotas in Africa, the sustainability of which has not been assessed, despite large scale landuse changes over the last 12 years. The focal area of this study was within the Mangwe district, in the south-west of Zimbabwe. The region is dominated by cattle and wildlife ranches, with high levels of leopard hunting, making it an important area for assessing leopard population density and spatial ecology. Three population density estimation methods were employed in my study: a spoor index survey, an unbaited camera-trapping survey and a baited camera-trapping survey. Using three calibration equations, spoor indices appeared to underestimate the leopard population (1.28-3.29 leopards/ 100 km²) as the equations were calibrated for areas with different habitats and leopard densities. In addition, the unbaited camera survey only produced six leopard photographs, unsuitable for individual identification and analysis. By contrast, the baited camera survey produced 292 identifiable leopard photographs, from which 13 individuals were identified. Density estimates calculated using the programme CAPTURE and the M[subscript]h model with the Mean Maximum Distance Moved Outside of Study Area (MMDMOSA) buffer method (4.79±0.83 leopards/100 km²), and the programme SPACECAP, using a buffer of 2.5 km (5.12±0.62 leopards/100 km²), appeared to generate the most reliable leopard population estimates. To assess the spatial ecology, three leopards (one male, two females) were captured and fitted with GPS collars. The home range estimates of the three leopards (95% Kernel UD: male 263 km², females 31 and 45 km²) were smaller than those of leopards in more arid regions, but larger than those of mesic habitats. This suggests that the Mangwe area has a higher quality habitat than the arid regions of Namibia, but less suitable habitat than protected bushveld areas (e.g. Kruger National Park, South Africa). My data represents the first robust leopard density and home range assessment for Zimbabwe. In addition, my results indicate that the current hunting quota issued to the Mangwe area is unsustainable. Consequently, I recommend revising the quota to five leopards for the entire area, and halving the current national leopard quota to 250, until a national leopard census is completed.
- Full Text:
- Date Issued: 2012
- Authors: Grant, Tanith-Leigh
- Date: 2012
- Subjects: Leopard -- Monitoring -- Zimbabwe , Leopard -- Conservation -- Zimbabwe , Wildlife monitoring -- Zimbabwe , Wildlife conservation -- Zimbabwe
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5726 , http://hdl.handle.net/10962/d1005412 , Leopard -- Monitoring -- Zimbabwe , Leopard -- Conservation -- Zimbabwe , Wildlife monitoring -- Zimbabwe , Wildlife conservation -- Zimbabwe
- Description: Trophy hunting is often employed as a conservation management tool for large predators. However, in order for this method to succeed, hunting levels must be sustainable. Very little robust population data exist for African leopards (Panthera pardus) in general, and almost no density or spatial ecology data exist for leopards in Zimbabwe. Zimbabwe has one of the highest annual CITES leopard trophy hunting quotas in Africa, the sustainability of which has not been assessed, despite large scale landuse changes over the last 12 years. The focal area of this study was within the Mangwe district, in the south-west of Zimbabwe. The region is dominated by cattle and wildlife ranches, with high levels of leopard hunting, making it an important area for assessing leopard population density and spatial ecology. Three population density estimation methods were employed in my study: a spoor index survey, an unbaited camera-trapping survey and a baited camera-trapping survey. Using three calibration equations, spoor indices appeared to underestimate the leopard population (1.28-3.29 leopards/ 100 km²) as the equations were calibrated for areas with different habitats and leopard densities. In addition, the unbaited camera survey only produced six leopard photographs, unsuitable for individual identification and analysis. By contrast, the baited camera survey produced 292 identifiable leopard photographs, from which 13 individuals were identified. Density estimates calculated using the programme CAPTURE and the M[subscript]h model with the Mean Maximum Distance Moved Outside of Study Area (MMDMOSA) buffer method (4.79±0.83 leopards/100 km²), and the programme SPACECAP, using a buffer of 2.5 km (5.12±0.62 leopards/100 km²), appeared to generate the most reliable leopard population estimates. To assess the spatial ecology, three leopards (one male, two females) were captured and fitted with GPS collars. The home range estimates of the three leopards (95% Kernel UD: male 263 km², females 31 and 45 km²) were smaller than those of leopards in more arid regions, but larger than those of mesic habitats. This suggests that the Mangwe area has a higher quality habitat than the arid regions of Namibia, but less suitable habitat than protected bushveld areas (e.g. Kruger National Park, South Africa). My data represents the first robust leopard density and home range assessment for Zimbabwe. In addition, my results indicate that the current hunting quota issued to the Mangwe area is unsustainable. Consequently, I recommend revising the quota to five leopards for the entire area, and halving the current national leopard quota to 250, until a national leopard census is completed.
- Full Text:
- Date Issued: 2012
Quantification of the cross-sectoral impacts of waterweeds and their control in Ghana
- Authors: Akpabey, Felix Jerry
- Date: 2012
- Subjects: Water hyacinth -- Control -- Environmental aspects -- Ghana Alien plants -- Research -- Ghana Introduced organisms Economic development -- Social aspects -- Research -- Ghana
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5748 , http://hdl.handle.net/10962/d1005435
- Description: The Akosombo Dam on the Volta River in Ghana was built in 1963 to provide cheap energy to fuel industry and to accelerate the economic growth of the country. It provides hydroelectric power, enhanced fishing and water transportation upstream, and improved opportunities for irrigated farming, especially in the lower reaches, and their attendant economic multiplier effects. A few years after the construction of this major dam, a rapid expansion of industrialization took place in Ghana. This brought about an exponential increase in demand for more electrical power. This led to the construction of a smaller dam at Akuse, downstream of the Akosomho Dam in 1981 and the formation of a headpond at Kpong. The impoundment of the river at the two sites (Akosombo and Kpong) caused an alteration in the existing ecological and biophysical processes in the river basin, including a slowing of the flow of the river, upstream and downstream. Changes in the natural processes, such as a reduction in the flow of the river and an increase in nutrient status of the water, resulted in an invasion of aquatic weeds, increasing the density of aquatic snails (intermediate hosts of schistosomiasis), silting and closure of the estuary, as well as other more subtle effects. The invasion of the river's main course and the dams by aquatic plants led to a corresponding reduction of navigable water both upstream and downstream. The aim of this thesis was to quantify the impact and control of waterweeds, especially water hyacinth, Eichhornia crassipes (Mart) Solms-Laubach (Pontederiaceae), in Ghana. A floral survey on the Kpong Headpond recorded 49 emergent, 12 free floating and I submerged aquatic plant species, many of which were indigenous, but the exotic or introduced water hyacinth was recorded at most of the sampling sites, and was the most abundant and had the biggest impact on the utilization of the water resource. Mats of water hyacinth served as substrates for other, indigenous species to grow out into the main channel of the headpond, including the intake point of the Kpong head works of the Ghana Water Company Limited (GWCL) and landing sites for boats. These mats resulted in a reduction of the fish (fin and shell) harvest, reducing the annual production to far below demand. Water hyacinth was also shown to have severe health implications. A survey of the Ministry of Health records showed that the prevalence of both urinary and intestinal schistosomiasis had risen significantly over time as the abundance of waterweeds, most notably water hyacinth, increased, and ranged between 70% and 75% but up to 100% in some lakeside communities. Based on the work done by an NGO on board the medical boat ("Onipa Nua "), losses in terms of money due to the effect on health of the aquatic weed infestations on the Volta River in 2006 amounted to US$ 620,000. Economic losses due to invasive alien aquatic weeds were also calculated on the Oti River Arm of Lake Volta. It was estimated that about US$2.3 million per annum would be lost to the Volta Lake Transport Company and individual boat transport operators if this section of the river were 100% covered by aquatic weeds (water hyacinth and Salvinia molesta D.S. Mitchell (Salviniaceae)). It was also estimated that US$327,038 was spent annually in monitoring and managing the weeds in the Oti River. Control interventions for aquatic weeds have been implemented in river systems in Ghana. The biological control agents Neochetina bruchi Hustache (Coleoptera, Curculionidae) and Neochetina eichhorniae Warner (Coleoptera, Curculionidae) have been used on water hyacinth infestations in the Oti River Arm of Lake Volta, the Tano River and the Lagoon complex in the south-western part of the country. Cyrtobagous salviniae Calder and Sands (Coleoptera: Curculionidae) has been used to control salvinia, and Neohydronomous affinis Hustache (Coleoptera: Curculionidae) to control water lettuce, Pistia stratiotes Lilmaeus (Araceae) in the Tano River and Lagoon complex. Although these projects have been regarded as successful, they have relied on research from elsewhere in the world and no postrelease quantification has been conducted. In evaluating the impact of the biological control agents Neochetina bruchi and Neochetina eichhorniae weevils on water hyacinth infestations in the Tano River, fresh adult feeding scars were recorded as well as the numbers of adult weevils on each water hyacinth plant sampled at six sites. Despite being released in 1994, weevil numbers and resultant damage to plants in the Tano Lagoon was low in comparison to other regions of the world where these agents have been used. The main reason for this is that this lagoon floods seasonally, washing weevil-infested plants out to sea. Water hyacinth then re-infests the lagoon from seed and the weevil populations are low. To resolve this situation, two courses of action are proposed. The first is to mass rear the weevils along the shore of the lagoon and release them when the first seedlings recruit. The second proposal is that additional agents that have shorter lifecycies and are more mobile than the weevils should be released. To this end, the water hyacinth mirid, Eccritotarsus catarinensis (Carvalho) (Hemiptera: Miridae) was imported from South Africa and released onto the Tano Lagoon in 2009. Retrospective laboratory host specificity trials were conducted on Neachetina eichharniae and Neachetina bruchi weevils 15 years after their release into Ghana to see if any variation in their host ranges had occurred. Considerable damage was inflicted on the E. crassipes leaves by the Neachetina weevils, while little feeding damage was recorded on both Heteranthera callifalia Kunth. (Pontederiaceae) and Eichharnia natans (P.Beauv.) Solms (Pontederiaceae). All the weevils introduced on H callifalia and E. natans died after the first week. This study served to confirm the host specificity and thereby the safety of these agents. Invasive alien aquatic macrophytes have negative impacts on the environment and economy of Ghana. The control of these weeds is essential to socioeconomic development and improved human health standards in riparian communities. Biological control offers a safe and sustainable control option, but requires diligent implementation. However, aquatic weed invasion is more typically a result of the anthropogenically induced eutrophication of water bodies, and this is the main issue that has to be addressed.
- Full Text:
- Date Issued: 2012
- Authors: Akpabey, Felix Jerry
- Date: 2012
- Subjects: Water hyacinth -- Control -- Environmental aspects -- Ghana Alien plants -- Research -- Ghana Introduced organisms Economic development -- Social aspects -- Research -- Ghana
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5748 , http://hdl.handle.net/10962/d1005435
- Description: The Akosombo Dam on the Volta River in Ghana was built in 1963 to provide cheap energy to fuel industry and to accelerate the economic growth of the country. It provides hydroelectric power, enhanced fishing and water transportation upstream, and improved opportunities for irrigated farming, especially in the lower reaches, and their attendant economic multiplier effects. A few years after the construction of this major dam, a rapid expansion of industrialization took place in Ghana. This brought about an exponential increase in demand for more electrical power. This led to the construction of a smaller dam at Akuse, downstream of the Akosomho Dam in 1981 and the formation of a headpond at Kpong. The impoundment of the river at the two sites (Akosombo and Kpong) caused an alteration in the existing ecological and biophysical processes in the river basin, including a slowing of the flow of the river, upstream and downstream. Changes in the natural processes, such as a reduction in the flow of the river and an increase in nutrient status of the water, resulted in an invasion of aquatic weeds, increasing the density of aquatic snails (intermediate hosts of schistosomiasis), silting and closure of the estuary, as well as other more subtle effects. The invasion of the river's main course and the dams by aquatic plants led to a corresponding reduction of navigable water both upstream and downstream. The aim of this thesis was to quantify the impact and control of waterweeds, especially water hyacinth, Eichhornia crassipes (Mart) Solms-Laubach (Pontederiaceae), in Ghana. A floral survey on the Kpong Headpond recorded 49 emergent, 12 free floating and I submerged aquatic plant species, many of which were indigenous, but the exotic or introduced water hyacinth was recorded at most of the sampling sites, and was the most abundant and had the biggest impact on the utilization of the water resource. Mats of water hyacinth served as substrates for other, indigenous species to grow out into the main channel of the headpond, including the intake point of the Kpong head works of the Ghana Water Company Limited (GWCL) and landing sites for boats. These mats resulted in a reduction of the fish (fin and shell) harvest, reducing the annual production to far below demand. Water hyacinth was also shown to have severe health implications. A survey of the Ministry of Health records showed that the prevalence of both urinary and intestinal schistosomiasis had risen significantly over time as the abundance of waterweeds, most notably water hyacinth, increased, and ranged between 70% and 75% but up to 100% in some lakeside communities. Based on the work done by an NGO on board the medical boat ("Onipa Nua "), losses in terms of money due to the effect on health of the aquatic weed infestations on the Volta River in 2006 amounted to US$ 620,000. Economic losses due to invasive alien aquatic weeds were also calculated on the Oti River Arm of Lake Volta. It was estimated that about US$2.3 million per annum would be lost to the Volta Lake Transport Company and individual boat transport operators if this section of the river were 100% covered by aquatic weeds (water hyacinth and Salvinia molesta D.S. Mitchell (Salviniaceae)). It was also estimated that US$327,038 was spent annually in monitoring and managing the weeds in the Oti River. Control interventions for aquatic weeds have been implemented in river systems in Ghana. The biological control agents Neochetina bruchi Hustache (Coleoptera, Curculionidae) and Neochetina eichhorniae Warner (Coleoptera, Curculionidae) have been used on water hyacinth infestations in the Oti River Arm of Lake Volta, the Tano River and the Lagoon complex in the south-western part of the country. Cyrtobagous salviniae Calder and Sands (Coleoptera: Curculionidae) has been used to control salvinia, and Neohydronomous affinis Hustache (Coleoptera: Curculionidae) to control water lettuce, Pistia stratiotes Lilmaeus (Araceae) in the Tano River and Lagoon complex. Although these projects have been regarded as successful, they have relied on research from elsewhere in the world and no postrelease quantification has been conducted. In evaluating the impact of the biological control agents Neochetina bruchi and Neochetina eichhorniae weevils on water hyacinth infestations in the Tano River, fresh adult feeding scars were recorded as well as the numbers of adult weevils on each water hyacinth plant sampled at six sites. Despite being released in 1994, weevil numbers and resultant damage to plants in the Tano Lagoon was low in comparison to other regions of the world where these agents have been used. The main reason for this is that this lagoon floods seasonally, washing weevil-infested plants out to sea. Water hyacinth then re-infests the lagoon from seed and the weevil populations are low. To resolve this situation, two courses of action are proposed. The first is to mass rear the weevils along the shore of the lagoon and release them when the first seedlings recruit. The second proposal is that additional agents that have shorter lifecycies and are more mobile than the weevils should be released. To this end, the water hyacinth mirid, Eccritotarsus catarinensis (Carvalho) (Hemiptera: Miridae) was imported from South Africa and released onto the Tano Lagoon in 2009. Retrospective laboratory host specificity trials were conducted on Neachetina eichharniae and Neachetina bruchi weevils 15 years after their release into Ghana to see if any variation in their host ranges had occurred. Considerable damage was inflicted on the E. crassipes leaves by the Neachetina weevils, while little feeding damage was recorded on both Heteranthera callifalia Kunth. (Pontederiaceae) and Eichharnia natans (P.Beauv.) Solms (Pontederiaceae). All the weevils introduced on H callifalia and E. natans died after the first week. This study served to confirm the host specificity and thereby the safety of these agents. Invasive alien aquatic macrophytes have negative impacts on the environment and economy of Ghana. The control of these weeds is essential to socioeconomic development and improved human health standards in riparian communities. Biological control offers a safe and sustainable control option, but requires diligent implementation. However, aquatic weed invasion is more typically a result of the anthropogenically induced eutrophication of water bodies, and this is the main issue that has to be addressed.
- Full Text:
- Date Issued: 2012
Small mammal communities at high altitude within the Sneeuberg Mountain complex, Eastern Cape Province, South Africa
- Authors: Kok, Armand du Preez
- Date: 2012
- Subjects: Mountain animals -- Research -- South Africa -- Eastern Cape , Mammal populations -- Research -- South Africa -- Eastern Cape , Mammals -- Research -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5766 , http://hdl.handle.net/10962/d1005454 , Mountain animals -- Research -- South Africa -- Eastern Cape , Mammal populations -- Research -- South Africa -- Eastern Cape , Mammals -- Research -- South Africa -- Eastern Cape
- Description: Due to their widespread and specious nature, small mammals are ideal for biogeographical studies. Small mammals also effectively connect various trophic levels by being both consumers and prey items for other animals. The Great Escarpment is the dominant mountain landscape in South Africa. Yet, very little small mammal research has been conducted on the Great Escarpment outside of the Main Drakensberg Mountains. This is surprising given the importance of mountains in shaping regional ecology. In this study, I assessed the diversity and community composition of small mammals at three high altitude (>1700m) sites within the Sneeuberg Mountain Complex (SMC) from June 2009 to May 2010. I also tested the effectiveness of five different bait types for measuring small mammal diversity (i.e. number of individuals caught, species richness, Shannon diversity index and Simpson index of diversity). Out of a total of 423 captures, 292 individuals of 12 small mammal species (one shrew, one elephant shrew and 10 rodents) were recorded over 5280 trap nights. The species richness and diversity of small mammals captured at the three sites were similar and this homogeneity was probably related to the regional processes (e.g. climate and latitude) that govern species richness and diversity. The most effective bait type in terms of capture success, species richness and diversity measurements was peanut butter and oats. In addition, the use of richness estimators revealed that peanut butter and oats was the most effective bait for sampling the species richness of small mammals. The effectiveness of peanut butter and oats was related to this bait having a more attractive scent, when compared to the other bait types. Future studies should focus on researching the range of local and regional processes that drive small mammal diversity at high altitudes in South Africa. I also recommend the use of more than one bait type when planning to survey small mammal communities.
- Full Text:
- Date Issued: 2012
- Authors: Kok, Armand du Preez
- Date: 2012
- Subjects: Mountain animals -- Research -- South Africa -- Eastern Cape , Mammal populations -- Research -- South Africa -- Eastern Cape , Mammals -- Research -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5766 , http://hdl.handle.net/10962/d1005454 , Mountain animals -- Research -- South Africa -- Eastern Cape , Mammal populations -- Research -- South Africa -- Eastern Cape , Mammals -- Research -- South Africa -- Eastern Cape
- Description: Due to their widespread and specious nature, small mammals are ideal for biogeographical studies. Small mammals also effectively connect various trophic levels by being both consumers and prey items for other animals. The Great Escarpment is the dominant mountain landscape in South Africa. Yet, very little small mammal research has been conducted on the Great Escarpment outside of the Main Drakensberg Mountains. This is surprising given the importance of mountains in shaping regional ecology. In this study, I assessed the diversity and community composition of small mammals at three high altitude (>1700m) sites within the Sneeuberg Mountain Complex (SMC) from June 2009 to May 2010. I also tested the effectiveness of five different bait types for measuring small mammal diversity (i.e. number of individuals caught, species richness, Shannon diversity index and Simpson index of diversity). Out of a total of 423 captures, 292 individuals of 12 small mammal species (one shrew, one elephant shrew and 10 rodents) were recorded over 5280 trap nights. The species richness and diversity of small mammals captured at the three sites were similar and this homogeneity was probably related to the regional processes (e.g. climate and latitude) that govern species richness and diversity. The most effective bait type in terms of capture success, species richness and diversity measurements was peanut butter and oats. In addition, the use of richness estimators revealed that peanut butter and oats was the most effective bait for sampling the species richness of small mammals. The effectiveness of peanut butter and oats was related to this bait having a more attractive scent, when compared to the other bait types. Future studies should focus on researching the range of local and regional processes that drive small mammal diversity at high altitudes in South Africa. I also recommend the use of more than one bait type when planning to survey small mammal communities.
- Full Text:
- Date Issued: 2012
Studies on existing and new isolates of Cryptophlebia leucotreta granulovirus (CrleGV) on Thaumatotibia leucotreta populations from a range of geographic regions in South Africa
- Authors: Opoku-Debrah, John Kwadwo
- Date: 2012
- Subjects: Cryptophlebia leucotreta Cryptophlebia leucotreta -- South Africa Cryptophlebia leucotreta -- Biological control Cryptophlebia leucotreta -- Life cycles Baculoviruses Lepidoptera -- Biological control Tortricidae -- Biological control Microbial insecticides Pests -- Integrated control
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5778 , http://hdl.handle.net/10962/d1005466
- Description: Baculoviruses are arthropod-specific DNA viruses that are highly virulent to most lepidopteran insects. Their host specificity and compatibility with IPM programmes has enabled their usage as safe microbial insecticides (biopesticides). Two baculovirus-based biopesticides, Cryptogran and Cryptex, which have been formulated with Cryptophlebia leucotreta granulovirus (CrleGV) have been registered for the control of false codling moth (FCM), Thaumatotibia (=Cryptophlebia) leucotreta (Meyrick) (Lepidoptera: Tortricidae) in South Africa and have been successfully incorporated into IPM programmes. However, several studies have indicated that insects can develop resistance to baculovirus-based biopesticide as was shown with field populations of codling moth (CM), Cydia pomonella (L.), which developed resistance to the biopesticide Cydia pomonella granulovirus (CpGV-M) in Europe. Other studies have shown that, under laboratory conditions, FCM populations differ in their susceptibility to Cryptogran and Cryptex. In order to investigate difference in susceptibility as well as protect against any future resistance by FCM to Cryptogran and Cryptex, a search for novel CrleGV-SA isolates from diseased insects from different geographic regions in South Africa was performed. Six geographic populations (Addo, Citrusdal, Marble Hall, Nelspruit, Baths and Mixed colonies) of FCM were established and maintained in the laboratory. Studies on the comparative biological performance based on pupal mass, female fecundity, egg hatch, pupal survival, adult eclosion and duration of life cycle of the Addo, Citrusdal, Marble Hall, Nelspruit and Mixed colonies revealed a low biological performance for the Citrusdal colony. This was attributed to the fact that FCM populations found in the Citrusdal area are not indigenous and may have been introduced from a very limited gene pool from another region. When insects from five colonies, excluding the Baths colony, were subjected to stress by overcrowding , a latent baculovirus resident in the Addo, Nelspruit, Citrusdal, Marble Hall and Mixed colonies was brought into an overt lethal state. Transmission electron micrographs revealed the presence of GV occlusion bodies (OBs) in diseased insects. DNA profiles obtained by single restriction endonuclease analysis of viral genomic DNA using BamH 1, Sa/1, Xba1 , Pst1, Xh01 , Kpn1, Hindlll and EcoR1 revealed five CrleGV-SA isolates latent within the insect populations. The new isolates were named CrleGV-SA Ado, CrleGV-SA Cit, CrleGV-SA Mbl, CrleGVSA Nels and CrleGV-SA Mix isolates. The novelty of the five CrleGV-SA isolates was confirmed by the presence of unique submolar bands, indicating that each isolate was genetically different. PCR amplification and sequencing of the granulin and egt genes from the five isolates revealed several single nucleotide polymorph isms (SNPs) which, in some cases, resulted in amino acid substitutions. DNA profiles from RFLPs, as well as phylogenetic analysis based on granulin and egt sequencing showed the presence of two CrleGV-SA genome types for the CrleGV-SA isolate. Cryptex and CrleGV-SA Ado, CrleGV-SA Cit, CrleGV-SA Mbl and CrleGV-SA Mix were placed as members of Group one CrleGV-SA, and Cryptogran and CrleGV-SA Nels isolate were placed into Group two CrleGV-SA. In droplet feeding bioassays, the median survival time (STso) for neonate larvae inoculated with Group one and two CrleGV-SA were determined to range from 80 - 88 hours (3.33 - 3.67 days), for all five colonies. LDso values for Group one and two CrleGV-SA against neonates from the Addo, Citrusdal, Marble Hall, Nelspruit and Mixed colonies varied between some populations and ranged from 0.80 - 3.12 OBs per larva, indicating some level of variation in host susceptibility. This is the first study reporting the existence of genetically distinct CrleGV baculovirus isolates infecting FCM in different geographical areas of South Africa. The results of this study have broad-ranging implications for our understanding of baculovirus-host interactions and for the application of baculovirus basedbiopesticides.
- Full Text:
- Date Issued: 2012
- Authors: Opoku-Debrah, John Kwadwo
- Date: 2012
- Subjects: Cryptophlebia leucotreta Cryptophlebia leucotreta -- South Africa Cryptophlebia leucotreta -- Biological control Cryptophlebia leucotreta -- Life cycles Baculoviruses Lepidoptera -- Biological control Tortricidae -- Biological control Microbial insecticides Pests -- Integrated control
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5778 , http://hdl.handle.net/10962/d1005466
- Description: Baculoviruses are arthropod-specific DNA viruses that are highly virulent to most lepidopteran insects. Their host specificity and compatibility with IPM programmes has enabled their usage as safe microbial insecticides (biopesticides). Two baculovirus-based biopesticides, Cryptogran and Cryptex, which have been formulated with Cryptophlebia leucotreta granulovirus (CrleGV) have been registered for the control of false codling moth (FCM), Thaumatotibia (=Cryptophlebia) leucotreta (Meyrick) (Lepidoptera: Tortricidae) in South Africa and have been successfully incorporated into IPM programmes. However, several studies have indicated that insects can develop resistance to baculovirus-based biopesticide as was shown with field populations of codling moth (CM), Cydia pomonella (L.), which developed resistance to the biopesticide Cydia pomonella granulovirus (CpGV-M) in Europe. Other studies have shown that, under laboratory conditions, FCM populations differ in their susceptibility to Cryptogran and Cryptex. In order to investigate difference in susceptibility as well as protect against any future resistance by FCM to Cryptogran and Cryptex, a search for novel CrleGV-SA isolates from diseased insects from different geographic regions in South Africa was performed. Six geographic populations (Addo, Citrusdal, Marble Hall, Nelspruit, Baths and Mixed colonies) of FCM were established and maintained in the laboratory. Studies on the comparative biological performance based on pupal mass, female fecundity, egg hatch, pupal survival, adult eclosion and duration of life cycle of the Addo, Citrusdal, Marble Hall, Nelspruit and Mixed colonies revealed a low biological performance for the Citrusdal colony. This was attributed to the fact that FCM populations found in the Citrusdal area are not indigenous and may have been introduced from a very limited gene pool from another region. When insects from five colonies, excluding the Baths colony, were subjected to stress by overcrowding , a latent baculovirus resident in the Addo, Nelspruit, Citrusdal, Marble Hall and Mixed colonies was brought into an overt lethal state. Transmission electron micrographs revealed the presence of GV occlusion bodies (OBs) in diseased insects. DNA profiles obtained by single restriction endonuclease analysis of viral genomic DNA using BamH 1, Sa/1, Xba1 , Pst1, Xh01 , Kpn1, Hindlll and EcoR1 revealed five CrleGV-SA isolates latent within the insect populations. The new isolates were named CrleGV-SA Ado, CrleGV-SA Cit, CrleGV-SA Mbl, CrleGVSA Nels and CrleGV-SA Mix isolates. The novelty of the five CrleGV-SA isolates was confirmed by the presence of unique submolar bands, indicating that each isolate was genetically different. PCR amplification and sequencing of the granulin and egt genes from the five isolates revealed several single nucleotide polymorph isms (SNPs) which, in some cases, resulted in amino acid substitutions. DNA profiles from RFLPs, as well as phylogenetic analysis based on granulin and egt sequencing showed the presence of two CrleGV-SA genome types for the CrleGV-SA isolate. Cryptex and CrleGV-SA Ado, CrleGV-SA Cit, CrleGV-SA Mbl and CrleGV-SA Mix were placed as members of Group one CrleGV-SA, and Cryptogran and CrleGV-SA Nels isolate were placed into Group two CrleGV-SA. In droplet feeding bioassays, the median survival time (STso) for neonate larvae inoculated with Group one and two CrleGV-SA were determined to range from 80 - 88 hours (3.33 - 3.67 days), for all five colonies. LDso values for Group one and two CrleGV-SA against neonates from the Addo, Citrusdal, Marble Hall, Nelspruit and Mixed colonies varied between some populations and ranged from 0.80 - 3.12 OBs per larva, indicating some level of variation in host susceptibility. This is the first study reporting the existence of genetically distinct CrleGV baculovirus isolates infecting FCM in different geographical areas of South Africa. The results of this study have broad-ranging implications for our understanding of baculovirus-host interactions and for the application of baculovirus basedbiopesticides.
- Full Text:
- Date Issued: 2012
The diet and ecological role of black-backed jackals, Canis Mesomelas, in two conservation areas in the Eastern Cape Province, South Africa
- Authors: Brassine, Mathilde Chloé
- Date: 2012
- Subjects: Black-backed jackal -- South Africa -- Eastern Cape , Jackals -- South Africa -- Eastern Cape , Jackals -- Food , Wildlife conservation
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5660 , http://hdl.handle.net/10962/d1005344 , Black-backed jackal -- South Africa -- Eastern Cape , Jackals -- South Africa -- Eastern Cape , Jackals -- Food , Wildlife conservation
- Description: Mammalian predators are keystone species and can have disproportionately large impacts, relative to their abundance, on the communities and ecosystems they inhabit. In addition, predator-prey interactions (including bottom-up and top-down effects) are the fundamental linkage among species in food webs. Thus, understanding the food requirements of predators is imperative. There have been no comprehensive studies on the diet of black-backed jackals (Canis mesomelas) across a full seasonal cycle in the Albany Thicket Biome of the Eastern Cape Province. This biome is rich in plant diversity, is highly nutritious for herbivores and supports a large number of mammalian species, yet it is poorly conserved. The aim of the present study was to establish the diet of black-backed jackals on two conservation areas where thicket vegetation dominates (Great Fish River Reserve and Kwandwe Private Game Reserve). The diet was assessed using scats collected monthly from June 2009 to May 2010 and a sample of 25 stomachs over the same period. At both sites and across all seasons, mammalian hair was encountered most often (93% of all scats) and a total of 23 mammal species were consumed. Of the mammals recorded in the scats, hair from several ungulate species was encountered most frequently and these were mostly hider species (offspring hidden in tall vegetation just after birth). On a seasonal basis, the proportion of mammalian hair was lowest in autumn. However, the contribution of fruits (Carissa haematocarpa, Diospyros lycioides and Grewia robusta) to the diet was significantly higher during this season. This suggests that black-backed jackals may employ diet switching in the Eastern Cape as a mechanism to capitalise on seasonally abundant food sources. Based on the stomach content analysis, invertebrates were consumed as frequently as mammalian prey throughout the year but mammalian prey was recorded in greater quantity (i.e. volume and mass). Thus, scat analysis may have overestimated mammalian prey and fruits and underestimated the importance of invertebrates, particularly highly digestible species (e.g. termites). In spite of these differences, scat analysis demonstrated similar general and seasonal trends as the stomach content analysis. Thus, scat analysis can provide an efficient and relatively accurate source of information on the diet of blackbacked jackals in the Eastern Cape. Both stomach content and scat collection methods depicted the black-backed jackal as a generalist and opportunistic predator, mainly relying on mammals and invertebrates. Although the results of my study suggest that black-backed jackal may be important predators of certain ungulate species, further study on their prey preferences, actual biomass ingested and the effects on the population viability of prey species is required in order to develop a robust management plan for the species in the protected areas of the Eastern Cape.
- Full Text:
- Date Issued: 2012
- Authors: Brassine, Mathilde Chloé
- Date: 2012
- Subjects: Black-backed jackal -- South Africa -- Eastern Cape , Jackals -- South Africa -- Eastern Cape , Jackals -- Food , Wildlife conservation
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5660 , http://hdl.handle.net/10962/d1005344 , Black-backed jackal -- South Africa -- Eastern Cape , Jackals -- South Africa -- Eastern Cape , Jackals -- Food , Wildlife conservation
- Description: Mammalian predators are keystone species and can have disproportionately large impacts, relative to their abundance, on the communities and ecosystems they inhabit. In addition, predator-prey interactions (including bottom-up and top-down effects) are the fundamental linkage among species in food webs. Thus, understanding the food requirements of predators is imperative. There have been no comprehensive studies on the diet of black-backed jackals (Canis mesomelas) across a full seasonal cycle in the Albany Thicket Biome of the Eastern Cape Province. This biome is rich in plant diversity, is highly nutritious for herbivores and supports a large number of mammalian species, yet it is poorly conserved. The aim of the present study was to establish the diet of black-backed jackals on two conservation areas where thicket vegetation dominates (Great Fish River Reserve and Kwandwe Private Game Reserve). The diet was assessed using scats collected monthly from June 2009 to May 2010 and a sample of 25 stomachs over the same period. At both sites and across all seasons, mammalian hair was encountered most often (93% of all scats) and a total of 23 mammal species were consumed. Of the mammals recorded in the scats, hair from several ungulate species was encountered most frequently and these were mostly hider species (offspring hidden in tall vegetation just after birth). On a seasonal basis, the proportion of mammalian hair was lowest in autumn. However, the contribution of fruits (Carissa haematocarpa, Diospyros lycioides and Grewia robusta) to the diet was significantly higher during this season. This suggests that black-backed jackals may employ diet switching in the Eastern Cape as a mechanism to capitalise on seasonally abundant food sources. Based on the stomach content analysis, invertebrates were consumed as frequently as mammalian prey throughout the year but mammalian prey was recorded in greater quantity (i.e. volume and mass). Thus, scat analysis may have overestimated mammalian prey and fruits and underestimated the importance of invertebrates, particularly highly digestible species (e.g. termites). In spite of these differences, scat analysis demonstrated similar general and seasonal trends as the stomach content analysis. Thus, scat analysis can provide an efficient and relatively accurate source of information on the diet of blackbacked jackals in the Eastern Cape. Both stomach content and scat collection methods depicted the black-backed jackal as a generalist and opportunistic predator, mainly relying on mammals and invertebrates. Although the results of my study suggest that black-backed jackal may be important predators of certain ungulate species, further study on their prey preferences, actual biomass ingested and the effects on the population viability of prey species is required in order to develop a robust management plan for the species in the protected areas of the Eastern Cape.
- Full Text:
- Date Issued: 2012
The diet of black-backed jackal (Canis Mesomelas) on two contrasting land-use types in the Eastern Cape Province, South Africa and the validation of a new analytical method of mammalian hair identification
- Authors: Forbes, Ross William
- Date: 2012
- Subjects: Black-backed jackal -- South Africa -- Eastern Cape , Jackals -- South Africa -- Eastern Cape , Jackals -- Food , Mammals -- Identification
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5661 , http://hdl.handle.net/10962/d1005345 , Black-backed jackal -- South Africa -- Eastern Cape , Jackals -- South Africa -- Eastern Cape , Jackals -- Food , Mammals -- Identification
- Description: Diet assessments are critical for understanding the foraging behaviour, habitat use and trophic separation of mammalian predators and are vital for gaining insight into how predators influence prey populations. The aim of this research was to qualitatively describe the diet of black-backed jackals (Canis mesomelas, Schreber 1775) using scat analysis on two contrasting land-use types in the Eastern Cape Province, South Africa. Scats were collected on a monthly basis from November 2009 to October 2010 from two game reserves (Great Fish River Reserve and Shamwari Private Game Reserve) and two neighbouring livestock farms. The relative frequency of occurrence of mammal hair (33 – 47 %) and vegetation (32 – 45%)dominated jackal diet throughout the year across the four study sites. Other important prey items included invertebrates (8 – 21 %) and fruit and seeds (3 – 11 %). Birds and reptiles constituted ≤ 2 % of the diet and were only recorded on the game reserves. Significant seasonal dietary shifts were observed on the game reserves but not on the farms. Fruit and seeds were significantly more frequent in the diet during autumn at Great Fish River Reserve and invertebrates were significantly less common in the diet during winter on both reserves. In addition, vegetation was significantly more common in the diet during winter at Shamwari Private Game Reserve. The significant temporal variation of certain prey items is testament to black-backed jackals being opportunistic generalists, foraging on those food items which are most abundant, accessible and energetically beneficial. Land-use type also influenced the diet of black-backed jackals with significantly more invertebrates and, fruit and seeds being recorded on the game reserves than on the farms. By contrast, significantly more mammal hair and vegetation were present in the diet on the farms compared with the game reserves. The mammalian component of the diet was dominated by ruminants and rodents on the game reserves and by ruminants and livestock on the farms. The presence of livestock in the diet of black-backed jackals on the farms highlights their potential impact on the livestock industry in the region and may assist farmers in determining which predators are responsible for stock loss. Previous approaches for identifying mammalian hairs from predator scats have utilised dichotomous keys and reference collections but these are often time-consuming and require a trained individual to carry out the identification. Thus, I also tested the efficacy of an automated pattern recognition programme (HairSnap) for identifying mammalian hairs from black-backed jackal scats. The overall accuracy of the programme was 38 % with black-backed jackal, Greater kudu (Tragelaphus strepsiceros) and striped polecat (Ictonyx striatus) hairs being accurately identified more often (70 – 80 %) than any other species tested. It is likely that both the size and species composition of the sample resulted in the poor accuracy of the programme. However, with the implementation of several improvement measures (e.g. adjustment of the algorithm) the programme may offer a superior, bias-free method of mammalian hair identification. The dietary information gathered here furthers our knowledge of the biology of the blackbacked jackals, especially in the locally important thicket biome. Moreover, understanding their foraging habits allows for more effective management of the species on both game reserves and farmlands. I recommend that future research should focus on quantitatively assessing the diet of black-backed jackals in the Eastern Cape Province and elsewhere. This will compliment the dietary description provided in this study and may offer a biologically more meaningful indication of the relative importance of the prey items.
- Full Text:
- Date Issued: 2012
- Authors: Forbes, Ross William
- Date: 2012
- Subjects: Black-backed jackal -- South Africa -- Eastern Cape , Jackals -- South Africa -- Eastern Cape , Jackals -- Food , Mammals -- Identification
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5661 , http://hdl.handle.net/10962/d1005345 , Black-backed jackal -- South Africa -- Eastern Cape , Jackals -- South Africa -- Eastern Cape , Jackals -- Food , Mammals -- Identification
- Description: Diet assessments are critical for understanding the foraging behaviour, habitat use and trophic separation of mammalian predators and are vital for gaining insight into how predators influence prey populations. The aim of this research was to qualitatively describe the diet of black-backed jackals (Canis mesomelas, Schreber 1775) using scat analysis on two contrasting land-use types in the Eastern Cape Province, South Africa. Scats were collected on a monthly basis from November 2009 to October 2010 from two game reserves (Great Fish River Reserve and Shamwari Private Game Reserve) and two neighbouring livestock farms. The relative frequency of occurrence of mammal hair (33 – 47 %) and vegetation (32 – 45%)dominated jackal diet throughout the year across the four study sites. Other important prey items included invertebrates (8 – 21 %) and fruit and seeds (3 – 11 %). Birds and reptiles constituted ≤ 2 % of the diet and were only recorded on the game reserves. Significant seasonal dietary shifts were observed on the game reserves but not on the farms. Fruit and seeds were significantly more frequent in the diet during autumn at Great Fish River Reserve and invertebrates were significantly less common in the diet during winter on both reserves. In addition, vegetation was significantly more common in the diet during winter at Shamwari Private Game Reserve. The significant temporal variation of certain prey items is testament to black-backed jackals being opportunistic generalists, foraging on those food items which are most abundant, accessible and energetically beneficial. Land-use type also influenced the diet of black-backed jackals with significantly more invertebrates and, fruit and seeds being recorded on the game reserves than on the farms. By contrast, significantly more mammal hair and vegetation were present in the diet on the farms compared with the game reserves. The mammalian component of the diet was dominated by ruminants and rodents on the game reserves and by ruminants and livestock on the farms. The presence of livestock in the diet of black-backed jackals on the farms highlights their potential impact on the livestock industry in the region and may assist farmers in determining which predators are responsible for stock loss. Previous approaches for identifying mammalian hairs from predator scats have utilised dichotomous keys and reference collections but these are often time-consuming and require a trained individual to carry out the identification. Thus, I also tested the efficacy of an automated pattern recognition programme (HairSnap) for identifying mammalian hairs from black-backed jackal scats. The overall accuracy of the programme was 38 % with black-backed jackal, Greater kudu (Tragelaphus strepsiceros) and striped polecat (Ictonyx striatus) hairs being accurately identified more often (70 – 80 %) than any other species tested. It is likely that both the size and species composition of the sample resulted in the poor accuracy of the programme. However, with the implementation of several improvement measures (e.g. adjustment of the algorithm) the programme may offer a superior, bias-free method of mammalian hair identification. The dietary information gathered here furthers our knowledge of the biology of the blackbacked jackals, especially in the locally important thicket biome. Moreover, understanding their foraging habits allows for more effective management of the species on both game reserves and farmlands. I recommend that future research should focus on quantitatively assessing the diet of black-backed jackals in the Eastern Cape Province and elsewhere. This will compliment the dietary description provided in this study and may offer a biologically more meaningful indication of the relative importance of the prey items.
- Full Text:
- Date Issued: 2012
The dispersal of African wild dogs (Lycaon Pictus) from protected areas in the Northern KwaZulu‐Natal Province, South Africa.
- Whittington‐Jones, Brendan Mark
- Authors: Whittington‐Jones, Brendan Mark
- Date: 2012
- Subjects: African wild dog , African wild dog -- Conservation -- South Africa -- KwazuluNatal , African wild dog -- Dispersal -- South Africa -- KwaZulu-Natal , African wild dog -- Effect of human beings on -- South Africa -- KwaZulu Natal
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5893 , http://hdl.handle.net/10962/d1013414
- Description: The number of African wild dogs Lycaon pictus in Northern KwaZulu‐Natal, South Africa has increased substantially over the last six years. This is largely due to a managed metapopulation approach of introductions onto protected areas and private game reserves since 1998. Because of the increasing wild dog population, the likelihood of rural communities surrounding protected areas encountering dispersing wild dogs in northern KwaZulu‐Natal has also increased. Resident wild dog populations currently occur in Hluhluwe‐iMfolozi Park (HiP), Mkhuze Game Reserve (MGR) of Isimangaliso Wetland Park and Thanda Private Game Reserve (TPGR) all of which are bordered by a matrix of natural habitats and human settlements. Thus, land outside these protected areas could be utilized to expand wild dog distribution and provide connectivity between existing resident populations of wild dogs within KwaZulu‐Natal. To investigate the viability of such an approach, Maximum Entropy Modelling (Maxent) was used to characterize habitat niche selection of dispersing wild dogs, and to identify potential dispersal linkages between current wild dog metapopulation reserves. The model was calibrated using 132 location points collected from 2006 until 2009. From 2008 to 2009 I also conducted a survey of 247 community members in tribal authorities bordering HiP and MGR, to understand factors influencing attitudes towards wild dogs. A habitat suitability model with seven predictor variables had an AUC of 0.96 (SD = 0.02) and indicated four variables which best predicted probability of presence for dispersing wild dogs: elevation, road density, land cover and human density. The results suggest that elevation and land cover may be of greater influence for dispersing wild dogs than human density or activity. Elevation was the single most effective variable indicating a higher probability of presence for dispersing wild dogs in lower lying locations; peaking at approximately 200 – 300m a.s.l. Wild dogs also showed a preference for Woodland and Bushland habitats which in KwaZulu‐Natal tend to be found on lower lying topography. A preference for areas of lower human density and a highest probability of presence at road densities of approximately 0.7km/km2 or less would suggest that while wild dogs may show a tendency to avoid areas of high human activity, they can coexist in close proximity to humans. Respondent’s attitudes, knowledge of wild dogs and livestock husbandry were interpreted by the development of a set of indices. Attitudes were positively related to formal education levels and wild dog‐specific education, but were not influenced by demographic factors such as gender, age and employment status. Eighty three percent of respondents believed efforts to protect wild dogs should continue. Respondents with higher numbers of livestock tended to have more positive attitudes towards wild dogs despite generally incurring higher losses to carnivore depredation than those with less livestock. This appears to be because the financial burden of livestock losses to those with fewer livestock is perceived to be a loss of a greater proportion of total financial wealth. The study highlighted the substantial scope for improvement in livestock management. Theft (34 percent), drought (30 percent) and disease (14 percent) were ranked as the greatest problems facing livestock owners while predators were ranked as the greatest problem by only 4 percent of respondents. My findings suggest that wild dogs are generally viewed positively or with ambivalence. Concerns over the potentially increasing threat to livestock, as natural prey numbers outside protected areas decline and wild dogs disperse from natal packs, are likely to be manageable. However, wild dog population expansion within KwaZulu‐Natal will continue to rely on managed core populations on perimeter‐fenced metapopulation reserves with tolerant communities and landowners contributing to the connectivity of isolated reserves. Generation of tolerance can be instilled through continued advocacy and education, supported by conflict mitigation initiatives and rapid response to conflict reports. The implementation of incentive schemes for adjoining private landowners to co‐manage wild dog populations will need to be addressed in conjunction with managed metapopulation practices and law enforcement, to promote range expansion, and reduce potentially lethal edge effects and wild dog‐human conflict.
- Full Text:
- Date Issued: 2012
- Authors: Whittington‐Jones, Brendan Mark
- Date: 2012
- Subjects: African wild dog , African wild dog -- Conservation -- South Africa -- KwazuluNatal , African wild dog -- Dispersal -- South Africa -- KwaZulu-Natal , African wild dog -- Effect of human beings on -- South Africa -- KwaZulu Natal
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5893 , http://hdl.handle.net/10962/d1013414
- Description: The number of African wild dogs Lycaon pictus in Northern KwaZulu‐Natal, South Africa has increased substantially over the last six years. This is largely due to a managed metapopulation approach of introductions onto protected areas and private game reserves since 1998. Because of the increasing wild dog population, the likelihood of rural communities surrounding protected areas encountering dispersing wild dogs in northern KwaZulu‐Natal has also increased. Resident wild dog populations currently occur in Hluhluwe‐iMfolozi Park (HiP), Mkhuze Game Reserve (MGR) of Isimangaliso Wetland Park and Thanda Private Game Reserve (TPGR) all of which are bordered by a matrix of natural habitats and human settlements. Thus, land outside these protected areas could be utilized to expand wild dog distribution and provide connectivity between existing resident populations of wild dogs within KwaZulu‐Natal. To investigate the viability of such an approach, Maximum Entropy Modelling (Maxent) was used to characterize habitat niche selection of dispersing wild dogs, and to identify potential dispersal linkages between current wild dog metapopulation reserves. The model was calibrated using 132 location points collected from 2006 until 2009. From 2008 to 2009 I also conducted a survey of 247 community members in tribal authorities bordering HiP and MGR, to understand factors influencing attitudes towards wild dogs. A habitat suitability model with seven predictor variables had an AUC of 0.96 (SD = 0.02) and indicated four variables which best predicted probability of presence for dispersing wild dogs: elevation, road density, land cover and human density. The results suggest that elevation and land cover may be of greater influence for dispersing wild dogs than human density or activity. Elevation was the single most effective variable indicating a higher probability of presence for dispersing wild dogs in lower lying locations; peaking at approximately 200 – 300m a.s.l. Wild dogs also showed a preference for Woodland and Bushland habitats which in KwaZulu‐Natal tend to be found on lower lying topography. A preference for areas of lower human density and a highest probability of presence at road densities of approximately 0.7km/km2 or less would suggest that while wild dogs may show a tendency to avoid areas of high human activity, they can coexist in close proximity to humans. Respondent’s attitudes, knowledge of wild dogs and livestock husbandry were interpreted by the development of a set of indices. Attitudes were positively related to formal education levels and wild dog‐specific education, but were not influenced by demographic factors such as gender, age and employment status. Eighty three percent of respondents believed efforts to protect wild dogs should continue. Respondents with higher numbers of livestock tended to have more positive attitudes towards wild dogs despite generally incurring higher losses to carnivore depredation than those with less livestock. This appears to be because the financial burden of livestock losses to those with fewer livestock is perceived to be a loss of a greater proportion of total financial wealth. The study highlighted the substantial scope for improvement in livestock management. Theft (34 percent), drought (30 percent) and disease (14 percent) were ranked as the greatest problems facing livestock owners while predators were ranked as the greatest problem by only 4 percent of respondents. My findings suggest that wild dogs are generally viewed positively or with ambivalence. Concerns over the potentially increasing threat to livestock, as natural prey numbers outside protected areas decline and wild dogs disperse from natal packs, are likely to be manageable. However, wild dog population expansion within KwaZulu‐Natal will continue to rely on managed core populations on perimeter‐fenced metapopulation reserves with tolerant communities and landowners contributing to the connectivity of isolated reserves. Generation of tolerance can be instilled through continued advocacy and education, supported by conflict mitigation initiatives and rapid response to conflict reports. The implementation of incentive schemes for adjoining private landowners to co‐manage wild dog populations will need to be addressed in conjunction with managed metapopulation practices and law enforcement, to promote range expansion, and reduce potentially lethal edge effects and wild dog‐human conflict.
- Full Text:
- Date Issued: 2012
The feeding and spatial ecology of cheetahs (Acinonyx jubatus) and lions (Panthera leo) in the Little Karoo, South Africa
- Authors: Vorster, Paul Hendrik
- Date: 2012
- Subjects: Sanbona Wildlife Reserve , Cheetah -- South Africa -- Little Karoo , Lion -- South Africa -- Little Karoo , Cheetah -- Behavior -- South Africa -- Little Karoo , Lion -- Behavior -- South Africa -- Little Karoo , Cheetah -- Food -- South Africa -- Little Karoo , Lion -- Food -- South Africa -- Little Karoo , Spatial behavior in animals , Predation (Biology) , Game reserves -- Management
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5693 , http://hdl.handle.net/10962/d1005379 , Sanbona Wildlife Reserve , Cheetah -- South Africa -- Little Karoo , Lion -- South Africa -- Little Karoo , Cheetah -- Behavior -- South Africa -- Little Karoo , Lion -- Behavior -- South Africa -- Little Karoo , Cheetah -- Food -- South Africa -- Little Karoo , Lion -- Food -- South Africa -- Little Karoo , Spatial behavior in animals , Predation (Biology) , Game reserves -- Management
- Description: The re-introduction of large carnivores into relatively small conservation areas that fall within the historic distribution range of the species is becoming an increasingly common occurrence. The success of such re-introductions depends very much on the quality of the information that is available to guide management decisions, but in many cases, little information is available. The re-introduction of lions and cheetahs to Sanbona created the opportunity to monitor the behaviour of re-introduced predators to a relatively large system that was characterised by a low ungulate stocking density and little standing water. The broad aims were to study the feeding and spatial ecologies of the lions and cheetahs, to collect standard base-line data, and to examine the effects of the low prey density and limited standing water on habitat selection, range size and diet. The diet (data collected from direct observation and faecal analysis) was similar to that reported in previous studies, and lions and cheetahs preferred greater kudu, black wildebeest and springbok. Lions preferred medium to large prey items, and cheetahs preferred medium to small prey items. The hilly and mountainous terrain of much of the reserve meant that only 50% of the total space was available to the predators. Home ranges of most of the predators were focused around the single large body of standing water. This is likely to have been a response to the water, the vegetation, and the prey that was attracted to these. Habitat selection was also influenced by inter and intra-specific interactions at least for a solitary male lion and female cheetahs. Range sizes were larger than on some other reserves and it is suggested that this was a result of the low prey density. These results form the basis for management recommendations including the importance of continuing to monitor the system and opening up additional parts of the reserve to the predators.
- Full Text:
- Date Issued: 2012
- Authors: Vorster, Paul Hendrik
- Date: 2012
- Subjects: Sanbona Wildlife Reserve , Cheetah -- South Africa -- Little Karoo , Lion -- South Africa -- Little Karoo , Cheetah -- Behavior -- South Africa -- Little Karoo , Lion -- Behavior -- South Africa -- Little Karoo , Cheetah -- Food -- South Africa -- Little Karoo , Lion -- Food -- South Africa -- Little Karoo , Spatial behavior in animals , Predation (Biology) , Game reserves -- Management
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5693 , http://hdl.handle.net/10962/d1005379 , Sanbona Wildlife Reserve , Cheetah -- South Africa -- Little Karoo , Lion -- South Africa -- Little Karoo , Cheetah -- Behavior -- South Africa -- Little Karoo , Lion -- Behavior -- South Africa -- Little Karoo , Cheetah -- Food -- South Africa -- Little Karoo , Lion -- Food -- South Africa -- Little Karoo , Spatial behavior in animals , Predation (Biology) , Game reserves -- Management
- Description: The re-introduction of large carnivores into relatively small conservation areas that fall within the historic distribution range of the species is becoming an increasingly common occurrence. The success of such re-introductions depends very much on the quality of the information that is available to guide management decisions, but in many cases, little information is available. The re-introduction of lions and cheetahs to Sanbona created the opportunity to monitor the behaviour of re-introduced predators to a relatively large system that was characterised by a low ungulate stocking density and little standing water. The broad aims were to study the feeding and spatial ecologies of the lions and cheetahs, to collect standard base-line data, and to examine the effects of the low prey density and limited standing water on habitat selection, range size and diet. The diet (data collected from direct observation and faecal analysis) was similar to that reported in previous studies, and lions and cheetahs preferred greater kudu, black wildebeest and springbok. Lions preferred medium to large prey items, and cheetahs preferred medium to small prey items. The hilly and mountainous terrain of much of the reserve meant that only 50% of the total space was available to the predators. Home ranges of most of the predators were focused around the single large body of standing water. This is likely to have been a response to the water, the vegetation, and the prey that was attracted to these. Habitat selection was also influenced by inter and intra-specific interactions at least for a solitary male lion and female cheetahs. Range sizes were larger than on some other reserves and it is suggested that this was a result of the low prey density. These results form the basis for management recommendations including the importance of continuing to monitor the system and opening up additional parts of the reserve to the predators.
- Full Text:
- Date Issued: 2012
The trophic ecology of parrotfish of Zanzibar application of stable isotope analysis
- Plass-Johnson, Jeremiah Grahm
- Authors: Plass-Johnson, Jeremiah Grahm
- Date: 2012
- Subjects: Parrotfishes -- Tanzania -- Zanzibar , Parrotfishes , Parrotfishes -- Ecology -- Tanzania -- Zanzibar , Parrotfishes -- Behavior -- Tanzania -- Zanzibar , Parrotfishes -- Food -- Tanzania -- Zanzibar , Scleractinia -- Tanzania -- Zanzibar , Algae -- Tanzania -- Zanzibar , Coral reefs and islands -- Tanzania -- Zanzibar , Coral reef fishes -- Tanzania -- Zanzibar , Stable isotopes
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5789 , http://hdl.handle.net/10962/d1005477 , Parrotfishes -- Tanzania -- Zanzibar , Parrotfishes , Parrotfishes -- Ecology -- Tanzania -- Zanzibar , Parrotfishes -- Behavior -- Tanzania -- Zanzibar , Parrotfishes -- Food -- Tanzania -- Zanzibar , Scleractinia -- Tanzania -- Zanzibar , Algae -- Tanzania -- Zanzibar , Coral reefs and islands -- Tanzania -- Zanzibar , Coral reef fishes -- Tanzania -- Zanzibar , Stable isotopes
- Description: Parrotfish are a critical component of the herbivore functional group on tropical coral reefs around the world because they mediate competition that occurs between algae and scleractinian corals. Also, because of their feeding technique, which consists of rasping at the substratum with their beak-like teeth, they play an important role in carbonate turnover and the clearing of reef surface area for the settlement of new sessile organisms. Because of these roles, parrotfishes are an important structuring component of coral reef communities. However, individual species can play different roles depending on their physiology, behaviour and ecology. Despite the possible ecological differences that may exist amongst species, specific roles of the fishes remain unclear as the group is most often studied at higher community levels. This thesis applied stable isotope analysis to differing levels of organisation within a parrotfish community to help elucidate their trophic ecology on coral reefs in Zanzibar. Firstly, blood and muscle tissues were compared to identify differences in their isotope signatures. In other organisms, blood turns over faster than muscle tissue so that muscle tissue represents the diet as integrated over a longer period of time. In most species of parrotfish the blood and muscle δ¹³C signatures were not found to be significantly different, but the δ¹⁵N signatures were significantly different between tissues. This indicated that the δ¹³C signature of both tissues would reveal similar dietary information. Conversely, differences in the δ¹⁵N signature indicated that the nitrogen relationship between tissues was more complicated. Secondly, spatial variability in parrotfish, coral, detritus and macroalgae isotope signatures was assessed at different scales. In macroalgae and coral tissues (zooxanthellae and polyp treated separately), the δ¹³C signatures were shown to differ with depth, presumably because of changes in photosynthetic processes related to depth-associated changes in light. While δ¹⁵N signatures were not affected by depth, all organisms showed enrichment at the Nyange reef, the closest reef to the capital of Zanzibar, Stone Town, presumably reflecting the effects of sewage outfall. These results show that processes that impact the δ¹⁵N signatures of primary producers (macroalgae and zooxanthellae) can be traced to higher trophic levels (coral polyps and fish). Lastly, δ¹³C and δ¹⁵N signatures were used to identify ontogenetic dietary changes in multiple species of parrotfish. Four of the species showed stages that varied from the diets that are normally assumed on the basis of their dentition and feeding technique. This indicates that functional roles based on taxonomy or morphology may fail to include possible ontogenetic dietary changes, and may also fail to elucidate the full impact a species could have on coral reef communities. The conclusions from these studies indicate that the species-specific ecological role of parrotfish in coral reef communities can be complex within and between species, and may differ amongst reefs. In light of the natural and anthropogenic pressures that affect coral reef systems, management decisions based on a more complete understanding of the role of these fish in coral reef communities will help decisions that maintain resilience in these fragile systems.
- Full Text:
- Date Issued: 2012
- Authors: Plass-Johnson, Jeremiah Grahm
- Date: 2012
- Subjects: Parrotfishes -- Tanzania -- Zanzibar , Parrotfishes , Parrotfishes -- Ecology -- Tanzania -- Zanzibar , Parrotfishes -- Behavior -- Tanzania -- Zanzibar , Parrotfishes -- Food -- Tanzania -- Zanzibar , Scleractinia -- Tanzania -- Zanzibar , Algae -- Tanzania -- Zanzibar , Coral reefs and islands -- Tanzania -- Zanzibar , Coral reef fishes -- Tanzania -- Zanzibar , Stable isotopes
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5789 , http://hdl.handle.net/10962/d1005477 , Parrotfishes -- Tanzania -- Zanzibar , Parrotfishes , Parrotfishes -- Ecology -- Tanzania -- Zanzibar , Parrotfishes -- Behavior -- Tanzania -- Zanzibar , Parrotfishes -- Food -- Tanzania -- Zanzibar , Scleractinia -- Tanzania -- Zanzibar , Algae -- Tanzania -- Zanzibar , Coral reefs and islands -- Tanzania -- Zanzibar , Coral reef fishes -- Tanzania -- Zanzibar , Stable isotopes
- Description: Parrotfish are a critical component of the herbivore functional group on tropical coral reefs around the world because they mediate competition that occurs between algae and scleractinian corals. Also, because of their feeding technique, which consists of rasping at the substratum with their beak-like teeth, they play an important role in carbonate turnover and the clearing of reef surface area for the settlement of new sessile organisms. Because of these roles, parrotfishes are an important structuring component of coral reef communities. However, individual species can play different roles depending on their physiology, behaviour and ecology. Despite the possible ecological differences that may exist amongst species, specific roles of the fishes remain unclear as the group is most often studied at higher community levels. This thesis applied stable isotope analysis to differing levels of organisation within a parrotfish community to help elucidate their trophic ecology on coral reefs in Zanzibar. Firstly, blood and muscle tissues were compared to identify differences in their isotope signatures. In other organisms, blood turns over faster than muscle tissue so that muscle tissue represents the diet as integrated over a longer period of time. In most species of parrotfish the blood and muscle δ¹³C signatures were not found to be significantly different, but the δ¹⁵N signatures were significantly different between tissues. This indicated that the δ¹³C signature of both tissues would reveal similar dietary information. Conversely, differences in the δ¹⁵N signature indicated that the nitrogen relationship between tissues was more complicated. Secondly, spatial variability in parrotfish, coral, detritus and macroalgae isotope signatures was assessed at different scales. In macroalgae and coral tissues (zooxanthellae and polyp treated separately), the δ¹³C signatures were shown to differ with depth, presumably because of changes in photosynthetic processes related to depth-associated changes in light. While δ¹⁵N signatures were not affected by depth, all organisms showed enrichment at the Nyange reef, the closest reef to the capital of Zanzibar, Stone Town, presumably reflecting the effects of sewage outfall. These results show that processes that impact the δ¹⁵N signatures of primary producers (macroalgae and zooxanthellae) can be traced to higher trophic levels (coral polyps and fish). Lastly, δ¹³C and δ¹⁵N signatures were used to identify ontogenetic dietary changes in multiple species of parrotfish. Four of the species showed stages that varied from the diets that are normally assumed on the basis of their dentition and feeding technique. This indicates that functional roles based on taxonomy or morphology may fail to include possible ontogenetic dietary changes, and may also fail to elucidate the full impact a species could have on coral reef communities. The conclusions from these studies indicate that the species-specific ecological role of parrotfish in coral reef communities can be complex within and between species, and may differ amongst reefs. In light of the natural and anthropogenic pressures that affect coral reef systems, management decisions based on a more complete understanding of the role of these fish in coral reef communities will help decisions that maintain resilience in these fragile systems.
- Full Text:
- Date Issued: 2012
Trophic ecology of breeding northern rockhopper penguins, Eudyptes Moseleyi, at Tristan da Cunha, South Atlantic Ocean
- Authors: Booth, Jenny Marie
- Date: 2012
- Subjects: Penguins -- Breeding -- Tristan da Cunha , Penguins -- Ecology -- Tristan da Cunha , Penguins -- Food
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5788 , http://hdl.handle.net/10962/d1005476 , Penguins -- Breeding -- Tristan da Cunha , Penguins -- Ecology -- Tristan da Cunha , Penguins -- Food
- Description: Northern Rockhopper penguin populations, Eudyptes moseleyi, are declining globally, and at Tristan da Cunha have undergone severe declines (> 90% in the last 130 years), the cause(s)of which are unknown. There is a paucity of data on this species in the South Atlantic Ocean, therefore their trophic ecology at Tristan da Cunha was studied, specifically focusing on diet, using stomach content analysis and stable isotope analysis (SIA), in conjunction with an analysis of diving behaviour, assessed using temperature-depth recorders. In order to evaluate the influence of gender on foraging, a morphometric investigation of sexual dimorphism was confirmed using molecular analysis. Additionally, plasma corticosterone levels were measured to examine breeding stage and presence of blood parasites as potential sources of stress during the breeding season. Northern Rockhopper penguins at Tristan da Cunha displayed a high degree of foraging plasticity, and fed opportunistically on a wide variety of prey, probably reflecting local small-scale changes in prey distribution. Zooplankton dominated (by mass) the diet of guard stage females, whereas small meso-pelagic fish (predominantly Photichthyidae)dominated diet of adults of both sexes in the crèche stage, with cephalopods contributing equally in both stages. Adults consistently fed chicks on lower-trophic level prey (assessed using SIA), probably zooplankton, than they consumed themselves indicating that the increasing demands of growing chicks were not met by adults through provisioning of higher- quality prey. SIA also indicated that adults foraged in different oceanic water masses when feeding for self-maintenance and for chick provisioning, thus temporally segregating the prey consumed for different purposes. It is possible that adults ‘selected’ these higher quality prey for themselves, or this may be a reflection of opportunistic behaviour. At Tristan da Cunha sexual dimorphism was observed in culmen dimensions (length, depth, width), with males having larger beaks and feeding on larger individuals of squid and fish than females. No sexual segregation in terms of foraging habitat (i.e. different water masses, based on ð¹³N or trophic level ð¹⁵N) during the breeding season or pre-moult period was revealed through SIA, and stomach content analysis revealed no sexual differences in prey species targeted. The results of SIA of feathers indicate that during the pre-moult period birds foraged in different water masses than during the breeding period. The fact that throughout the breeding season birds foraged in similar habitats suggests no intra-specific competition, despite both sexes feeding on the same prey.Birds were generally diurnal, daily foragers (12 – 16 hr trips), with extended trips (maximum duration 35.5 hours) and nocturnal diving recorded in a few individuals. Birds dived well within their physiological limits, predominantly utilising the upper 20m of the water column, employing two different strategies to target different prey items. Long, deep (30 – 40 m), energetically costly dives were performed when targeting energy-rich prey (fish), and a greater number of shorter, shallower (5 – 20 m), energy-efficient dives were performed when targeting prey with a lower energy content (zooplankton). More than half of the sampled study population were infected with the intra-cellular blood parasite Babesia, but infection showed no relationship to body mass, corticosterone levels or breeding success. Fasting birds showed no signs of elevated corticosterone levels, suggesting they had acquired sufficient fat reserves prior to breeding. Failed breeders did not exhibit elevated corticosterone levels. Tristan skuas, Catharacta antarctica hamiltoni, were observed to be a significant cause of egg and chick mortality. The absence of sex-based differences in foraging, and the absence of any signs of stress in relation to body mass, presence of Babesia or breeding stage, suggest that there are no obvious signs of high levels of stress or food limitations during breeding at Tristan da Cunha.
- Full Text:
- Date Issued: 2012
- Authors: Booth, Jenny Marie
- Date: 2012
- Subjects: Penguins -- Breeding -- Tristan da Cunha , Penguins -- Ecology -- Tristan da Cunha , Penguins -- Food
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5788 , http://hdl.handle.net/10962/d1005476 , Penguins -- Breeding -- Tristan da Cunha , Penguins -- Ecology -- Tristan da Cunha , Penguins -- Food
- Description: Northern Rockhopper penguin populations, Eudyptes moseleyi, are declining globally, and at Tristan da Cunha have undergone severe declines (> 90% in the last 130 years), the cause(s)of which are unknown. There is a paucity of data on this species in the South Atlantic Ocean, therefore their trophic ecology at Tristan da Cunha was studied, specifically focusing on diet, using stomach content analysis and stable isotope analysis (SIA), in conjunction with an analysis of diving behaviour, assessed using temperature-depth recorders. In order to evaluate the influence of gender on foraging, a morphometric investigation of sexual dimorphism was confirmed using molecular analysis. Additionally, plasma corticosterone levels were measured to examine breeding stage and presence of blood parasites as potential sources of stress during the breeding season. Northern Rockhopper penguins at Tristan da Cunha displayed a high degree of foraging plasticity, and fed opportunistically on a wide variety of prey, probably reflecting local small-scale changes in prey distribution. Zooplankton dominated (by mass) the diet of guard stage females, whereas small meso-pelagic fish (predominantly Photichthyidae)dominated diet of adults of both sexes in the crèche stage, with cephalopods contributing equally in both stages. Adults consistently fed chicks on lower-trophic level prey (assessed using SIA), probably zooplankton, than they consumed themselves indicating that the increasing demands of growing chicks were not met by adults through provisioning of higher- quality prey. SIA also indicated that adults foraged in different oceanic water masses when feeding for self-maintenance and for chick provisioning, thus temporally segregating the prey consumed for different purposes. It is possible that adults ‘selected’ these higher quality prey for themselves, or this may be a reflection of opportunistic behaviour. At Tristan da Cunha sexual dimorphism was observed in culmen dimensions (length, depth, width), with males having larger beaks and feeding on larger individuals of squid and fish than females. No sexual segregation in terms of foraging habitat (i.e. different water masses, based on ð¹³N or trophic level ð¹⁵N) during the breeding season or pre-moult period was revealed through SIA, and stomach content analysis revealed no sexual differences in prey species targeted. The results of SIA of feathers indicate that during the pre-moult period birds foraged in different water masses than during the breeding period. The fact that throughout the breeding season birds foraged in similar habitats suggests no intra-specific competition, despite both sexes feeding on the same prey.Birds were generally diurnal, daily foragers (12 – 16 hr trips), with extended trips (maximum duration 35.5 hours) and nocturnal diving recorded in a few individuals. Birds dived well within their physiological limits, predominantly utilising the upper 20m of the water column, employing two different strategies to target different prey items. Long, deep (30 – 40 m), energetically costly dives were performed when targeting energy-rich prey (fish), and a greater number of shorter, shallower (5 – 20 m), energy-efficient dives were performed when targeting prey with a lower energy content (zooplankton). More than half of the sampled study population were infected with the intra-cellular blood parasite Babesia, but infection showed no relationship to body mass, corticosterone levels or breeding success. Fasting birds showed no signs of elevated corticosterone levels, suggesting they had acquired sufficient fat reserves prior to breeding. Failed breeders did not exhibit elevated corticosterone levels. Tristan skuas, Catharacta antarctica hamiltoni, were observed to be a significant cause of egg and chick mortality. The absence of sex-based differences in foraging, and the absence of any signs of stress in relation to body mass, presence of Babesia or breeding stage, suggest that there are no obvious signs of high levels of stress or food limitations during breeding at Tristan da Cunha.
- Full Text:
- Date Issued: 2012
Biological control of Pereskia aculeata Miller (Cactaceae)
- Authors: Paterson, Iain Douglas
- Date: 2011
- Subjects: Pereskia -- Biological control -- South Africa Cactus -- Biological control -- South Africa Invasive plants -- Biological control -- South Africa Curculionidae -- South Africa Pyralidae -- South Africa Insects as biological pest control agents -- South Africa
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5825 , http://hdl.handle.net/10962/d1007653
- Description: Pereskia aculeata Miller (Cactaceae) is an environmental weed that is damaging to natural ecosystems in South Africa. The plant is native to Central and South America and was first recorded in South Africa in a botanical garden in 1858. In this thesis, research into the biological control of P. aculeata was conducted with the intention of improving the control of the weed. A pre-release study of the relationship between P. aculeata density and native plant biodiversity indicated that P. aculeata has a negative impact on native biodiversity. The native plant biodiversity associated with different P. aculeata densities was used to determine threshold values and goals for the control of the weed. A threshold value of 50% P. aculeata density was calculated, indicating that P. aculeata density must be maintained below 50% in order to conserve native plant biodiversity. The ultimate goal of the control programme should be to maintain P. aculeata densities below 30%. At these densities there was no significant difference in native plant biodiversity from if the weed were absent from the ecosystem. The biological control agent, Phenrica guérini Bechyne (Chrysomelidae), has been released in South Africa but the potential of the agent to impact P. aculeata is not known and no post release evaluation has been conducted. Impact assessment studies indicate that P. guérini does not impact P. aculeata, even at high densities, but the results of greenhouse experiments should be interpreted with caution because of problems with extrapolation into the field. Although observations in the field suggest that P. guérini has reduced P. aculeata densities at one site, it is clear that new biological control agents are needed to reduce the weed to acceptable levels. Identifying the origin of the South African P. aculeata population was believed to be important to the biological control programme due to the disjunct native distribution and intraspecific variation of the species. Natural enemies associated with plant genotypes in different parts of the native distribution may have developed specialised relationships with certain intraspecific variants of the plant, resulting in differences in agent efficacy on certain host plant genotypes. A molecular study indicated that the closest relatives to the South African weed population found in the native distribution were in Rio de Janeiro Province, Brazil. A bioassay experiment in which fitness related traits of the biological control agent, P. guérini, were measured on various P. aculeata genotypes was conducted to determine the importance of host plant intraspecific variation. There was little variation in fitness traits between genotypes and no evidence of intraspecific host plant specialization. Although intraspecific variation had no effect on agent efficacy in the case of P. guérini, it is possible that other natural enemies may be more specialized. Genotype matching is expected to be more important when natural enemies likely to be specialised to individual genotypes are considered for biological control. Potential biological control agents were prioritized from data collected on surveys in the native distribution. The most promising of these, based on the presence of feeding, incidence, predicted host range, climatic matching, genotype matching and mode of damage, are two species of Curculionidae, the current biological control agent P. guérini and the stem boring moth, Maracayia chiorisalis Walker (Crambidae). The two curculionid species and M. chlorisalis should be considered priorities for host specificity studies. Releases of P. guérini and any new biological control agents should be made at sites where the pre-release study was conducted so that post-release evaluation data can be compared with the pre-release data and the impact of biological control can be evaluated. Retrospective analyses of biological control programmes provide important ways of improving aspects of biological control programmes, such as methods of agent selection. The evaluation of success in biological control programmes is essential for retrospective analyses because factors that have lead to successes or failures can be analysed. Retrospective analyses of biological control programmes, such as this thesis, may improve weed management, thereby contributing to the conservation of natural resources.
- Full Text:
- Date Issued: 2011
- Authors: Paterson, Iain Douglas
- Date: 2011
- Subjects: Pereskia -- Biological control -- South Africa Cactus -- Biological control -- South Africa Invasive plants -- Biological control -- South Africa Curculionidae -- South Africa Pyralidae -- South Africa Insects as biological pest control agents -- South Africa
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5825 , http://hdl.handle.net/10962/d1007653
- Description: Pereskia aculeata Miller (Cactaceae) is an environmental weed that is damaging to natural ecosystems in South Africa. The plant is native to Central and South America and was first recorded in South Africa in a botanical garden in 1858. In this thesis, research into the biological control of P. aculeata was conducted with the intention of improving the control of the weed. A pre-release study of the relationship between P. aculeata density and native plant biodiversity indicated that P. aculeata has a negative impact on native biodiversity. The native plant biodiversity associated with different P. aculeata densities was used to determine threshold values and goals for the control of the weed. A threshold value of 50% P. aculeata density was calculated, indicating that P. aculeata density must be maintained below 50% in order to conserve native plant biodiversity. The ultimate goal of the control programme should be to maintain P. aculeata densities below 30%. At these densities there was no significant difference in native plant biodiversity from if the weed were absent from the ecosystem. The biological control agent, Phenrica guérini Bechyne (Chrysomelidae), has been released in South Africa but the potential of the agent to impact P. aculeata is not known and no post release evaluation has been conducted. Impact assessment studies indicate that P. guérini does not impact P. aculeata, even at high densities, but the results of greenhouse experiments should be interpreted with caution because of problems with extrapolation into the field. Although observations in the field suggest that P. guérini has reduced P. aculeata densities at one site, it is clear that new biological control agents are needed to reduce the weed to acceptable levels. Identifying the origin of the South African P. aculeata population was believed to be important to the biological control programme due to the disjunct native distribution and intraspecific variation of the species. Natural enemies associated with plant genotypes in different parts of the native distribution may have developed specialised relationships with certain intraspecific variants of the plant, resulting in differences in agent efficacy on certain host plant genotypes. A molecular study indicated that the closest relatives to the South African weed population found in the native distribution were in Rio de Janeiro Province, Brazil. A bioassay experiment in which fitness related traits of the biological control agent, P. guérini, were measured on various P. aculeata genotypes was conducted to determine the importance of host plant intraspecific variation. There was little variation in fitness traits between genotypes and no evidence of intraspecific host plant specialization. Although intraspecific variation had no effect on agent efficacy in the case of P. guérini, it is possible that other natural enemies may be more specialized. Genotype matching is expected to be more important when natural enemies likely to be specialised to individual genotypes are considered for biological control. Potential biological control agents were prioritized from data collected on surveys in the native distribution. The most promising of these, based on the presence of feeding, incidence, predicted host range, climatic matching, genotype matching and mode of damage, are two species of Curculionidae, the current biological control agent P. guérini and the stem boring moth, Maracayia chiorisalis Walker (Crambidae). The two curculionid species and M. chlorisalis should be considered priorities for host specificity studies. Releases of P. guérini and any new biological control agents should be made at sites where the pre-release study was conducted so that post-release evaluation data can be compared with the pre-release data and the impact of biological control can be evaluated. Retrospective analyses of biological control programmes provide important ways of improving aspects of biological control programmes, such as methods of agent selection. The evaluation of success in biological control programmes is essential for retrospective analyses because factors that have lead to successes or failures can be analysed. Retrospective analyses of biological control programmes, such as this thesis, may improve weed management, thereby contributing to the conservation of natural resources.
- Full Text:
- Date Issued: 2011
Development of techniques for the isolation of a granulovirus from potato tuber moth, phthorimaea operculella (Zeller)
- Authors: King, Shirley Anne
- Date: 2011
- Subjects: Potato tuberworm -- Larvae , Agricultural pests -- Biological control , Potato tuberworm , Baculoviruses
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5910 , http://hdl.handle.net/10962/d1015202
- Description: Phthorimaea operculella, commonly known as the Potato Tuber Moth, is an economically important agricultural pest worldwide. The baculovirus, Phthorimaea operculella granulovirus (PhoGV) has been considered as a means of control alternative to chemical control because of its host specificity and harmless impact on other organisms and ecosystems. An isolate of PhoGV obtained from a South African PTM population would be beneficial in the production of a biopesticide, which is not yet available. An efficient and cost-effective rearing method would be advantageous for potential commercial production. Commercial table and seed potato plantations and storage facilities located in Patensie, Bathurst, Howick and Ivanhoe were surveyed for PTM infestations. Patensie was the only site where milky discoloured larvae were found, a potential symptom of PhoGV infection. TEM analysis revealed no virus in these samples. Since no virus was found in the field-collected samples, PTM insects were collected to initiate rearing in the laboratory. PTM was raised by three different methods in the laboratory. A cost/benefit analysis, survival rate, fertility and sex ratio were recorded for each rearing method. Rearing method one was deemed unsuccessful for efficient commercial rearing, as survival percentage and fertility were low. Rearing methods two and three had high survival rates and high fertility, and were efficient and less labour intensive than rearing method one. Rearing method three was the most productive technique, but for commercial production rearing method two was considered the most manageable and efficient. The sex ratio was 1:1 for all three cultures. The cost analysis revealed that rearing methods two and three were less expensive than rearing method one because less labour was required to monitor insects. The success of rearing PTM for 19 months will enable these cultures to be up-scaled to a large production facility for mass rearing. Virus was not found in the field surveys or in laboratory cultures, therefore chemical, temperature, humidity and carbon dioxide stressors were used in an attempt to initiate a baculoviral infection. Symptoms were exhibited in larvae subjected to chemical, temperature and humidity treatments, but these were confirmed by TEM analysis not to be a result of PhoGV infection. The success of rearing PTM in the laboratory suggests that the method could be used in the commercial rearing of the insects in a large mass-rearing facility. The data obtained from induction protocols have allowed for better understanding for future induction for PhoGV and other baculoviruses in other insect species. The failure to isolate a South African PhoGV strain for developing a biopesticide against PTM has motivated further studies in obtaining a baculovirus in order for South Africa to develop a commercial product against this pest.
- Full Text:
- Date Issued: 2011
- Authors: King, Shirley Anne
- Date: 2011
- Subjects: Potato tuberworm -- Larvae , Agricultural pests -- Biological control , Potato tuberworm , Baculoviruses
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5910 , http://hdl.handle.net/10962/d1015202
- Description: Phthorimaea operculella, commonly known as the Potato Tuber Moth, is an economically important agricultural pest worldwide. The baculovirus, Phthorimaea operculella granulovirus (PhoGV) has been considered as a means of control alternative to chemical control because of its host specificity and harmless impact on other organisms and ecosystems. An isolate of PhoGV obtained from a South African PTM population would be beneficial in the production of a biopesticide, which is not yet available. An efficient and cost-effective rearing method would be advantageous for potential commercial production. Commercial table and seed potato plantations and storage facilities located in Patensie, Bathurst, Howick and Ivanhoe were surveyed for PTM infestations. Patensie was the only site where milky discoloured larvae were found, a potential symptom of PhoGV infection. TEM analysis revealed no virus in these samples. Since no virus was found in the field-collected samples, PTM insects were collected to initiate rearing in the laboratory. PTM was raised by three different methods in the laboratory. A cost/benefit analysis, survival rate, fertility and sex ratio were recorded for each rearing method. Rearing method one was deemed unsuccessful for efficient commercial rearing, as survival percentage and fertility were low. Rearing methods two and three had high survival rates and high fertility, and were efficient and less labour intensive than rearing method one. Rearing method three was the most productive technique, but for commercial production rearing method two was considered the most manageable and efficient. The sex ratio was 1:1 for all three cultures. The cost analysis revealed that rearing methods two and three were less expensive than rearing method one because less labour was required to monitor insects. The success of rearing PTM for 19 months will enable these cultures to be up-scaled to a large production facility for mass rearing. Virus was not found in the field surveys or in laboratory cultures, therefore chemical, temperature, humidity and carbon dioxide stressors were used in an attempt to initiate a baculoviral infection. Symptoms were exhibited in larvae subjected to chemical, temperature and humidity treatments, but these were confirmed by TEM analysis not to be a result of PhoGV infection. The success of rearing PTM in the laboratory suggests that the method could be used in the commercial rearing of the insects in a large mass-rearing facility. The data obtained from induction protocols have allowed for better understanding for future induction for PhoGV and other baculoviruses in other insect species. The failure to isolate a South African PhoGV strain for developing a biopesticide against PTM has motivated further studies in obtaining a baculovirus in order for South Africa to develop a commercial product against this pest.
- Full Text:
- Date Issued: 2011
Effects of habitat patch size and isolation on the population structure of two siphonarian limpets
- Authors: Johnson, Linda Gail
- Date: 2011
- Subjects: Siphonaria , Limpets , Population biology , Marine ecology , Habitat selection , Animals -- Dispersal , Ecological heterogeneity , Animal populations , Biodiversity
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5679 , http://hdl.handle.net/10962/d1005364 , Siphonaria , Limpets , Population biology , Marine ecology , Habitat selection , Animals -- Dispersal , Ecological heterogeneity , Animal populations , Biodiversity
- Description: Habitat fragmentation is a fundamental process that determines trends and patterns of distribution and density of organisms. These patterns and trends have been the focus of numerous terrestrial and marine studies and have led to the development of several explanatory hypotheses. Systems and organisms are dynamic and no single hypothesis has adequately accounted for these observed trends. It is therefore important to understand the interaction of these processes and patterns to explain the mechanisms controlling population dynamics. The main aim of this thesis was to test the effect of patch size and isolation on organisms with different modes of dispersal. Mode of dispersal has previously been examined as a factor influencing the effects that habitat fragmentation has on organisms. Very few studies have, however, examined the mode of dispersal of marine organisms because it has long been assumed that marine animals are not directly influenced by habitat fragmentation because of large-scale dispersal. I used two co-occurring species of siphonariid limpets with different modes of dispersal to highlight that not only are marine organisms affected by habitat fragmentation but that they are affected in different ways. The two species of limpet, Siphonaria serrata and Siphonaria concinna, are found within the same habitat and have the same geographic range along the South African coastline, however, they have different modes of dispersal and development. The effect of patch size on organism density has been examined to a great extent with varied results. This study investigated whether habitat patch size played a key role in determining population density and limpet body sizes. The two species are found on the eastern and southern coasts of South Africa were examined across this entire biogeographic range. Patch size was found to have a significant effect on population density of the pelagic developer, S. concinna, but not the direct developing S. serrata. Patch size did play a role in determining limpet body size for both species. S. concinna body size was proposed to be effected directly by patch size whilst S. serrata body size was proposed to be affected indirectly by the effects of the S. concinna densities. The same patterns and trends were observed at five of the seven examined regions across the biogeographic range. The trends observed for S. concinna with respect to patch size conform to the source-sink hypothesis with large habitat patches acting as the source populations whilst the small habitat patches acted as the sink populations. Many previous studies have focused on the effects of habitat patch size at one point in time or over one season. I tested the influence of habitat patch size on the two species of limpets over a period of twelve months to determine whether the trends observed were consistent over time or whether populations varied with time. S. concinna showed a consistently significant difference between small and large patches; whilst S. serrata did not follow a consistent pattern. The mode of dispersal for the two limpets was used to explain the different trends shown by the two species. This examination allowed for the determining of source and sink populations for S. concinna through the examination of fluctuations in limpet body sizes and population densities at small and large habitat patches over twelve months. The direct developing S. serrata trends could not be explained using source-sink theory, as populations were independent from one another. S. serrata demonstrated body size differences at small and large patches which, may be explained by interspecific and intraspecific competition. Habitat isolation is known to play an important role in determining the structure of assemblages and the densities of populations. In this study the population density of the pelagic developing S. concinna showed a weak influence of degree of isolation whilst that of the direct developing S. serrata did not, which may be because of habitat patches along the South African coastline not having great enough degrees of isolation. The population size-structure was influenced directly influenced by isolation for S. concinna, whilst the different population size structure for S. serrata may be explained by assemblage co-dependence. The mode of dispersal showed effects on the relationship of population density and population size-structure with habitat size and isolation. This study indicates the importance of investigating patterns and processes across a range of spatial and temporal scales to gain a comprehensive understanding of factors effecting intertidal organisms.
- Full Text:
- Date Issued: 2011
- Authors: Johnson, Linda Gail
- Date: 2011
- Subjects: Siphonaria , Limpets , Population biology , Marine ecology , Habitat selection , Animals -- Dispersal , Ecological heterogeneity , Animal populations , Biodiversity
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5679 , http://hdl.handle.net/10962/d1005364 , Siphonaria , Limpets , Population biology , Marine ecology , Habitat selection , Animals -- Dispersal , Ecological heterogeneity , Animal populations , Biodiversity
- Description: Habitat fragmentation is a fundamental process that determines trends and patterns of distribution and density of organisms. These patterns and trends have been the focus of numerous terrestrial and marine studies and have led to the development of several explanatory hypotheses. Systems and organisms are dynamic and no single hypothesis has adequately accounted for these observed trends. It is therefore important to understand the interaction of these processes and patterns to explain the mechanisms controlling population dynamics. The main aim of this thesis was to test the effect of patch size and isolation on organisms with different modes of dispersal. Mode of dispersal has previously been examined as a factor influencing the effects that habitat fragmentation has on organisms. Very few studies have, however, examined the mode of dispersal of marine organisms because it has long been assumed that marine animals are not directly influenced by habitat fragmentation because of large-scale dispersal. I used two co-occurring species of siphonariid limpets with different modes of dispersal to highlight that not only are marine organisms affected by habitat fragmentation but that they are affected in different ways. The two species of limpet, Siphonaria serrata and Siphonaria concinna, are found within the same habitat and have the same geographic range along the South African coastline, however, they have different modes of dispersal and development. The effect of patch size on organism density has been examined to a great extent with varied results. This study investigated whether habitat patch size played a key role in determining population density and limpet body sizes. The two species are found on the eastern and southern coasts of South Africa were examined across this entire biogeographic range. Patch size was found to have a significant effect on population density of the pelagic developer, S. concinna, but not the direct developing S. serrata. Patch size did play a role in determining limpet body size for both species. S. concinna body size was proposed to be effected directly by patch size whilst S. serrata body size was proposed to be affected indirectly by the effects of the S. concinna densities. The same patterns and trends were observed at five of the seven examined regions across the biogeographic range. The trends observed for S. concinna with respect to patch size conform to the source-sink hypothesis with large habitat patches acting as the source populations whilst the small habitat patches acted as the sink populations. Many previous studies have focused on the effects of habitat patch size at one point in time or over one season. I tested the influence of habitat patch size on the two species of limpets over a period of twelve months to determine whether the trends observed were consistent over time or whether populations varied with time. S. concinna showed a consistently significant difference between small and large patches; whilst S. serrata did not follow a consistent pattern. The mode of dispersal for the two limpets was used to explain the different trends shown by the two species. This examination allowed for the determining of source and sink populations for S. concinna through the examination of fluctuations in limpet body sizes and population densities at small and large habitat patches over twelve months. The direct developing S. serrata trends could not be explained using source-sink theory, as populations were independent from one another. S. serrata demonstrated body size differences at small and large patches which, may be explained by interspecific and intraspecific competition. Habitat isolation is known to play an important role in determining the structure of assemblages and the densities of populations. In this study the population density of the pelagic developing S. concinna showed a weak influence of degree of isolation whilst that of the direct developing S. serrata did not, which may be because of habitat patches along the South African coastline not having great enough degrees of isolation. The population size-structure was influenced directly influenced by isolation for S. concinna, whilst the different population size structure for S. serrata may be explained by assemblage co-dependence. The mode of dispersal showed effects on the relationship of population density and population size-structure with habitat size and isolation. This study indicates the importance of investigating patterns and processes across a range of spatial and temporal scales to gain a comprehensive understanding of factors effecting intertidal organisms.
- Full Text:
- Date Issued: 2011
Feeding ecology and diet shift of long-beaked common dolphins Delphinus Capensis (Gray 1828) incidentally caught in anti-shark nets off Kwazulu-Natal, South Africa
- Authors: Ambrose, Shan Taryn
- Date: 2011
- Subjects: Common dolphin -- South Africa -- Kwazulu-Natal , Common dolphin -- Food -- South Africa -- Kwazulu-Natal , Common dolphin -- Ecology -- South Africa -- Kwazulu-Natal , Sardinops sagax -- South Africa -- Kwazulu-Natal
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5697 , http://hdl.handle.net/10962/d1005383 , Common dolphin -- South Africa -- Kwazulu-Natal , Common dolphin -- Food -- South Africa -- Kwazulu-Natal , Common dolphin -- Ecology -- South Africa -- Kwazulu-Natal , Sardinops sagax -- South Africa -- Kwazulu-Natal
- Description: The long-beaked common dolphin, Delphinus capensis (Gray 1828), is one of the most enigmatic predators feeding in the annual sardine run (Sardinops sagax) off the coast of KwaZulu-Natal (KZN), South Africa. In recent years, unpredictable inter-annual variations in the timing, spatial extent and intensity of the sardine run have been documented, possibly resulting in changes in the suite of prey available to the common dolphin during winter. Although the diets of a number of predators during the sardine run have been studied in detail (e.g. sharks and flying seabirds), little is known about the diet of long-beaked common dolphins during this period. Each year, a low number of common dolphins are incidentally caught in the anti-shark nets in the waters of KwaZulu-Natal. These captures provide a valuable source of data on selected aspects of the ecology of the long-beaked common dolphins along the KwaZulu-Natal coastline. The objective of this study was to provide new dietary data for the common dolphins feeding in the waters of KwaZulu-Natal during winter over the period 2000 to 2009, as well as to determine if any dietary changes had taken place since the common dolphin diet was last assessed, over 15 years ago. Stomach contents from 95 common dolphins (55 females, 40 males) caught between 2000 and 2009 were analysed and compared to historical data from dolphins caught between 1974 and 1992. Mesopelagic fish and squid dominated the diet, with 23 fish and 5 squid species represented in adult dolphins. Multidimensional Scaling (MDS) indicated that there was no resource partitioning between adult male and female dolphins. Numerical analyses indicated that there was a shift in the principal prey species consumed by the dolphins over the past decade, particularly during the winter. Prior to 1992, sardine comprised up to 49% of the total stomach contents, while chub mackerel (Scomber japonicus) was the dominant prey item (66% by mass) recorded in the stomach contents over the period 2000 to 2009. The shift in the relative contributions of sardine and mackerel in the diets of the dolphin appeared to correspond to fluctuations in the availability of the two principal prey species. Between 2000 and 2009, the diversity of the dolphins' diets was highest during the sardine run, reflecting the presence of a wide suite of predatory teleosts in the waters of KwaZulu-Natal during the annual sardine run. Conversely, prior to 2000, the diet was dominated by sardine during the peak of the sardine run, whilst diet diversity increased after this period. Apart from sardine and chub mackerel, elf (Pomatomus saltatrix), maasbanker (Trachurus delagoa), strepie (Sarpa salpa) and flying fish (Exocoetid sp.) also formed important components of the diet both prior to 1992, and over the last decade. Blubber thickness was assessed as an indicator of animal condition. No significant change in blubber total weight (R² = 0.0016, N = 185), nor dorsal, lateral or ventral blubber thickness (R² = 0.3146, R² = 0.0003, and R² = 0.0003 respectively, N = 78) was seen over the last 30 years (1970 to 2009). Results of stable isotope analyses conducted on tissue derived from the teeth of D. capensis indicated that there has been no significant shift in the trophic position (δ¹⁵N) and potential prey consumed (δ¹³C) over the corresponding period. These data would suggest that the long-beaked common dolphins along the KwaZulu-Natal coastline can be considered as opportunistic predators generally consuming the most abundant prey species available locally. As common dolphins feed opportunistically, this dietary shift appears to indicate changes in the shoaling characteristics of the most abundant fish prey in KwaZulu-Natal during winter. Given the “Data Deficient” status of the long-beaked common dolphin on the IUCN Red Data List, and the strong climatic forcing of the sardine run, such dietary data have important implications for their conservation in the light of expanding fisheries and climate change.
- Full Text:
- Date Issued: 2011
- Authors: Ambrose, Shan Taryn
- Date: 2011
- Subjects: Common dolphin -- South Africa -- Kwazulu-Natal , Common dolphin -- Food -- South Africa -- Kwazulu-Natal , Common dolphin -- Ecology -- South Africa -- Kwazulu-Natal , Sardinops sagax -- South Africa -- Kwazulu-Natal
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5697 , http://hdl.handle.net/10962/d1005383 , Common dolphin -- South Africa -- Kwazulu-Natal , Common dolphin -- Food -- South Africa -- Kwazulu-Natal , Common dolphin -- Ecology -- South Africa -- Kwazulu-Natal , Sardinops sagax -- South Africa -- Kwazulu-Natal
- Description: The long-beaked common dolphin, Delphinus capensis (Gray 1828), is one of the most enigmatic predators feeding in the annual sardine run (Sardinops sagax) off the coast of KwaZulu-Natal (KZN), South Africa. In recent years, unpredictable inter-annual variations in the timing, spatial extent and intensity of the sardine run have been documented, possibly resulting in changes in the suite of prey available to the common dolphin during winter. Although the diets of a number of predators during the sardine run have been studied in detail (e.g. sharks and flying seabirds), little is known about the diet of long-beaked common dolphins during this period. Each year, a low number of common dolphins are incidentally caught in the anti-shark nets in the waters of KwaZulu-Natal. These captures provide a valuable source of data on selected aspects of the ecology of the long-beaked common dolphins along the KwaZulu-Natal coastline. The objective of this study was to provide new dietary data for the common dolphins feeding in the waters of KwaZulu-Natal during winter over the period 2000 to 2009, as well as to determine if any dietary changes had taken place since the common dolphin diet was last assessed, over 15 years ago. Stomach contents from 95 common dolphins (55 females, 40 males) caught between 2000 and 2009 were analysed and compared to historical data from dolphins caught between 1974 and 1992. Mesopelagic fish and squid dominated the diet, with 23 fish and 5 squid species represented in adult dolphins. Multidimensional Scaling (MDS) indicated that there was no resource partitioning between adult male and female dolphins. Numerical analyses indicated that there was a shift in the principal prey species consumed by the dolphins over the past decade, particularly during the winter. Prior to 1992, sardine comprised up to 49% of the total stomach contents, while chub mackerel (Scomber japonicus) was the dominant prey item (66% by mass) recorded in the stomach contents over the period 2000 to 2009. The shift in the relative contributions of sardine and mackerel in the diets of the dolphin appeared to correspond to fluctuations in the availability of the two principal prey species. Between 2000 and 2009, the diversity of the dolphins' diets was highest during the sardine run, reflecting the presence of a wide suite of predatory teleosts in the waters of KwaZulu-Natal during the annual sardine run. Conversely, prior to 2000, the diet was dominated by sardine during the peak of the sardine run, whilst diet diversity increased after this period. Apart from sardine and chub mackerel, elf (Pomatomus saltatrix), maasbanker (Trachurus delagoa), strepie (Sarpa salpa) and flying fish (Exocoetid sp.) also formed important components of the diet both prior to 1992, and over the last decade. Blubber thickness was assessed as an indicator of animal condition. No significant change in blubber total weight (R² = 0.0016, N = 185), nor dorsal, lateral or ventral blubber thickness (R² = 0.3146, R² = 0.0003, and R² = 0.0003 respectively, N = 78) was seen over the last 30 years (1970 to 2009). Results of stable isotope analyses conducted on tissue derived from the teeth of D. capensis indicated that there has been no significant shift in the trophic position (δ¹⁵N) and potential prey consumed (δ¹³C) over the corresponding period. These data would suggest that the long-beaked common dolphins along the KwaZulu-Natal coastline can be considered as opportunistic predators generally consuming the most abundant prey species available locally. As common dolphins feed opportunistically, this dietary shift appears to indicate changes in the shoaling characteristics of the most abundant fish prey in KwaZulu-Natal during winter. Given the “Data Deficient” status of the long-beaked common dolphin on the IUCN Red Data List, and the strong climatic forcing of the sardine run, such dietary data have important implications for their conservation in the light of expanding fisheries and climate change.
- Full Text:
- Date Issued: 2011
Initial investigations into dynamics of mesozooplankton community structure in Algoa Bay, South Africa
- Authors: Dali, Luzuko O'Brian
- Date: 2011
- Subjects: Zooplankton -- Research -- Indian Ocean -- South Africa , Phytoplankton -- Research -- Indian Ocean -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5715 , http://hdl.handle.net/10962/d1005401 , Zooplankton -- Research -- Indian Ocean -- South Africa , Phytoplankton -- Research -- Indian Ocean -- South Africa
- Description: As part of a long-term monitoring programme initiated by the South African Environmental Observation Network (SAEON) Elwandle Node, the spatio-temporal dynamics of mesozooplankton (200–2000 μm) community structure in Algoa Bay, on the Eastern Cape coastline of southern Africa, was investigated in summer and winter of 2008. Physical-chemical and biological variables were measured at selected sites in the eastern and western sectors of the Bay. During summer, nutrient rich waters upwelling into the eastern sector of the Bay contributed to significant spatial variation in selected physical-chemical variables. During winter, virtually no significant spatial patterns in the physical-chemical variables were observed (P>0.05 in all cases). For the majority of physical-chemical variables, no significant seasonal patterns in values were detected (P>0.05 in all cases). Notable exceptions were water column stability and water temperatures which were highest during summer, and seston, turbidity and ammonium concentrations which attained the highest values in winter. The striking seasonal pattern observed in the water column stability, coupled with the upwelling event, coincided with a strong seasonal pattern in the total surface and integrated chlorophyll-a concentrations within the Bay. During summer, the total surface phytoplankton biomass ranged from 1.87–3.11 μg.L⁻¹ and the integrated biomass values between 44.6 and 89.1 mg chl-a m⁻². In winter, surface chl-a concentrations ranged from 0.49 to 0.55 μg.L⁻¹ and integrated biomass from 13.5 to 13.8 mg chl-a m⁻². During both seasons, the large microphytoplankton (>20 μm) fraction contributed the most (>80%) to the total phytoplankton biomass suggesting that phytoplankton growth is not nutrient limited within the Bay. The total mesozooplankton abundance and biomass values during summer varied between 10088.92 and 28283.21 ind.m⁻³ and between 76.59 and 161.94 mg.m⁻³, respectively. During winter, total abundance and biomass of mesozooplankton within the Bay were significantly lower, ranging from 2392.49 to 11145.29 ind.m⁻³, and from 34.49 to 42.49 mg.m⁻³, respectively (P<0.05). During both seasons, cosmopolitan copepod species 200–500μm in size dominated the total mesozooplankton counts, numerically and in biomass. Hierarchical cluster analyses identified distinct zooplankton groupings within the Bay during both the summer (three groupings) and winter (four groupings) surveys. The different groupings identified during the two seasons were not associated with any specific geographic region or hydrological feature. Nonetheless, a distinct seasonal pattern in the mesozooplankton community was evident, largely reflecting the increased abundance of mesozooplankton during the summer survey. Canonical Correspondence Analyses (CCA) indicated that the zooplankton community structure within Algoa Bay reflected a complex interaction between physical-chemical (e.g. temperature, water column stability, turbidity, and nitrate, dissolved oxygen and nitrite concentrations) and biological factors (e.g. microphytoplankton and picophytoplankton concentrations). These data provide baseline information towards long-term monitoring programs that will be conducted in Algoa Bay, as part of the South African Environmental Observation Network (SAEON), in the near future.
- Full Text:
- Date Issued: 2011
- Authors: Dali, Luzuko O'Brian
- Date: 2011
- Subjects: Zooplankton -- Research -- Indian Ocean -- South Africa , Phytoplankton -- Research -- Indian Ocean -- South Africa
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5715 , http://hdl.handle.net/10962/d1005401 , Zooplankton -- Research -- Indian Ocean -- South Africa , Phytoplankton -- Research -- Indian Ocean -- South Africa
- Description: As part of a long-term monitoring programme initiated by the South African Environmental Observation Network (SAEON) Elwandle Node, the spatio-temporal dynamics of mesozooplankton (200–2000 μm) community structure in Algoa Bay, on the Eastern Cape coastline of southern Africa, was investigated in summer and winter of 2008. Physical-chemical and biological variables were measured at selected sites in the eastern and western sectors of the Bay. During summer, nutrient rich waters upwelling into the eastern sector of the Bay contributed to significant spatial variation in selected physical-chemical variables. During winter, virtually no significant spatial patterns in the physical-chemical variables were observed (P>0.05 in all cases). For the majority of physical-chemical variables, no significant seasonal patterns in values were detected (P>0.05 in all cases). Notable exceptions were water column stability and water temperatures which were highest during summer, and seston, turbidity and ammonium concentrations which attained the highest values in winter. The striking seasonal pattern observed in the water column stability, coupled with the upwelling event, coincided with a strong seasonal pattern in the total surface and integrated chlorophyll-a concentrations within the Bay. During summer, the total surface phytoplankton biomass ranged from 1.87–3.11 μg.L⁻¹ and the integrated biomass values between 44.6 and 89.1 mg chl-a m⁻². In winter, surface chl-a concentrations ranged from 0.49 to 0.55 μg.L⁻¹ and integrated biomass from 13.5 to 13.8 mg chl-a m⁻². During both seasons, the large microphytoplankton (>20 μm) fraction contributed the most (>80%) to the total phytoplankton biomass suggesting that phytoplankton growth is not nutrient limited within the Bay. The total mesozooplankton abundance and biomass values during summer varied between 10088.92 and 28283.21 ind.m⁻³ and between 76.59 and 161.94 mg.m⁻³, respectively. During winter, total abundance and biomass of mesozooplankton within the Bay were significantly lower, ranging from 2392.49 to 11145.29 ind.m⁻³, and from 34.49 to 42.49 mg.m⁻³, respectively (P<0.05). During both seasons, cosmopolitan copepod species 200–500μm in size dominated the total mesozooplankton counts, numerically and in biomass. Hierarchical cluster analyses identified distinct zooplankton groupings within the Bay during both the summer (three groupings) and winter (four groupings) surveys. The different groupings identified during the two seasons were not associated with any specific geographic region or hydrological feature. Nonetheless, a distinct seasonal pattern in the mesozooplankton community was evident, largely reflecting the increased abundance of mesozooplankton during the summer survey. Canonical Correspondence Analyses (CCA) indicated that the zooplankton community structure within Algoa Bay reflected a complex interaction between physical-chemical (e.g. temperature, water column stability, turbidity, and nitrate, dissolved oxygen and nitrite concentrations) and biological factors (e.g. microphytoplankton and picophytoplankton concentrations). These data provide baseline information towards long-term monitoring programs that will be conducted in Algoa Bay, as part of the South African Environmental Observation Network (SAEON), in the near future.
- Full Text:
- Date Issued: 2011
Quantifying crop damage by Grey crowned crane balearica regulorum regulorum and evaluating changes in crane distribution in the North Eastern Cape, South Africa
- Authors: Van Niekerk, Mark Harry
- Date: 2011
- Subjects: Cranes (Birds) -- South Africa -- Eastern Cape , Cranes (Birds) -- Geographical distribution -- South Africa -- Eastern Cape , Cranes (Birds) -- Behavior -- South Africa -- Eastern Cape , Cranes (Birds) -- Food -- South Africa -- Eastern Cape , Corn -- Effect of grazing on -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5749 , http://hdl.handle.net/10962/d1005436 , Cranes (Birds) -- South Africa -- Eastern Cape , Cranes (Birds) -- Geographical distribution -- South Africa -- Eastern Cape , Cranes (Birds) -- Behavior -- South Africa -- Eastern Cape , Cranes (Birds) -- Food -- South Africa -- Eastern Cape , Corn -- Effect of grazing on -- South Africa -- Eastern Cape
- Description: Complaints of crop damage by cranes on planted maize in the North Eastern Cape, South Africa, have been increasing since the mid-1990‘s, and in some instances severe losses have been reported. Crop damage by the Grey Crowned Crane Balearica regulorum regulorum near the town of Maclear (31º04´S 28º22´E), has been quantified over two growing seasons, and assessed relative to losses caused by foraging Cape Crows Corvus capensis and other feeding damage assumed to be caused by insects. Twelve fields were selected based on previous patterns of crop depredation. Maize seed in seven of the fields was treated with the chemical ‗Gaucho‘ and five fields were planted with untreated maize. In order to determine the source of losses, twenty quadrats (4 m x 4 m) randomly distributed within each field were visited on average every second day, for a period of up to twenty eight days. Results indicate that seed treatments do act as a deterrent to feeding by both cranes and crows, however crane damage is generally insignificant compared to other sources of damage. My study also reviewed past sightings data of the Grey Crowned Crane in an effort to determine if the conversion of former grassland to plantations in this region may have increased foraging activity in maize fields. The data did not allow for clear-cut conclusions regarding changes in distribution or population trends. Conclusions provide direct input into the management of agricultural areas by enabling landowners to take steps to mitigate crop damage. These mitigation measures may either involve the application of seed treatments, or the planting of low risk crops in high risk areas. Future studies should consider the ppossible detrimental effects of chemical seed treatments on crane biology.
- Full Text:
- Date Issued: 2011
- Authors: Van Niekerk, Mark Harry
- Date: 2011
- Subjects: Cranes (Birds) -- South Africa -- Eastern Cape , Cranes (Birds) -- Geographical distribution -- South Africa -- Eastern Cape , Cranes (Birds) -- Behavior -- South Africa -- Eastern Cape , Cranes (Birds) -- Food -- South Africa -- Eastern Cape , Corn -- Effect of grazing on -- South Africa -- Eastern Cape
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5749 , http://hdl.handle.net/10962/d1005436 , Cranes (Birds) -- South Africa -- Eastern Cape , Cranes (Birds) -- Geographical distribution -- South Africa -- Eastern Cape , Cranes (Birds) -- Behavior -- South Africa -- Eastern Cape , Cranes (Birds) -- Food -- South Africa -- Eastern Cape , Corn -- Effect of grazing on -- South Africa -- Eastern Cape
- Description: Complaints of crop damage by cranes on planted maize in the North Eastern Cape, South Africa, have been increasing since the mid-1990‘s, and in some instances severe losses have been reported. Crop damage by the Grey Crowned Crane Balearica regulorum regulorum near the town of Maclear (31º04´S 28º22´E), has been quantified over two growing seasons, and assessed relative to losses caused by foraging Cape Crows Corvus capensis and other feeding damage assumed to be caused by insects. Twelve fields were selected based on previous patterns of crop depredation. Maize seed in seven of the fields was treated with the chemical ‗Gaucho‘ and five fields were planted with untreated maize. In order to determine the source of losses, twenty quadrats (4 m x 4 m) randomly distributed within each field were visited on average every second day, for a period of up to twenty eight days. Results indicate that seed treatments do act as a deterrent to feeding by both cranes and crows, however crane damage is generally insignificant compared to other sources of damage. My study also reviewed past sightings data of the Grey Crowned Crane in an effort to determine if the conversion of former grassland to plantations in this region may have increased foraging activity in maize fields. The data did not allow for clear-cut conclusions regarding changes in distribution or population trends. Conclusions provide direct input into the management of agricultural areas by enabling landowners to take steps to mitigate crop damage. These mitigation measures may either involve the application of seed treatments, or the planting of low risk crops in high risk areas. Future studies should consider the ppossible detrimental effects of chemical seed treatments on crane biology.
- Full Text:
- Date Issued: 2011
Responses of intertidal macroalgae and associated fauna to interactive processes acting over multiple spatial scales
- Authors: Mostert, Bruce Petrus
- Date: 2011 , 2010-12-01
- Subjects: Biodiversity -- South Africa , Spatial ecology , Marine algae -- South Africa , Marine organisms -- Effect of water pollution on
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5890 , http://hdl.handle.net/10962/d1013370
- Description: The decrease of biological diversity from low latitudes near the equator towards high latitudes is one of the most fundamental patterns noted in ecology. These trends have been the subject of numerous terrestrial and marine studies and have caused the proposal of several explanatory hypotheses. No single hypothesis has adequately accounted for these observed trends. Furthermore, large-scale patterns are frequently modified by processes acting at meso- to small-scales. It is imperative to understand the interaction of these processes to elucidate the mechanisms controlling the structure of intertidal assemblages. The main aim of this thesis was to test the influence of multiple processes at a range of spatial scales on biogenic engineers. Biogenic engineers, such as macroalgae, have been reported to be strongly influenced by processes such as grazing, biogeography and upwelling and subsequent effects are expected to be linked to their associated assemblages. I used infaunal assemblages associated with macroalgae as a model system to understand the interactive effects of meso-scale upwelling in conjunction with large-scale factors (regional and biogeographic). Three species of macroalgae, Hypnea spicifera, Champia lumbricalis and Bifurcaria brassicaeformis, inhabiting different but overlapping home ranges were used in this study. Smaller scale, physical attributes and the associated fauna of these algal species were compared. The effects of meso- to large-scale physical gradients on marine organisms have been investigated in many instances and resultant gradients in physical variables observed. This study was undertaken to investigate morphological trends exhibited by Hypnea spicifera and Champia lumbricalis to compare possible similarities between coastlines and to determine if inferred meso- to large-scale processes influence physical trends in a similar manner despite the coastlines being affected by different hydrodynamic processes. The macroalgae were located in two distinctly different upwelling regimes, Hypnea spicifera on the east and south coasts and Champia lumbricalis on the west coast. Upwelling (delivery of nutrients and primary production) was not found to be an important factor in determining the physical characteristics of macroalgae but there were clear patterns linked to latitude. Mean percentage cover of Hypnea spicifera was positively correlated with distance along the east and south coasts. Mean mass and mean surface area of H. spicifera were, however, negatively correlated with distance from Port St Johns. Mean frond length showed a negative trend but this relationship was not statistically significant. On the west coast, there was a significant increase in mean frond length from north to south for Champia lumbricalis. Mean surface area and mean mass of C. lumbricalis exhibited non-significant negative trends from north to south while there was a non-significant positive trend for mean percentage cover. Following the “Productivity Hypothesis”, these patterns from north to south along the coastlines of South Africa could have important implications for biodiversity associated with these algae. Many previous studies have focussed on the effects of upwelling on species (i.e. effects of nutrients and temperature) but have failed to separate this effect from large scale effects such as biogeography and latitudinal gradients. I tested the influence meso-scale upwelling, large-scale biogeographic processes and latitudinal gradients with two different species of macroalgae one on the east and south coasts of South Africa and the other on the west coast. Hypnea spicifera inhabits the east and south coasts of South Africa spanning two biogeographic provinces and is generally affected by relatively weak upwelling, whereas Champia lumbricalis inhabits the west coast spanning one biogeographic province which is subjected to intense persistent upwelling year round. Within the east and west coast biogeographic provinces there are, however, regions with both upwelling and non-upwelling. On the east and south coasts, entire assemblages differed significantly among the three Regions (St Lucia, Port Alfred and Knysna, while assemblages between upwelling/non-upwelling areas were not different. Assemblages on the different shores differed significantly from each other. There were no significant effects of region or upwelling for the number of individuals of Crustacea or Polychaeta, while Mollusca showed a significant effect of region. The number of individuals of other taxa showed a significant interaction of region and upwelling. Region had a significant effect on number of species of molluscs and other taxa, while there was no effect for either region or upwelling for the Crustacea or Polychaeta. In general different factors were shown to be important (region and shore) while upwelling was rarely important. On the west coast assemblages associated with C. lumbricalis were not influenced by region or upwelling but there were significant differences between shores. Region, upwelling ad shore did not affect number of individuals. There was a significant interaction of region and upwelling for the number of species of crustaceans, while numbers of species of Mollusca, Polychaeta and other taxa showed no effects. In general, regional factors strongly influenced most organisms, while upwelling played a minor role. Hypotheses about differences between upwelling and non-upwelling regions in terms of species abundances and composition due to the input of cold nutrient rich water were not supported. A link between the effects of larger-scale biogeographic factors and their influence on habitat forming taxa and the resultant effects on associated infauna would be a likely explanation for the patterns observed in this study. Diversity of assemblages is known to be influenced by the structural complexity of a habitat, increasing complexity increases the amount of available niches therefore potentially increasing the number of species found within that habitat. Three species of macroalgae, Hypnea spicifera, Champia lumbricalis and Bifurcaria brassicaeformis were selected on the basis of being structurally similar and having their distributional ranges overlap in order to elucidate the effects of structure and macroalgal species on associated assemblages. Hypnea spicifera is different in terms of surface area and biomass from Champia lumbricalis and Bifurcaria brassicaeformis. Assemblages of species found on the three rhodophytes showed both shore and the species of alga had significant effects on composition. Only numbers of individuals of molluscs were affected by the species of alga. Crustacea and Polychaeta showed an interaction of the species of alga with shore. In the case of this study, it is likely that the three species of macroalgae mitigate biological stressors such as predation and physical stressors such as wave exposure and desiccation. In general, meso-scale upwelling is suggested to be marginalised when considering the structuring of assemblages associated with macroalgae, while large scale biogeography has more of an influence. Within shores, assemblages were also strongly influenced by smaller-scale factors such as differences in the structure and species of alga. This study indicates the importance of investigating patterns across a range of spatial scales to gain a comprehensive understanding of factors influencing intertidal organisms.
- Full Text:
- Date Issued: 2011
- Authors: Mostert, Bruce Petrus
- Date: 2011 , 2010-12-01
- Subjects: Biodiversity -- South Africa , Spatial ecology , Marine algae -- South Africa , Marine organisms -- Effect of water pollution on
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5890 , http://hdl.handle.net/10962/d1013370
- Description: The decrease of biological diversity from low latitudes near the equator towards high latitudes is one of the most fundamental patterns noted in ecology. These trends have been the subject of numerous terrestrial and marine studies and have caused the proposal of several explanatory hypotheses. No single hypothesis has adequately accounted for these observed trends. Furthermore, large-scale patterns are frequently modified by processes acting at meso- to small-scales. It is imperative to understand the interaction of these processes to elucidate the mechanisms controlling the structure of intertidal assemblages. The main aim of this thesis was to test the influence of multiple processes at a range of spatial scales on biogenic engineers. Biogenic engineers, such as macroalgae, have been reported to be strongly influenced by processes such as grazing, biogeography and upwelling and subsequent effects are expected to be linked to their associated assemblages. I used infaunal assemblages associated with macroalgae as a model system to understand the interactive effects of meso-scale upwelling in conjunction with large-scale factors (regional and biogeographic). Three species of macroalgae, Hypnea spicifera, Champia lumbricalis and Bifurcaria brassicaeformis, inhabiting different but overlapping home ranges were used in this study. Smaller scale, physical attributes and the associated fauna of these algal species were compared. The effects of meso- to large-scale physical gradients on marine organisms have been investigated in many instances and resultant gradients in physical variables observed. This study was undertaken to investigate morphological trends exhibited by Hypnea spicifera and Champia lumbricalis to compare possible similarities between coastlines and to determine if inferred meso- to large-scale processes influence physical trends in a similar manner despite the coastlines being affected by different hydrodynamic processes. The macroalgae were located in two distinctly different upwelling regimes, Hypnea spicifera on the east and south coasts and Champia lumbricalis on the west coast. Upwelling (delivery of nutrients and primary production) was not found to be an important factor in determining the physical characteristics of macroalgae but there were clear patterns linked to latitude. Mean percentage cover of Hypnea spicifera was positively correlated with distance along the east and south coasts. Mean mass and mean surface area of H. spicifera were, however, negatively correlated with distance from Port St Johns. Mean frond length showed a negative trend but this relationship was not statistically significant. On the west coast, there was a significant increase in mean frond length from north to south for Champia lumbricalis. Mean surface area and mean mass of C. lumbricalis exhibited non-significant negative trends from north to south while there was a non-significant positive trend for mean percentage cover. Following the “Productivity Hypothesis”, these patterns from north to south along the coastlines of South Africa could have important implications for biodiversity associated with these algae. Many previous studies have focussed on the effects of upwelling on species (i.e. effects of nutrients and temperature) but have failed to separate this effect from large scale effects such as biogeography and latitudinal gradients. I tested the influence meso-scale upwelling, large-scale biogeographic processes and latitudinal gradients with two different species of macroalgae one on the east and south coasts of South Africa and the other on the west coast. Hypnea spicifera inhabits the east and south coasts of South Africa spanning two biogeographic provinces and is generally affected by relatively weak upwelling, whereas Champia lumbricalis inhabits the west coast spanning one biogeographic province which is subjected to intense persistent upwelling year round. Within the east and west coast biogeographic provinces there are, however, regions with both upwelling and non-upwelling. On the east and south coasts, entire assemblages differed significantly among the three Regions (St Lucia, Port Alfred and Knysna, while assemblages between upwelling/non-upwelling areas were not different. Assemblages on the different shores differed significantly from each other. There were no significant effects of region or upwelling for the number of individuals of Crustacea or Polychaeta, while Mollusca showed a significant effect of region. The number of individuals of other taxa showed a significant interaction of region and upwelling. Region had a significant effect on number of species of molluscs and other taxa, while there was no effect for either region or upwelling for the Crustacea or Polychaeta. In general different factors were shown to be important (region and shore) while upwelling was rarely important. On the west coast assemblages associated with C. lumbricalis were not influenced by region or upwelling but there were significant differences between shores. Region, upwelling ad shore did not affect number of individuals. There was a significant interaction of region and upwelling for the number of species of crustaceans, while numbers of species of Mollusca, Polychaeta and other taxa showed no effects. In general, regional factors strongly influenced most organisms, while upwelling played a minor role. Hypotheses about differences between upwelling and non-upwelling regions in terms of species abundances and composition due to the input of cold nutrient rich water were not supported. A link between the effects of larger-scale biogeographic factors and their influence on habitat forming taxa and the resultant effects on associated infauna would be a likely explanation for the patterns observed in this study. Diversity of assemblages is known to be influenced by the structural complexity of a habitat, increasing complexity increases the amount of available niches therefore potentially increasing the number of species found within that habitat. Three species of macroalgae, Hypnea spicifera, Champia lumbricalis and Bifurcaria brassicaeformis were selected on the basis of being structurally similar and having their distributional ranges overlap in order to elucidate the effects of structure and macroalgal species on associated assemblages. Hypnea spicifera is different in terms of surface area and biomass from Champia lumbricalis and Bifurcaria brassicaeformis. Assemblages of species found on the three rhodophytes showed both shore and the species of alga had significant effects on composition. Only numbers of individuals of molluscs were affected by the species of alga. Crustacea and Polychaeta showed an interaction of the species of alga with shore. In the case of this study, it is likely that the three species of macroalgae mitigate biological stressors such as predation and physical stressors such as wave exposure and desiccation. In general, meso-scale upwelling is suggested to be marginalised when considering the structuring of assemblages associated with macroalgae, while large scale biogeography has more of an influence. Within shores, assemblages were also strongly influenced by smaller-scale factors such as differences in the structure and species of alga. This study indicates the importance of investigating patterns across a range of spatial scales to gain a comprehensive understanding of factors influencing intertidal organisms.
- Full Text:
- Date Issued: 2011
Systematics, morphology, phylogeny and historical biogeography of the Mayfly family Prosopistomatidae (Ephemeroptera: Insecta) of the world
- Barber-James, Helen Margaret
- Authors: Barber-James, Helen Margaret
- Date: 2011
- Subjects: Mayflies Mayflies -- Classification Mayflies -- Morphology Mayflies -- Phylogeny Mayflies -- Geographical distribution Ephemeridae
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5785 , http://hdl.handle.net/10962/d1005473
- Description: The diversity, classification and historical biogeography of the mayfly family Prosopistomatidae are explored. First, the higher classification of the Ephemeroptera is reviewed, focussing on the phylogenetic placement of the Prosopistomatidae relative to other mayfly families. All relevant literature from 1762 to 2010 is synthesized. Baetiscidae are established as the probable sister lineage of Prosopistomatidae, the two constituting the superfamily Baetiscoidea. Next, qualitative morphological variation within the Prosopistomatidae is reviewed and revised, emphasizing nymphs because imaginal specimens are few. The labium and associated structures and the hypopharynx of nymphs, and the highly-derived wing venation of the imaginal stages, are re-interpreted. The structure of the male tarsal claws changes considerably between subimago and imago, which, together with deeply scalloped ridges on male imaginal forelegs and unusual pits on the female thorax, are interpreted as providing an unusual mating mechanism. These structures provide morphological characters for species definition and phylogenetic analyses. Two approaches to species delimitation are explored. First, morphometric variation is analysed using Principal Component Analysis, revealing groupings that can be interpreted as species, although there is some overlap between them. Discriminant Function Analysis shows that head width and carapace shape have the most value in identifying nymphs of different species. The carapace of Prosopistoma nymphs is shown to grow allometrically and gradually, in contrast with that of Baetisca, indicating a difference in early ontogeny. Second, an Artificial Neural Network algorithm applied to nymphal morphological characters accurately identified species. This computer-driven artificial intelligence method has power to provide future easy-to-use electronic identification aids. Phylogenetic analysis of nymphal morphology using the parsimony method shows two clades of Prosopistomatidae, one sharing characters with the type species, Prosopistoma variegatum and the other predominating in Africa, although also occurring in Asia; these clades are named the “P. variegatum” and “African” clades, respectively. Parsimony analysis of adult morphology supports these two clades, but supertree analysis obscures the relationships, nesting the “P. variegatum” lineage within the other clade. Preliminary molecular phylogenetic analysis of the 16S rRNA, (mitochondrial) 18S rRNA and Histone-3 genes using Bayesian Inference methods does not support the two clades shown by morphology. Instead, there is a strong relationship between the European species and one African species, with the single Asian representative being most distantly related. These results are limited by lack of fresh material, patchy taxon sampling, and problems with finding suitable primers. A molecular clock program, BEAST, calibrated using fossils, suggests divergence times for the oldest crown-group Prosopistoma clade, represented by the Asian P. wouterae, of about 131 Ma, with the youngest species, the African P. crassi, of 1.21 Ma. Stem-group relationships are analysed using parsimony analysis, focussing on wing characters of the Baetiscoidea, other extant mayfly lineages, and extinct stem-group lineages. This suggests that the Baetiscoidea diverged from main-line Ephemeroptera earlier than any other extant mayfly lineage. This approach expands upon ideas hinted at by earlier scientists. Finally, historical biogeographical analysis of the distribution of known Baetiscoidea s.s. stem-group fossils implies a once Pangean distribution of the lineage. Changing palaeo-climate, catastrophic extinction events and plate tectonic movements in relation to the distribution of crown-group species are reviewed. Other approaches to historical biogeography that build on both morphological and molecular phylogenies are used to interpret disperalist and vacarianist arguments. Distribution patterns of eight unrelated freshwater organisms which share a similar distribution pattern are compared, assuming that shared patterns indicate similar historic biogeographic processes. The distribution of recent Prosopistoma species is seen to be the product of evolution resulting from both vicariance and dispersal. In conclusion, this thesis encompasses a variety of disciplines. It successfully recognises new characters and distinguishes previously unknown species. It uses new approaches to delimiting species and known methods to determine phylogeny from several angles. The analysis of stem-group relationships offers an insight into possible early lineage splitting within Ephemeroptera. Interpretation of historical biogeography allows for both a Gondwanan origin of Prosopistomatidae, with rafting of species on the Deccan plate to Asia, and for subsequent dispersal from Asia down to Australia and across to Europe, and possibly back to Africa.
- Full Text:
- Date Issued: 2011
- Authors: Barber-James, Helen Margaret
- Date: 2011
- Subjects: Mayflies Mayflies -- Classification Mayflies -- Morphology Mayflies -- Phylogeny Mayflies -- Geographical distribution Ephemeridae
- Language: English
- Type: Thesis , Doctoral , PhD
- Identifier: vital:5785 , http://hdl.handle.net/10962/d1005473
- Description: The diversity, classification and historical biogeography of the mayfly family Prosopistomatidae are explored. First, the higher classification of the Ephemeroptera is reviewed, focussing on the phylogenetic placement of the Prosopistomatidae relative to other mayfly families. All relevant literature from 1762 to 2010 is synthesized. Baetiscidae are established as the probable sister lineage of Prosopistomatidae, the two constituting the superfamily Baetiscoidea. Next, qualitative morphological variation within the Prosopistomatidae is reviewed and revised, emphasizing nymphs because imaginal specimens are few. The labium and associated structures and the hypopharynx of nymphs, and the highly-derived wing venation of the imaginal stages, are re-interpreted. The structure of the male tarsal claws changes considerably between subimago and imago, which, together with deeply scalloped ridges on male imaginal forelegs and unusual pits on the female thorax, are interpreted as providing an unusual mating mechanism. These structures provide morphological characters for species definition and phylogenetic analyses. Two approaches to species delimitation are explored. First, morphometric variation is analysed using Principal Component Analysis, revealing groupings that can be interpreted as species, although there is some overlap between them. Discriminant Function Analysis shows that head width and carapace shape have the most value in identifying nymphs of different species. The carapace of Prosopistoma nymphs is shown to grow allometrically and gradually, in contrast with that of Baetisca, indicating a difference in early ontogeny. Second, an Artificial Neural Network algorithm applied to nymphal morphological characters accurately identified species. This computer-driven artificial intelligence method has power to provide future easy-to-use electronic identification aids. Phylogenetic analysis of nymphal morphology using the parsimony method shows two clades of Prosopistomatidae, one sharing characters with the type species, Prosopistoma variegatum and the other predominating in Africa, although also occurring in Asia; these clades are named the “P. variegatum” and “African” clades, respectively. Parsimony analysis of adult morphology supports these two clades, but supertree analysis obscures the relationships, nesting the “P. variegatum” lineage within the other clade. Preliminary molecular phylogenetic analysis of the 16S rRNA, (mitochondrial) 18S rRNA and Histone-3 genes using Bayesian Inference methods does not support the two clades shown by morphology. Instead, there is a strong relationship between the European species and one African species, with the single Asian representative being most distantly related. These results are limited by lack of fresh material, patchy taxon sampling, and problems with finding suitable primers. A molecular clock program, BEAST, calibrated using fossils, suggests divergence times for the oldest crown-group Prosopistoma clade, represented by the Asian P. wouterae, of about 131 Ma, with the youngest species, the African P. crassi, of 1.21 Ma. Stem-group relationships are analysed using parsimony analysis, focussing on wing characters of the Baetiscoidea, other extant mayfly lineages, and extinct stem-group lineages. This suggests that the Baetiscoidea diverged from main-line Ephemeroptera earlier than any other extant mayfly lineage. This approach expands upon ideas hinted at by earlier scientists. Finally, historical biogeographical analysis of the distribution of known Baetiscoidea s.s. stem-group fossils implies a once Pangean distribution of the lineage. Changing palaeo-climate, catastrophic extinction events and plate tectonic movements in relation to the distribution of crown-group species are reviewed. Other approaches to historical biogeography that build on both morphological and molecular phylogenies are used to interpret disperalist and vacarianist arguments. Distribution patterns of eight unrelated freshwater organisms which share a similar distribution pattern are compared, assuming that shared patterns indicate similar historic biogeographic processes. The distribution of recent Prosopistoma species is seen to be the product of evolution resulting from both vicariance and dispersal. In conclusion, this thesis encompasses a variety of disciplines. It successfully recognises new characters and distinguishes previously unknown species. It uses new approaches to delimiting species and known methods to determine phylogeny from several angles. The analysis of stem-group relationships offers an insight into possible early lineage splitting within Ephemeroptera. Interpretation of historical biogeography allows for both a Gondwanan origin of Prosopistomatidae, with rafting of species on the Deccan plate to Asia, and for subsequent dispersal from Asia down to Australia and across to Europe, and possibly back to Africa.
- Full Text:
- Date Issued: 2011
Testing the existence and direction of "spill-over" of mussel recruits beyond the boundaries of marine protected areas
- Authors: Ludford, Adam
- Date: 2011
- Subjects: Marine parks and reserves -- South Africa -- Transkei , Marine resources conservation -- South Africa -- Transkei , Mussels -- Ecology -- South Africa -- Transkei , Mexilhao mussel -- Reproduction -- South Africa -- Transkei , Mexilhao mussel -- Behavior -- South Africa -- Transkei
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5786 , http://hdl.handle.net/10962/d1005474 , Marine parks and reserves -- South Africa -- Transkei , Marine resources conservation -- South Africa -- Transkei , Mussels -- Ecology -- South Africa -- Transkei , Mexilhao mussel -- Reproduction -- South Africa -- Transkei , Mexilhao mussel -- Behavior -- South Africa -- Transkei
- Description: Landscape ecology helps in predicting the influence of habitat fragmentation on populations. Marine protected areas (MPAs) are expected to create areas of good quality patches and so improve connectivity among shores. MPAs are believed not only to protect adult populations, but also to enhance recruitment both within MPAs and on surrounding exploited shores, therefore improving their ability to recover from overexploitation. As such, MPAs are a preferred management tool for the conservation of natural populations. Although MPAs have been demonstrated to enhance adult abundances, little work has been done on their ability to provide so called "spill-over" of recruits nor has the generality of the influence of MPAs been investigated in a single region with multiple control sites. The Transkei region, on the east coast of South Africa, and the intertidal mussel, Perna perna, offer an ideal system to test the generality of the influence of MPAs on surrounding shores, due to the presence of multiple MPAs and exploited control sites. Patterns of adult abundance were surveyed at four MPAs and two comparably sized exploited control sites. Adult abundances were, in general, found to be higher within MPAs than at exploited control sites, with adult abundances decreasing towards the edge of MPAs and decreasing even more on the outside shores. To simplify the sorting procedure for samples of mussel recruits, a new method using fractionated elutriation was devised and tested. This new method was found to be more accurate, although not statistically significant but also substantially more time consuming. The increase in accuracy although not statistically significant could be biologically significant, especially when looking at low numbers. This new method could, therefore, be very useful especially when [...] is low. Recruitment was estimated over three months during the main reproductive season at two of the MPAs and at appropriate control sites. I predicted that recruitment patterns would mirror the patterns found in adult abundances and that there would be directionality in patterns of recruitment, with northern sites having greater recruitment due to the direction of near-shore ocean currents. Contrary to this, there were no correlations between adult abundance and recruitment for any of the months or sites, with no clear spatial pattern of recruitment in any of the three months. There was, however, a slight trend of greater recruitment at northern sites. To explain the lack of consistency in recruitment and adult abundances, wind data were used to examine the near-shore surface currents in this area, with theoretical surface currents showing similar patterns to those observed for recruitment. From a landscape perspective, the good patches created by MPAs supply recruits to the surrounding matrix but the low quality of habitat in the matrix prevents rehabilitation. The quality of the matrix must therefore be first improved by reseeding these shores. These results emphasise that while MPAs may function in protecting adult abundances, their influence on supplying recruits and hence recovery of near-by exploited shores may be overestimated. This lack of influence on near-by exploited shores highlights the need for reseeding of shores in conjunction with suitable management plans.
- Full Text:
- Date Issued: 2011
- Authors: Ludford, Adam
- Date: 2011
- Subjects: Marine parks and reserves -- South Africa -- Transkei , Marine resources conservation -- South Africa -- Transkei , Mussels -- Ecology -- South Africa -- Transkei , Mexilhao mussel -- Reproduction -- South Africa -- Transkei , Mexilhao mussel -- Behavior -- South Africa -- Transkei
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5786 , http://hdl.handle.net/10962/d1005474 , Marine parks and reserves -- South Africa -- Transkei , Marine resources conservation -- South Africa -- Transkei , Mussels -- Ecology -- South Africa -- Transkei , Mexilhao mussel -- Reproduction -- South Africa -- Transkei , Mexilhao mussel -- Behavior -- South Africa -- Transkei
- Description: Landscape ecology helps in predicting the influence of habitat fragmentation on populations. Marine protected areas (MPAs) are expected to create areas of good quality patches and so improve connectivity among shores. MPAs are believed not only to protect adult populations, but also to enhance recruitment both within MPAs and on surrounding exploited shores, therefore improving their ability to recover from overexploitation. As such, MPAs are a preferred management tool for the conservation of natural populations. Although MPAs have been demonstrated to enhance adult abundances, little work has been done on their ability to provide so called "spill-over" of recruits nor has the generality of the influence of MPAs been investigated in a single region with multiple control sites. The Transkei region, on the east coast of South Africa, and the intertidal mussel, Perna perna, offer an ideal system to test the generality of the influence of MPAs on surrounding shores, due to the presence of multiple MPAs and exploited control sites. Patterns of adult abundance were surveyed at four MPAs and two comparably sized exploited control sites. Adult abundances were, in general, found to be higher within MPAs than at exploited control sites, with adult abundances decreasing towards the edge of MPAs and decreasing even more on the outside shores. To simplify the sorting procedure for samples of mussel recruits, a new method using fractionated elutriation was devised and tested. This new method was found to be more accurate, although not statistically significant but also substantially more time consuming. The increase in accuracy although not statistically significant could be biologically significant, especially when looking at low numbers. This new method could, therefore, be very useful especially when [...] is low. Recruitment was estimated over three months during the main reproductive season at two of the MPAs and at appropriate control sites. I predicted that recruitment patterns would mirror the patterns found in adult abundances and that there would be directionality in patterns of recruitment, with northern sites having greater recruitment due to the direction of near-shore ocean currents. Contrary to this, there were no correlations between adult abundance and recruitment for any of the months or sites, with no clear spatial pattern of recruitment in any of the three months. There was, however, a slight trend of greater recruitment at northern sites. To explain the lack of consistency in recruitment and adult abundances, wind data were used to examine the near-shore surface currents in this area, with theoretical surface currents showing similar patterns to those observed for recruitment. From a landscape perspective, the good patches created by MPAs supply recruits to the surrounding matrix but the low quality of habitat in the matrix prevents rehabilitation. The quality of the matrix must therefore be first improved by reseeding these shores. These results emphasise that while MPAs may function in protecting adult abundances, their influence on supplying recruits and hence recovery of near-by exploited shores may be overestimated. This lack of influence on near-by exploited shores highlights the need for reseeding of shores in conjunction with suitable management plans.
- Full Text:
- Date Issued: 2011
The demography and population dynamics of a re-introduced black rhinoceros population on the Great Fish River Reserve, Eastern Cape Province
- Authors: Fike, Bradley Robin
- Date: 2011
- Subjects: Black rhinoceros -- South Africa -- Great Fish River Valley , Population biology -- South Africa -- Great Fish River Valley , Black rhinoceros -- Habitat -- South Africa -- Great Fish River Valley , Black rhinoceros -- Adaptation -- South Africa -- Great Fish River Valley , Black rhinoceros -- Ecology -- South Africa -- Great Fish River Valley
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5948 , http://hdl.handle.net/10962/d1020869
- Description: The re-introduction of black rhinoceros onto the Great Fish River Reserve in the Eastern Cape, following the species absence for over a century, created an opportunity to study this species in the thicket biome, and in particular the succulent thicket of the Great Fish River valley. The thicket biome is quite different from the habitats in which other extant populations of these animals are found and where studies of their demography have been undertaken. Data collection occurred from May 1986, with the arrival of the first four animals to December 2008, when the population was estimated to be 144 individuals. A variety of monitoring techniques were used including direct ground observations, aerial helicopter census, aerial monitoring by microlight aircraft, camera traps and opportunistic observations, each with its own advantages and disadvantages. The combination of methods and effort has resulted in the population being recognized as completely known with up to 97% of the animals being located at least once per year with a mean frequency of sightings of 11.5 per animal per year. In 2008, the population was about 20% juvenile, 36% sub-adult and 44% adult with a female biased sex ratio of 1.3 females per male. Mean age at first birth was about 80 months and this increased significantly with increasing density of black rhinoceroses. Mean intercalf interval was about 28 months and 41% of adult females gave birth each year. Mortality rates were low for juveniles, higher for sub-adults and higher for males than females. There was a weak but significant positive effect of density on male mortality. Population growth rate was about 10% and was not significantly affected by density. These results suggest that this population is beginning to show the first indications of density dependant constraints and that harvesting should be implemented in order to maintain the productive tempo. A secondary goal of the Management Plan will then be realized as the population functions as a donor to establish founder populations elsewhere within the Diceros bicornis minor range.
- Full Text:
- Date Issued: 2011
- Authors: Fike, Bradley Robin
- Date: 2011
- Subjects: Black rhinoceros -- South Africa -- Great Fish River Valley , Population biology -- South Africa -- Great Fish River Valley , Black rhinoceros -- Habitat -- South Africa -- Great Fish River Valley , Black rhinoceros -- Adaptation -- South Africa -- Great Fish River Valley , Black rhinoceros -- Ecology -- South Africa -- Great Fish River Valley
- Language: English
- Type: Thesis , Masters , MSc
- Identifier: vital:5948 , http://hdl.handle.net/10962/d1020869
- Description: The re-introduction of black rhinoceros onto the Great Fish River Reserve in the Eastern Cape, following the species absence for over a century, created an opportunity to study this species in the thicket biome, and in particular the succulent thicket of the Great Fish River valley. The thicket biome is quite different from the habitats in which other extant populations of these animals are found and where studies of their demography have been undertaken. Data collection occurred from May 1986, with the arrival of the first four animals to December 2008, when the population was estimated to be 144 individuals. A variety of monitoring techniques were used including direct ground observations, aerial helicopter census, aerial monitoring by microlight aircraft, camera traps and opportunistic observations, each with its own advantages and disadvantages. The combination of methods and effort has resulted in the population being recognized as completely known with up to 97% of the animals being located at least once per year with a mean frequency of sightings of 11.5 per animal per year. In 2008, the population was about 20% juvenile, 36% sub-adult and 44% adult with a female biased sex ratio of 1.3 females per male. Mean age at first birth was about 80 months and this increased significantly with increasing density of black rhinoceroses. Mean intercalf interval was about 28 months and 41% of adult females gave birth each year. Mortality rates were low for juveniles, higher for sub-adults and higher for males than females. There was a weak but significant positive effect of density on male mortality. Population growth rate was about 10% and was not significantly affected by density. These results suggest that this population is beginning to show the first indications of density dependant constraints and that harvesting should be implemented in order to maintain the productive tempo. A secondary goal of the Management Plan will then be realized as the population functions as a donor to establish founder populations elsewhere within the Diceros bicornis minor range.
- Full Text:
- Date Issued: 2011