Intraspecific mitochondrial gene variation can be as low as that of nuclear rRNA:
- Matumba, Tshifhiwa G, Oliver, Jody, Barker, Nigel P, McQuaid, Christopher D, Teske, Peter R
- Authors: Matumba, Tshifhiwa G , Oliver, Jody , Barker, Nigel P , McQuaid, Christopher D , Teske, Peter R
- Date: 2020
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/160401 , vital:40442 , https://doi.org/10.12688/f1000research.23635.2
- Description: Mitochondrial DNA (mtDNA) has long been used to date historical demographic events. The idea that it is useful for molecular dating rests on the premise that its evolution is neutral. Even though this idea has long been challenged, the evidence against clock-like evolution of mtDNA is often ignored. Here, we present a particularly clear and simple example to illustrate the implications of violations of the assumption of selective neutrality.
- Full Text:
- Date Issued: 2020
- Authors: Matumba, Tshifhiwa G , Oliver, Jody , Barker, Nigel P , McQuaid, Christopher D , Teske, Peter R
- Date: 2020
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/160401 , vital:40442 , https://doi.org/10.12688/f1000research.23635.2
- Description: Mitochondrial DNA (mtDNA) has long been used to date historical demographic events. The idea that it is useful for molecular dating rests on the premise that its evolution is neutral. Even though this idea has long been challenged, the evidence against clock-like evolution of mtDNA is often ignored. Here, we present a particularly clear and simple example to illustrate the implications of violations of the assumption of selective neutrality.
- Full Text:
- Date Issued: 2020
Microplastic leachates induce species-specific trait strengthening in intertidal mussels:
- Seuront, Laurent, Nicastro, Katy, McQuaid, Christopher D, Zardi, Gerardo I
- Authors: Seuront, Laurent , Nicastro, Katy , McQuaid, Christopher D , Zardi, Gerardo I
- Date: 2020
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/158200 , vital:40162 , https://0-doi.org.wam.seals.ac.za/10.1002/eap.2222. https://doi.org/10.5061/dryad.905qftthq
- Description: Plastic pollution is ubiquitous with increasing recognition of its direct effects on species’ fitness. Little is known, however, about its more subtle effects, including the influence of plastic pollution on the morphological, functional and behavioural traits of organisms that are central to their ability to withstand disturbances. Among the least obvious but most pernicious forms of plastic-associated pollution are the chemicals that leach from microplastics. Here, we investigate how such leachates influence species’ traits by assessing functional trait compensation across four species of intertidal mussels, through investigations of byssal thread production, movement and aggregation behaviour for mussels held in natural seawater or seawater contaminated by microplastic leachates.
- Full Text:
- Date Issued: 2020
- Authors: Seuront, Laurent , Nicastro, Katy , McQuaid, Christopher D , Zardi, Gerardo I
- Date: 2020
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/158200 , vital:40162 , https://0-doi.org.wam.seals.ac.za/10.1002/eap.2222. https://doi.org/10.5061/dryad.905qftthq
- Description: Plastic pollution is ubiquitous with increasing recognition of its direct effects on species’ fitness. Little is known, however, about its more subtle effects, including the influence of plastic pollution on the morphological, functional and behavioural traits of organisms that are central to their ability to withstand disturbances. Among the least obvious but most pernicious forms of plastic-associated pollution are the chemicals that leach from microplastics. Here, we investigate how such leachates influence species’ traits by assessing functional trait compensation across four species of intertidal mussels, through investigations of byssal thread production, movement and aggregation behaviour for mussels held in natural seawater or seawater contaminated by microplastic leachates.
- Full Text:
- Date Issued: 2020
Small scale habitat effects on anthropogenic litter material and sources in a coastal lagoon system:
- Velez, Nadja, Nicastro, Katy R, McQuaid, Christopher D, Zardi, Gerardi I
- Authors: Velez, Nadja , Nicastro, Katy R , McQuaid, Christopher D , Zardi, Gerardi I
- Date: 2020
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/160489 , vital:40450 , https://doi.org/10.1016/j.marpolbul.2020.111689
- Description: Anthropogenic litter is ubiquitous throughout marine ecosystems, but its abundance and distribution are driven by complex interactions of distinct environmental factors and thus can be extremely heterogeneous. Here we compare the extent of anthropogenic litter pollution at a sheltered lagoon habitat and nearby open coast sites. Monthly surveys over a period of five months showed that both the types and sources of litter always differed significantly between lagoon and open coast sites.
- Full Text:
- Date Issued: 2020
Small scale habitat effects on anthropogenic litter material and sources in a coastal lagoon system:
- Authors: Velez, Nadja , Nicastro, Katy R , McQuaid, Christopher D , Zardi, Gerardi I
- Date: 2020
- Language: English
- Type: text , article
- Identifier: http://hdl.handle.net/10962/160489 , vital:40450 , https://doi.org/10.1016/j.marpolbul.2020.111689
- Description: Anthropogenic litter is ubiquitous throughout marine ecosystems, but its abundance and distribution are driven by complex interactions of distinct environmental factors and thus can be extremely heterogeneous. Here we compare the extent of anthropogenic litter pollution at a sheltered lagoon habitat and nearby open coast sites. Monthly surveys over a period of five months showed that both the types and sources of litter always differed significantly between lagoon and open coast sites.
- Full Text:
- Date Issued: 2020
Evidence for rangewide panmixia despite multiple barriers to dispersal in a marine mussel
- Lourenço, Carla R, Nicastro, Katy R, McQuaid, Christopher D, Chefaoui, Rosa M, Assis, Jorge, Taleb, Mohammed Z, Zardi, Gerardo I
- Authors: Lourenço, Carla R , Nicastro, Katy R , McQuaid, Christopher D , Chefaoui, Rosa M , Assis, Jorge , Taleb, Mohammed Z , Zardi, Gerardo I
- Date: 2017
- Language: English
- Type: article , text
- Identifier: http://hdl.handle.net/10962/59952 , vital:27714 , doi:10.1038/s41598-017-10753-9
- Description: Oceanographic features shape the distributional and genetic patterns of marine species by interrupting or promoting connections among populations. Although general patterns commonly arise, distributional ranges and genetic structure are species-specific and do not always comply with the expected trends. By applying a multimarker genetic approach combined with Lagrangian particle simulations (LPS) we tested the hypothesis that oceanographic features along northeastern Atlantic and Mediterranean shores influence dispersal potential and genetic structure of the intertidal mussel Perna perna. Additionally, by performing environmental niche modelling we assessed the potential and realized niche of P. perna along its entire native distributional range and the environmental factors that best explain its realized distribution. Perna perna showed evidence of panmixia across 4,000 km despite several oceanographic breaking points detected by LPS. This is probably the result of a combination of life history traits, continuous habitat availability and stepping-stone dynamics. Moreover, the niche modelling framework depicted minimum sea surface temperatures (SST) as the major factor shaping P. perna distributional range limits along its native areas. Forthcoming warming SST is expected to further change these limits and allow the species to expand its range polewards though this may be accompanied by retreat from warmer areas.
- Full Text:
- Date Issued: 2017
- Authors: Lourenço, Carla R , Nicastro, Katy R , McQuaid, Christopher D , Chefaoui, Rosa M , Assis, Jorge , Taleb, Mohammed Z , Zardi, Gerardo I
- Date: 2017
- Language: English
- Type: article , text
- Identifier: http://hdl.handle.net/10962/59952 , vital:27714 , doi:10.1038/s41598-017-10753-9
- Description: Oceanographic features shape the distributional and genetic patterns of marine species by interrupting or promoting connections among populations. Although general patterns commonly arise, distributional ranges and genetic structure are species-specific and do not always comply with the expected trends. By applying a multimarker genetic approach combined with Lagrangian particle simulations (LPS) we tested the hypothesis that oceanographic features along northeastern Atlantic and Mediterranean shores influence dispersal potential and genetic structure of the intertidal mussel Perna perna. Additionally, by performing environmental niche modelling we assessed the potential and realized niche of P. perna along its entire native distributional range and the environmental factors that best explain its realized distribution. Perna perna showed evidence of panmixia across 4,000 km despite several oceanographic breaking points detected by LPS. This is probably the result of a combination of life history traits, continuous habitat availability and stepping-stone dynamics. Moreover, the niche modelling framework depicted minimum sea surface temperatures (SST) as the major factor shaping P. perna distributional range limits along its native areas. Forthcoming warming SST is expected to further change these limits and allow the species to expand its range polewards though this may be accompanied by retreat from warmer areas.
- Full Text:
- Date Issued: 2017
Biogeographical boundaries, functional group structure and diversity of rocky shore communities along the Argentinean coast
- Wieters, Evie A, McQuaid, Christopher D, Palomo, Gabriela, Pappalardo, Paula
- Authors: Wieters, Evie A , McQuaid, Christopher D , Palomo, Gabriela , Pappalardo, Paula
- Date: 2013
- Language: English
- Type: Article
- Identifier: vital:6835 , http://hdl.handle.net/10962/d1010956
- Description: We investigate the extent to which functional structure and spatial variability of intertidal communities coincide with major biogeographical boundaries, areas where extensive compositional changes in the biota are observed over a limited geographic extension. We then investigate whether spatial variation in the biomass of functional groups, over geographic (10′s km) and local (10′s m) scales, could be associated to species diversity within and among these groups. Functional community structure expressed as abundance (density, cover and biomass) and composition of major functional groups was quantified through field surveys at 20 rocky intertidal shores spanning six degrees of latitude along the southwest Atlantic coast of Argentina and extending across the boundaries between the Argentinean and Magellanic Provinces. Patterns of abundance of individual functional groups were not uniformly matched with biogeographical regions. Only ephemeral algae showed an abrupt geographical discontinuity coincident with changes in biogeographic boundaries, and this was limited to the mid intertidal zone. We identified 3–4 main ‘groups’ of sites in terms of the total and relative abundance of the major functional groups, but these did not coincide with biogeographical boundaries, nor did they follow latitudinal arrangement. Thus, processes that determine the functional structure of these intertidal communities are insensitive to biogeographical boundaries. Over both geographical and local spatial scales, and for most functional groups and tidal levels, increases in species richness within the functional group was significantly associated to increased total biomass and reduced spatial variability of the group. These results suggest that species belonging to the same functional group are sufficiently uncorrelated over space (i.e. metres and site-to-site ) to stabilize patterns of biomass variability and, in this manner, provide a buffer, or “insurance”, against spatial variability in environmental conditions.
- Full Text:
- Date Issued: 2013
- Authors: Wieters, Evie A , McQuaid, Christopher D , Palomo, Gabriela , Pappalardo, Paula
- Date: 2013
- Language: English
- Type: Article
- Identifier: vital:6835 , http://hdl.handle.net/10962/d1010956
- Description: We investigate the extent to which functional structure and spatial variability of intertidal communities coincide with major biogeographical boundaries, areas where extensive compositional changes in the biota are observed over a limited geographic extension. We then investigate whether spatial variation in the biomass of functional groups, over geographic (10′s km) and local (10′s m) scales, could be associated to species diversity within and among these groups. Functional community structure expressed as abundance (density, cover and biomass) and composition of major functional groups was quantified through field surveys at 20 rocky intertidal shores spanning six degrees of latitude along the southwest Atlantic coast of Argentina and extending across the boundaries between the Argentinean and Magellanic Provinces. Patterns of abundance of individual functional groups were not uniformly matched with biogeographical regions. Only ephemeral algae showed an abrupt geographical discontinuity coincident with changes in biogeographic boundaries, and this was limited to the mid intertidal zone. We identified 3–4 main ‘groups’ of sites in terms of the total and relative abundance of the major functional groups, but these did not coincide with biogeographical boundaries, nor did they follow latitudinal arrangement. Thus, processes that determine the functional structure of these intertidal communities are insensitive to biogeographical boundaries. Over both geographical and local spatial scales, and for most functional groups and tidal levels, increases in species richness within the functional group was significantly associated to increased total biomass and reduced spatial variability of the group. These results suggest that species belonging to the same functional group are sufficiently uncorrelated over space (i.e. metres and site-to-site ) to stabilize patterns of biomass variability and, in this manner, provide a buffer, or “insurance”, against spatial variability in environmental conditions.
- Full Text:
- Date Issued: 2013
Environmental domains and range-limiting mechanisms: testing the Abundant Centre Hypothesis using southern African sandhoppers
- Baldanzi, Simone, McQuaid, Christopher D, Cannicci, Stefano, Porri, Francesca
- Authors: Baldanzi, Simone , McQuaid, Christopher D , Cannicci, Stefano , Porri, Francesca
- Date: 2013
- Language: English
- Type: Article
- Identifier: vital:6848 , http://hdl.handle.net/10962/d1011108
- Description: Predicting shifts of species geographical ranges is a fundamental challenge for conservation ecologists given the great complexity of factors involved in setting range limits. Distributional patterns are frequently modelled to “simplify” species responses to the environment, yet the central mechanisms that drive a particular pattern are rarely understood. We evaluated the distributions of two sandhopper species (Crustacea, Amphipoda, Talitridae), Talorchestia capensis and Africorchestia quadrispinosa along the Namibian and South African coasts, encompassing three biogeographic regions influenced by two different oceanographic systems, the Benguela and Agulhas currents. We aimed to test whether the Abundant Centre Hypothesis (ACH) can explain the distributions of these species’ abundances, sizes and sex ratios and examined which environmental parameters influence/drive these distributions. Animals were collected during a once-off survey at 29 sites over c.3500 km of coastline. The ACH was tested using a non-parametric constraint space analysis of the goodness of fit of five hypothetical models. Distance Based Linear Modelling (DistLM) was performed to evaluate which environmental traits influenced the distribution data. Abundance, size and sex ratio showed different patterns of distribution. A ramped model fitted the abundance (Ramped North) and size (Ramped South) distribution for A. quadrispinosa. The Inverse Quadratic model fitted the size distribution of T. capensis. Beach slope, salinity, sand temperature and percentage of detritus found on the shore at the time of collection played important roles in driving the abundance of A. quadrispinosa. T. capensis was mainly affected by salinity and the morphodynamic state of the beach. Our results provided only some support for the ACH predictions. The DistLM confirmed that the physical state of the beach is an important factor for sandy beach organisms. The effect of salinity and temperature suggest metabolic responses to local conditions and a role in small to mesoscale shifts in the range of these populations.
- Full Text:
- Date Issued: 2013
- Authors: Baldanzi, Simone , McQuaid, Christopher D , Cannicci, Stefano , Porri, Francesca
- Date: 2013
- Language: English
- Type: Article
- Identifier: vital:6848 , http://hdl.handle.net/10962/d1011108
- Description: Predicting shifts of species geographical ranges is a fundamental challenge for conservation ecologists given the great complexity of factors involved in setting range limits. Distributional patterns are frequently modelled to “simplify” species responses to the environment, yet the central mechanisms that drive a particular pattern are rarely understood. We evaluated the distributions of two sandhopper species (Crustacea, Amphipoda, Talitridae), Talorchestia capensis and Africorchestia quadrispinosa along the Namibian and South African coasts, encompassing three biogeographic regions influenced by two different oceanographic systems, the Benguela and Agulhas currents. We aimed to test whether the Abundant Centre Hypothesis (ACH) can explain the distributions of these species’ abundances, sizes and sex ratios and examined which environmental parameters influence/drive these distributions. Animals were collected during a once-off survey at 29 sites over c.3500 km of coastline. The ACH was tested using a non-parametric constraint space analysis of the goodness of fit of five hypothetical models. Distance Based Linear Modelling (DistLM) was performed to evaluate which environmental traits influenced the distribution data. Abundance, size and sex ratio showed different patterns of distribution. A ramped model fitted the abundance (Ramped North) and size (Ramped South) distribution for A. quadrispinosa. The Inverse Quadratic model fitted the size distribution of T. capensis. Beach slope, salinity, sand temperature and percentage of detritus found on the shore at the time of collection played important roles in driving the abundance of A. quadrispinosa. T. capensis was mainly affected by salinity and the morphodynamic state of the beach. Our results provided only some support for the ACH predictions. The DistLM confirmed that the physical state of the beach is an important factor for sandy beach organisms. The effect of salinity and temperature suggest metabolic responses to local conditions and a role in small to mesoscale shifts in the range of these populations.
- Full Text:
- Date Issued: 2013
Effects of patch-size on populations of intertidal limpets, Siphonaria spp., in a linear landscape
- Cole, Victoria J, Johnson, Linda G, McQuaid, Christopher D
- Authors: Cole, Victoria J , Johnson, Linda G , McQuaid, Christopher D
- Date: 2012
- Language: English
- Type: Article
- Identifier: vital:6845 , http://hdl.handle.net/10962/d1011050
- Description: Organisms with different life-histories and abilities to disperse often utilise habitat patches in different ways. We investigated the influence of the size of patches of rock (separated by stretches of sand) on the density of pulmonate limpets (Siphonaria spp.) along 1500 km of the linear landscape of the South African coastline. We compared the influence of patch-size on two congeneric species with different modes of development, S. serrata a direct developer, and S. concinna a planktonic developer. We tested the spatial and temporal consistency of the effects of patch-size by sampling 7 independent regions spanning the distributional range of both species of limpets, and by sampling one region at monthly intervals for 1 year. Within each region or month, 4 small patches (<20 m in length) interspersed with the 4 large patches (>60 m in length) were sampled. Across the entire geographic range and throughout the year, there were more of both species of limpets in large patches than in small patches. In most regions, there was greater variability in large patches than small patches. Variability within patches in a single region was similar throughout the year, with greater variability of both species in large than in small patches. We found little influence of the mode of development on the response of limpets to patch-size. Our findings highlight the importance of understanding patterns of distribution of species with respect to habitat heterogeneity in linear landscapes, and contradict the idea that organism mobility at an early ontogenetic stage directly affects habitat use.
- Full Text:
- Date Issued: 2012
- Authors: Cole, Victoria J , Johnson, Linda G , McQuaid, Christopher D
- Date: 2012
- Language: English
- Type: Article
- Identifier: vital:6845 , http://hdl.handle.net/10962/d1011050
- Description: Organisms with different life-histories and abilities to disperse often utilise habitat patches in different ways. We investigated the influence of the size of patches of rock (separated by stretches of sand) on the density of pulmonate limpets (Siphonaria spp.) along 1500 km of the linear landscape of the South African coastline. We compared the influence of patch-size on two congeneric species with different modes of development, S. serrata a direct developer, and S. concinna a planktonic developer. We tested the spatial and temporal consistency of the effects of patch-size by sampling 7 independent regions spanning the distributional range of both species of limpets, and by sampling one region at monthly intervals for 1 year. Within each region or month, 4 small patches (<20 m in length) interspersed with the 4 large patches (>60 m in length) were sampled. Across the entire geographic range and throughout the year, there were more of both species of limpets in large patches than in small patches. In most regions, there was greater variability in large patches than small patches. Variability within patches in a single region was similar throughout the year, with greater variability of both species in large than in small patches. We found little influence of the mode of development on the response of limpets to patch-size. Our findings highlight the importance of understanding patterns of distribution of species with respect to habitat heterogeneity in linear landscapes, and contradict the idea that organism mobility at an early ontogenetic stage directly affects habitat use.
- Full Text:
- Date Issued: 2012
Love thy neighbour : group properties of gaping behaviour in mussel aggregations
- Nicastro, Katy R, Zardi, Gerardo I, McQuaid, Christopher D, Pearson, Gareth A, Serrão, Ester A
- Authors: Nicastro, Katy R , Zardi, Gerardo I , McQuaid, Christopher D , Pearson, Gareth A , Serrão, Ester A
- Date: 2012
- Language: English
- Type: Article
- Identifier: vital:6841 , http://hdl.handle.net/10962/d1010991
- Description: By associating closely with others to form a group, an animal can benefit from a number of advantages including reduced risk of predation, amelioration of environmental conditions, and increased reproductive success, but at the price of reduced resources. Although made up of individual members, an aggregation often displays novel effects that do not manifest at the level of the individual organism. Here we show that very simple behaviour in intertidal mussels shows new effects in dense aggregations but not in isolated individuals. Perna perna and Mytilus galloprovincialis are gaping (periodic valve movement during emersion) and non-gaping mussels respectively. P. perna gaping behaviour had no effect on body temperatures of isolated individuals, while it led to increased humidity and decreased temperatures in dense groups (beds). Gaping resulted in cooler body temperatures for P. perna than M. galloprovincialis when in aggregations, while solitary individuals exhibited the highest temperatures. Gradients of increasing body temperature were detected from the center to edges of beds, but M. galloprovincialis at the edge had the same temperature as isolated individuals. Furthermore, a field study showed that during periods of severe heat stress, mortality rates of mussels within beds of the gaping P. perna were lower than those of isolated individuals or within beds of M. galloprovincialis, highlighting the determinant role of gaping on fitness and group functioning. We demonstrate that new effects of very simple individual behaviour lead to amelioration of abiotic conditions at the aggregation level and that these effects increase mussel resistance to thermal stress.
- Full Text:
- Date Issued: 2012
- Authors: Nicastro, Katy R , Zardi, Gerardo I , McQuaid, Christopher D , Pearson, Gareth A , Serrão, Ester A
- Date: 2012
- Language: English
- Type: Article
- Identifier: vital:6841 , http://hdl.handle.net/10962/d1010991
- Description: By associating closely with others to form a group, an animal can benefit from a number of advantages including reduced risk of predation, amelioration of environmental conditions, and increased reproductive success, but at the price of reduced resources. Although made up of individual members, an aggregation often displays novel effects that do not manifest at the level of the individual organism. Here we show that very simple behaviour in intertidal mussels shows new effects in dense aggregations but not in isolated individuals. Perna perna and Mytilus galloprovincialis are gaping (periodic valve movement during emersion) and non-gaping mussels respectively. P. perna gaping behaviour had no effect on body temperatures of isolated individuals, while it led to increased humidity and decreased temperatures in dense groups (beds). Gaping resulted in cooler body temperatures for P. perna than M. galloprovincialis when in aggregations, while solitary individuals exhibited the highest temperatures. Gradients of increasing body temperature were detected from the center to edges of beds, but M. galloprovincialis at the edge had the same temperature as isolated individuals. Furthermore, a field study showed that during periods of severe heat stress, mortality rates of mussels within beds of the gaping P. perna were lower than those of isolated individuals or within beds of M. galloprovincialis, highlighting the determinant role of gaping on fitness and group functioning. We demonstrate that new effects of very simple individual behaviour lead to amelioration of abiotic conditions at the aggregation level and that these effects increase mussel resistance to thermal stress.
- Full Text:
- Date Issued: 2012
Mitochondrial DNA paradox: sex-specific genetic structure in a marine mussel despite maternal inheritance and passive dispersal
- Teske, Peter R, Papadopoulos, Isabelle, Barker, Nigel P, McQuaid, Christopher D
- Authors: Teske, Peter R , Papadopoulos, Isabelle , Barker, Nigel P , McQuaid, Christopher D
- Date: 2012
- Language: English
- Type: Article
- Identifier: vital:6836 , http://hdl.handle.net/10962/d1010959
- Description: Background: When genetic structure is identified using mitochondrial DNA (mtDNA), but no structure is identified using biparentally-inherited nuclear DNA, the discordance is often attributed to differences in dispersal potential between the sexes. Results: We sampled the intertidal rocky shore mussel Perna perna in a South African bay and along the nearby open coast, and sequenced maternally-inherited mtDNA (there is no evidence for paternally-inherited mtDNA in this species) and a biparentally-inherited marker. By treating males and females as different populations, we identified significant genetic structure on the basis of mtDNA data in the females only. Conclusions: This is the first study to report sex-specific differences in genetic structure based on matrilineally-inherited mtDNA in a passively dispersing species that lacks social structure or sexual dimorphism. The observed pattern most likely stems from females being more vulnerable to selection in habitats from which they did not originate, which also manifests itself in a male-biased sex ratio. Our results have three important implications for the interpretation of population genetic data. First, even when mtDNA is inherited exclusively in the female line, it also contains information about males. For that reason, using it to identify sex-specific differences in genetic structure by contrasting it with biparentally-inherited markers is problematic. Second, the fact that sex-specific differences were found in a passively dispersing species in which sex-biased dispersal is unlikely highlights the fact that significant genetic structure is not necessarily a function of low dispersal potential or physical barriers. Third, even though mtDNA is typically used to study historical demographic processes, it also contains information about contemporary processes. Higher survival rates of males in non-native habitats can erase the genetic structure present in their mothers within a single generation.
- Full Text:
- Date Issued: 2012
- Authors: Teske, Peter R , Papadopoulos, Isabelle , Barker, Nigel P , McQuaid, Christopher D
- Date: 2012
- Language: English
- Type: Article
- Identifier: vital:6836 , http://hdl.handle.net/10962/d1010959
- Description: Background: When genetic structure is identified using mitochondrial DNA (mtDNA), but no structure is identified using biparentally-inherited nuclear DNA, the discordance is often attributed to differences in dispersal potential between the sexes. Results: We sampled the intertidal rocky shore mussel Perna perna in a South African bay and along the nearby open coast, and sequenced maternally-inherited mtDNA (there is no evidence for paternally-inherited mtDNA in this species) and a biparentally-inherited marker. By treating males and females as different populations, we identified significant genetic structure on the basis of mtDNA data in the females only. Conclusions: This is the first study to report sex-specific differences in genetic structure based on matrilineally-inherited mtDNA in a passively dispersing species that lacks social structure or sexual dimorphism. The observed pattern most likely stems from females being more vulnerable to selection in habitats from which they did not originate, which also manifests itself in a male-biased sex ratio. Our results have three important implications for the interpretation of population genetic data. First, even when mtDNA is inherited exclusively in the female line, it also contains information about males. For that reason, using it to identify sex-specific differences in genetic structure by contrasting it with biparentally-inherited markers is problematic. Second, the fact that sex-specific differences were found in a passively dispersing species in which sex-biased dispersal is unlikely highlights the fact that significant genetic structure is not necessarily a function of low dispersal potential or physical barriers. Third, even though mtDNA is typically used to study historical demographic processes, it also contains information about contemporary processes. Higher survival rates of males in non-native habitats can erase the genetic structure present in their mothers within a single generation.
- Full Text:
- Date Issued: 2012
First oceanographic survey of the entire continental shelf adjacent to the northern Agulhas Current
- Lutjeharms, Johan R E, Durgadoo, Jonathan V, Schapira, Mathilde, McQuaid, Christopher D
- Authors: Lutjeharms, Johan R E , Durgadoo, Jonathan V , Schapira, Mathilde , McQuaid, Christopher D
- Date: 2010
- Language: English
- Type: Article
- Identifier: vital:6867 , http://hdl.handle.net/10962/d1011499 , http://www.sajs.co.za/index.php/SAJS/article/view/410
- Description: [from introduction] The Agulhas Current is by far the largest western boundary current of the southern hemisphere1 and carries about 70 × 106 m3/s of seawater past the eastern shores of South Africa.2 Being more than 2000 m deep, it follows the continental shelf edge quite closely. Its northern part, all the way downstream to Algoa Bay, has a very stable trajectory whereas the southern part meanders widely to either side of a mean geographical location,3 in the process creating shear edge eddies and attendant plumes of warm surface water over the shelf.4 However, the direct influence of the Agulhas Current on the waters and ecosystems of the adjacent shelf of South Africa remains largely unknown.
- Full Text:
- Date Issued: 2010
- Authors: Lutjeharms, Johan R E , Durgadoo, Jonathan V , Schapira, Mathilde , McQuaid, Christopher D
- Date: 2010
- Language: English
- Type: Article
- Identifier: vital:6867 , http://hdl.handle.net/10962/d1011499 , http://www.sajs.co.za/index.php/SAJS/article/view/410
- Description: [from introduction] The Agulhas Current is by far the largest western boundary current of the southern hemisphere1 and carries about 70 × 106 m3/s of seawater past the eastern shores of South Africa.2 Being more than 2000 m deep, it follows the continental shelf edge quite closely. Its northern part, all the way downstream to Algoa Bay, has a very stable trajectory whereas the southern part meanders widely to either side of a mean geographical location,3 in the process creating shear edge eddies and attendant plumes of warm surface water over the shelf.4 However, the direct influence of the Agulhas Current on the waters and ecosystems of the adjacent shelf of South Africa remains largely unknown.
- Full Text:
- Date Issued: 2010
Mechanisms of habitat segregation between an invasive (Mytilus galloprovincialis) and an indigenous (Perna perna) mussel: adult growth and mortality
- Bownes, Sarah J, McQuaid, Christopher D
- Authors: Bownes, Sarah J , McQuaid, Christopher D
- Date: 2010
- Language: English
- Type: Article
- Identifier: vital:6868 , http://hdl.handle.net/10962/d1011500
- Description: The invasive mussel Mytilus galloprovincialis and the indigenous mussel Perna perna coexist intertidally on the south coast of South Africa through partial vertical habitat segregation: M. galloprovincialis dominates the upper shore and P. perna the lower shore. Recruitment patterns can explain the zonation of P. perna, but not the invasive species. We examined the role of post-recruitment interactions by measuring spatial and temporal differences in adult growth and mortality rates of the two species. Specifically, we tested the hypothesis that interspecific differences in growth and mortality reflect adult distribution patterns. The two study locations, Plettenberg Bay and Tsitsikamma, are 70 km apart with two sites (separated by 300–400 m) per location, each divided into three vertical zones. Growth was measured seasonally using different marking methods in 2001 and 2003. Cumulative adult mortality was measured through summer in 2003/2004. Both species generally grew more slowly upshore, but they showed different effects of season. For P. perna, growth was significantly reduced in winter in the low zone, but unaffected by season in the high zone. For M. galloprovincialis, growth was either unaffected by season or increased in winter, even in the high zone. Thus, growth of P. perna and M. galloprovincialis was reduced under cool winter and warm summer temperatures, respectively; and while growth was more similar between species in summer, M. galloprovincialis grew much faster than P. perna in winter. Mortality of P. perna increased upshore. For M. galloprovincialis, mortality was not zone-dependent and was significantly greater than for P. perna on the low-shore and (generally) across the shore in Tsitsikamma. Both species had higher growth and mortality rates in Plettenberg Bay than in Tsitsikamma. Thus, P. perna seems able to maintain spatial dominance on the low-shore and at certain sites because of higher mortality of M. galloprovincialis. We conclude that seasonality in growth of the two species reflects their biogeographic affinities and that coexistence is possible through pre-recruitment effects that limit the vertical distribution of P. perna and post-recruitment effects that limit M. galloprovincialis.
- Full Text:
- Date Issued: 2010
- Authors: Bownes, Sarah J , McQuaid, Christopher D
- Date: 2010
- Language: English
- Type: Article
- Identifier: vital:6868 , http://hdl.handle.net/10962/d1011500
- Description: The invasive mussel Mytilus galloprovincialis and the indigenous mussel Perna perna coexist intertidally on the south coast of South Africa through partial vertical habitat segregation: M. galloprovincialis dominates the upper shore and P. perna the lower shore. Recruitment patterns can explain the zonation of P. perna, but not the invasive species. We examined the role of post-recruitment interactions by measuring spatial and temporal differences in adult growth and mortality rates of the two species. Specifically, we tested the hypothesis that interspecific differences in growth and mortality reflect adult distribution patterns. The two study locations, Plettenberg Bay and Tsitsikamma, are 70 km apart with two sites (separated by 300–400 m) per location, each divided into three vertical zones. Growth was measured seasonally using different marking methods in 2001 and 2003. Cumulative adult mortality was measured through summer in 2003/2004. Both species generally grew more slowly upshore, but they showed different effects of season. For P. perna, growth was significantly reduced in winter in the low zone, but unaffected by season in the high zone. For M. galloprovincialis, growth was either unaffected by season or increased in winter, even in the high zone. Thus, growth of P. perna and M. galloprovincialis was reduced under cool winter and warm summer temperatures, respectively; and while growth was more similar between species in summer, M. galloprovincialis grew much faster than P. perna in winter. Mortality of P. perna increased upshore. For M. galloprovincialis, mortality was not zone-dependent and was significantly greater than for P. perna on the low-shore and (generally) across the shore in Tsitsikamma. Both species had higher growth and mortality rates in Plettenberg Bay than in Tsitsikamma. Thus, P. perna seems able to maintain spatial dominance on the low-shore and at certain sites because of higher mortality of M. galloprovincialis. We conclude that seasonality in growth of the two species reflects their biogeographic affinities and that coexistence is possible through pre-recruitment effects that limit the vertical distribution of P. perna and post-recruitment effects that limit M. galloprovincialis.
- Full Text:
- Date Issued: 2010
Tri-locus sequence data reject a Gondwanan origin hypothesis for the African/South Pacific crab genus Hymenosoma
- Teske, Peter R, McLay, Colin L, Sandoval-Castillo, Jonathan, Papadopoulos, Isabelle, Newman, Brent K, Griffiths, Charles L, McQuaid, Christopher D, Barker, Nigel P, Borgonie, Gaetan, Beheregaray, Luciano B
- Authors: Teske, Peter R , McLay, Colin L , Sandoval-Castillo, Jonathan , Papadopoulos, Isabelle , Newman, Brent K , Griffiths, Charles L , McQuaid, Christopher D , Barker, Nigel P , Borgonie, Gaetan , Beheregaray, Luciano B
- Date: 2009
- Language: English
- Type: Article
- Identifier: vital:6547 , http://hdl.handle.net/10962/d1006003
- Description: Crabs of the family Hymenosomatidae are common in coastal and shelf regions throughout much of the southern hemisphere. One of the genera in the family, Hymenosoma, is represented in Africa and the South Pacific (Australia and New Zealand). This distribution can be explained either by vicariance (presence of the genus on the Gondwanan supercontinent and divergence following its break-up) or more recent transoceanic dispersal from one region to the other. We tested these hypotheses by reconstructing phylogenetic relationships among the seven presently-accepted species in the genus, as well as examining their placement among other hymenosomatid crabs, using sequence data from two nuclear markers (Adenine Nucleotide Transporter [ANT] exon 2 and 18S rDNA) and three mitochondrial markers (COI, 12S and 16S rDNA). The five southern African representatives of the genus were recovered as a monophyletic lineage, and another southern African species, Neorhynchoplax bovis, was identified as their sister taxon. The two species of Hymenosoma from the South Pacific neither clustered with their African congeners, nor with each other, and should therefore both be placed into different genera. Molecular dating supports a post-Gondwanan origin of the Hymenosomatidae. While long-distance dispersal cannot be ruled out to explain the presence of the family Hymenosomatidae on the former Gondwanan land-masses and beyond, the evolutionary history of the African species of Hymenosoma indicates that a third means of speciation may be important in this group: gradual along-coast dispersal from tropical towards temperate regions, with range expansions into formerly inhospitable habitat during warm climatic phases, followed by adaptation and speciation during subsequent cooler phases.
- Full Text:
- Date Issued: 2009
- Authors: Teske, Peter R , McLay, Colin L , Sandoval-Castillo, Jonathan , Papadopoulos, Isabelle , Newman, Brent K , Griffiths, Charles L , McQuaid, Christopher D , Barker, Nigel P , Borgonie, Gaetan , Beheregaray, Luciano B
- Date: 2009
- Language: English
- Type: Article
- Identifier: vital:6547 , http://hdl.handle.net/10962/d1006003
- Description: Crabs of the family Hymenosomatidae are common in coastal and shelf regions throughout much of the southern hemisphere. One of the genera in the family, Hymenosoma, is represented in Africa and the South Pacific (Australia and New Zealand). This distribution can be explained either by vicariance (presence of the genus on the Gondwanan supercontinent and divergence following its break-up) or more recent transoceanic dispersal from one region to the other. We tested these hypotheses by reconstructing phylogenetic relationships among the seven presently-accepted species in the genus, as well as examining their placement among other hymenosomatid crabs, using sequence data from two nuclear markers (Adenine Nucleotide Transporter [ANT] exon 2 and 18S rDNA) and three mitochondrial markers (COI, 12S and 16S rDNA). The five southern African representatives of the genus were recovered as a monophyletic lineage, and another southern African species, Neorhynchoplax bovis, was identified as their sister taxon. The two species of Hymenosoma from the South Pacific neither clustered with their African congeners, nor with each other, and should therefore both be placed into different genera. Molecular dating supports a post-Gondwanan origin of the Hymenosomatidae. While long-distance dispersal cannot be ruled out to explain the presence of the family Hymenosomatidae on the former Gondwanan land-masses and beyond, the evolutionary history of the African species of Hymenosoma indicates that a third means of speciation may be important in this group: gradual along-coast dispersal from tropical towards temperate regions, with range expansions into formerly inhospitable habitat during warm climatic phases, followed by adaptation and speciation during subsequent cooler phases.
- Full Text:
- Date Issued: 2009
Oceanic dispersal barriers, adaptation and larval retention: an interdisciplinary assessment of potential factors maintaining a phylogeographic break between sister lineages of an African prawn
- Teske, Peter R, Papadopoulos, Isabelle, Newman, Brent K, Dworschak, Peter C, McQuaid, Christopher D, Barker, Nigel P
- Authors: Teske, Peter R , Papadopoulos, Isabelle , Newman, Brent K , Dworschak, Peter C , McQuaid, Christopher D , Barker, Nigel P
- Date: 2008
- Language: English
- Type: Article
- Identifier: vital:6546 , http://hdl.handle.net/10962/d1006002 , http://dx.doi.org/10.1186/1471-2148-8-341
- Description: Background. Genetic breaks separating regional lineages of marine organisms with potentially high broadcasting abilities are generally attributed either to dispersal barriers such as currents or upwelling, or to behavioural strategies promoting self-recruitment. We investigated whether such patterns could potentially also be explained by adaptations to different environmental conditions by studying two morphologically distinguishable genetic lineages of the estuarine mudprawn Upogebia africana across a biogeographic disjunction in south-eastern Africa. The study area encompasses a transition between temperate and subtropical biotas, where the warm, southward-flowing Agulhas Current is deflected away from the coast, and its inshore edge is characterised by intermittent upwelling. To determine how this phylogeographic break is maintained, we estimated gene flow among populations in the region, tested for isolation by distance as an indication of larval retention, and reared larvae of the temperate and subtropical lineages at a range of different temperatures. Results. Of four populations sampled, the two northernmost exclusively included the subtropical lineage, a central population had a mixture of both lineages, and the southernmost estuary had only haplotypes of the temperate lineage. No evidence was found for isolation by distance, and gene flow was bidirectional and of similar magnitude among adjacent populations. In both lineages, the optimum temperature for larval development was at about 23°C, but a clear difference was found at lower temperatures. While larvae of the temperate lineage could complete development at temperatures as low as 12°C, those of the subtropical lineage did not complete development below 17°C. Conclusion. The results indicate that both southward dispersal of the subtropical lineage inshore of the Agulhas Current, and its establishment in the temperate province, may be limited primarily by low water temperatures. There is no evidence that the larvae of the temperate lineage would survive less well in the subtropical province than in their native habitat, and their exclusion from this region may be due to a combination of upwelling, short larval duration with limited dispersal potential near the coast, plus transport away from the coast of larvae that become entrained in the Agulhas Current. This study shows how methods from different fields of research (genetics, physiology, oceanography and morphology) can be combined to study phylogeographic patterns.
- Full Text:
- Date Issued: 2008
- Authors: Teske, Peter R , Papadopoulos, Isabelle , Newman, Brent K , Dworschak, Peter C , McQuaid, Christopher D , Barker, Nigel P
- Date: 2008
- Language: English
- Type: Article
- Identifier: vital:6546 , http://hdl.handle.net/10962/d1006002 , http://dx.doi.org/10.1186/1471-2148-8-341
- Description: Background. Genetic breaks separating regional lineages of marine organisms with potentially high broadcasting abilities are generally attributed either to dispersal barriers such as currents or upwelling, or to behavioural strategies promoting self-recruitment. We investigated whether such patterns could potentially also be explained by adaptations to different environmental conditions by studying two morphologically distinguishable genetic lineages of the estuarine mudprawn Upogebia africana across a biogeographic disjunction in south-eastern Africa. The study area encompasses a transition between temperate and subtropical biotas, where the warm, southward-flowing Agulhas Current is deflected away from the coast, and its inshore edge is characterised by intermittent upwelling. To determine how this phylogeographic break is maintained, we estimated gene flow among populations in the region, tested for isolation by distance as an indication of larval retention, and reared larvae of the temperate and subtropical lineages at a range of different temperatures. Results. Of four populations sampled, the two northernmost exclusively included the subtropical lineage, a central population had a mixture of both lineages, and the southernmost estuary had only haplotypes of the temperate lineage. No evidence was found for isolation by distance, and gene flow was bidirectional and of similar magnitude among adjacent populations. In both lineages, the optimum temperature for larval development was at about 23°C, but a clear difference was found at lower temperatures. While larvae of the temperate lineage could complete development at temperatures as low as 12°C, those of the subtropical lineage did not complete development below 17°C. Conclusion. The results indicate that both southward dispersal of the subtropical lineage inshore of the Agulhas Current, and its establishment in the temperate province, may be limited primarily by low water temperatures. There is no evidence that the larvae of the temperate lineage would survive less well in the subtropical province than in their native habitat, and their exclusion from this region may be due to a combination of upwelling, short larval duration with limited dispersal potential near the coast, plus transport away from the coast of larvae that become entrained in the Agulhas Current. This study shows how methods from different fields of research (genetics, physiology, oceanography and morphology) can be combined to study phylogeographic patterns.
- Full Text:
- Date Issued: 2008
Temporal and spatial variability in stable isotope ratios of SPM link to local hydrography and longer term SPM averages suggest heavy dependence of mussels on nearshore production
- Hill, Jaclyn M, McQuaid, Christopher D, Kaehler, Sven
- Authors: Hill, Jaclyn M , McQuaid, Christopher D , Kaehler, Sven
- Date: 2008
- Language: English
- Type: text , Article
- Identifier: vital:6969 , http://hdl.handle.net/10962/d1012034
- Description: Temporal changes in hydrography affect suspended particulate matter (SPM) composition and distribution in coastal systems, potentially influencing the diets of suspension feeders. Temporal variation in SPM and in the diet of the mussel Perna perna, were investigated using stable isotope analysis. The δ13C and δ15 N ratios of SPM, mussels and macroalgae were determined monthly, with SPM samples collected along a 10 km onshore–offshore transect, over 14 months at Kenton-on-Sea, on the south coast of South Africa. Clear nearshore (0 km) to offshore (10 km) carbon depletion gradients were seen in SPM during all months and extended for 50 km offshore on one occasion. Carbon enrichment of coastal SPM in winter (June–August 2004 and May 2005) indicated temporal changes in the nearshore detrital pool, presumably reflecting changes in macroalgal detritus, linked to local changes in coastal hydrography and algal seasonality. Nitrogen patterns were less clear, with SPM enrichment seen between July and October 2004 from 0 to 10 km. Nearshore SPM demonstrated cyclical patterns in carbon over 24-h periods that correlated closely with tidal cycles and mussel carbon signatures, sampled monthly, demonstrated fluctuations that could not be correlated to seasonal or monthly changes in SPM. Macroalgae showed extreme variability in isotopic signatures, with no discernable patterns. IsoSource mixing models indicated over 50% reliance of mussel tissue on nearshore carbon, highlighting the importance of nearshore SPM in mussel diet. Overall, carbon variation in SPM at both large and small temporal scales can be related to hydrographic processes, but is masked in mussels by long-term isotope integration.
- Full Text:
- Date Issued: 2008
- Authors: Hill, Jaclyn M , McQuaid, Christopher D , Kaehler, Sven
- Date: 2008
- Language: English
- Type: text , Article
- Identifier: vital:6969 , http://hdl.handle.net/10962/d1012034
- Description: Temporal changes in hydrography affect suspended particulate matter (SPM) composition and distribution in coastal systems, potentially influencing the diets of suspension feeders. Temporal variation in SPM and in the diet of the mussel Perna perna, were investigated using stable isotope analysis. The δ13C and δ15 N ratios of SPM, mussels and macroalgae were determined monthly, with SPM samples collected along a 10 km onshore–offshore transect, over 14 months at Kenton-on-Sea, on the south coast of South Africa. Clear nearshore (0 km) to offshore (10 km) carbon depletion gradients were seen in SPM during all months and extended for 50 km offshore on one occasion. Carbon enrichment of coastal SPM in winter (June–August 2004 and May 2005) indicated temporal changes in the nearshore detrital pool, presumably reflecting changes in macroalgal detritus, linked to local changes in coastal hydrography and algal seasonality. Nitrogen patterns were less clear, with SPM enrichment seen between July and October 2004 from 0 to 10 km. Nearshore SPM demonstrated cyclical patterns in carbon over 24-h periods that correlated closely with tidal cycles and mussel carbon signatures, sampled monthly, demonstrated fluctuations that could not be correlated to seasonal or monthly changes in SPM. Macroalgae showed extreme variability in isotopic signatures, with no discernable patterns. IsoSource mixing models indicated over 50% reliance of mussel tissue on nearshore carbon, highlighting the importance of nearshore SPM in mussel diet. Overall, carbon variation in SPM at both large and small temporal scales can be related to hydrographic processes, but is masked in mussels by long-term isotope integration.
- Full Text:
- Date Issued: 2008
Climate change, genetics or human choice: why were the shells of mankind’s earliest ornament larger in the Pleistocene than in the Holocene?
- Teske, Peter R, Papadopoulos, Isabelle, McQuaid, Christopher D, Newman, Brent K, Barker, Nigel P
- Authors: Teske, Peter R , Papadopoulos, Isabelle , McQuaid, Christopher D , Newman, Brent K , Barker, Nigel P
- Date: 2007
- Language: English
- Type: Article
- Identifier: vital:6952 , http://hdl.handle.net/10962/d1011984
- Description: The southern African tick shell, Nassarius kraussianus (Dunker, 1846), has been identified as being the earliest known ornamental object used by human beings. Shell beads dated from ~75,000 years ago (Pleistocene era) were found in a cave located on South Africa's south coast. Beads made from N. kraussianus shells have also been found in deposits in this region dating from the beginning of the Holocene era (<10,000 years ago). These younger shells were significantly smaller, a phenomenon that has been attributed to a change in human preference. We investigated two alternative hypotheses explaining the difference in shell size: a) N. kraussianus comprises at least two genetic lineages that differ in size; b) the difference in shell size is due to phenotypic plasticity and is a function of environmental conditions. To test these hypotheses, we first reconstructed the species' phylogeographic history, and second, we measured the shell sizes of extant individuals throughout South Africa. Although two genetic lineages were identified, the sharing of haplotypes between these suggests that there is no genetic basis for the size differences. Extant individuals from the cool temperate west coast had significantly larger shells than populations in the remainder of the country, suggesting that N. kraussianus grows to a larger size in colder water. The decrease in fossil shell size from Pleistocene to Holocene was likely due to increased temperatures as a result of climate change at the beginning of the present interglacial period. We hypothesise that the sizes of N. kraussianus fossil shells can therefore serve as indicators of the climatic conditions that were prevalent in a particular region at the time when they were deposited. Moreover, N. kraussianus could serve as a biomonitor to study the impacts of future climate change on coastal biota in southern Africa.
- Full Text:
- Date Issued: 2007
- Authors: Teske, Peter R , Papadopoulos, Isabelle , McQuaid, Christopher D , Newman, Brent K , Barker, Nigel P
- Date: 2007
- Language: English
- Type: Article
- Identifier: vital:6952 , http://hdl.handle.net/10962/d1011984
- Description: The southern African tick shell, Nassarius kraussianus (Dunker, 1846), has been identified as being the earliest known ornamental object used by human beings. Shell beads dated from ~75,000 years ago (Pleistocene era) were found in a cave located on South Africa's south coast. Beads made from N. kraussianus shells have also been found in deposits in this region dating from the beginning of the Holocene era (<10,000 years ago). These younger shells were significantly smaller, a phenomenon that has been attributed to a change in human preference. We investigated two alternative hypotheses explaining the difference in shell size: a) N. kraussianus comprises at least two genetic lineages that differ in size; b) the difference in shell size is due to phenotypic plasticity and is a function of environmental conditions. To test these hypotheses, we first reconstructed the species' phylogeographic history, and second, we measured the shell sizes of extant individuals throughout South Africa. Although two genetic lineages were identified, the sharing of haplotypes between these suggests that there is no genetic basis for the size differences. Extant individuals from the cool temperate west coast had significantly larger shells than populations in the remainder of the country, suggesting that N. kraussianus grows to a larger size in colder water. The decrease in fossil shell size from Pleistocene to Holocene was likely due to increased temperatures as a result of climate change at the beginning of the present interglacial period. We hypothesise that the sizes of N. kraussianus fossil shells can therefore serve as indicators of the climatic conditions that were prevalent in a particular region at the time when they were deposited. Moreover, N. kraussianus could serve as a biomonitor to study the impacts of future climate change on coastal biota in southern Africa.
- Full Text:
- Date Issued: 2007
Wave exposure effects on population structure and recruitment in the mussel Perna perna suggest regulation primarily through availability of recruits and food, not space
- McQuaid, Christopher D, Lindsay, Tracy L
- Authors: McQuaid, Christopher D , Lindsay, Tracy L
- Date: 2007
- Language: English
- Type: Article
- Identifier: vital:6968 , http://hdl.handle.net/10962/d1012033
- Description: Recruitment and population structure of Perna perna in low shore mussel beds were investigated over 15 months at six sites along the south coast of South Africa. Initial, subjective classification of sites as wave exposed or wave sheltered (three of each) was confirmed using the dissolution of cement blocks to measure average water flux and dynamometers for maximum wave force. Recruitment occurred throughout the year, but recruit (1–5 mm) densities were significantly higher from January to April 1996 on both shore types. Recruit densities were positively correlated with adult (>15 mm) densities for both shore types (P < 0.05) but the correlations were extremely weak (r 2 < 0.06 in each case). In areas with 100% cover, adult size (mean and maximum lengths) was greater on exposed sites, but density showed the reverse and was negatively correlated with maximum wave strength (r = −0.84). Despite differences in adult densities and sizes, biomass, which is a product of the two, showed no significant difference between the two shore types (ANOVA P > 0.05). Thus wave exposure dramatically affects density, recruitment and mussel size, but not recruitment timing or biomass where there is 100% cover, and mediates a three-way interaction among food supply, larval supply and intraspecific competition for space. In contrast to shores with saturation recruitment, mussel biomass here appears to be limited by recruit supply and constraints of food, especially on sheltered shores, while density is regulated through intraspecific competition for space primarily on exposed shores and at small spatial scales.
- Full Text:
- Date Issued: 2007
- Authors: McQuaid, Christopher D , Lindsay, Tracy L
- Date: 2007
- Language: English
- Type: Article
- Identifier: vital:6968 , http://hdl.handle.net/10962/d1012033
- Description: Recruitment and population structure of Perna perna in low shore mussel beds were investigated over 15 months at six sites along the south coast of South Africa. Initial, subjective classification of sites as wave exposed or wave sheltered (three of each) was confirmed using the dissolution of cement blocks to measure average water flux and dynamometers for maximum wave force. Recruitment occurred throughout the year, but recruit (1–5 mm) densities were significantly higher from January to April 1996 on both shore types. Recruit densities were positively correlated with adult (>15 mm) densities for both shore types (P < 0.05) but the correlations were extremely weak (r 2 < 0.06 in each case). In areas with 100% cover, adult size (mean and maximum lengths) was greater on exposed sites, but density showed the reverse and was negatively correlated with maximum wave strength (r = −0.84). Despite differences in adult densities and sizes, biomass, which is a product of the two, showed no significant difference between the two shore types (ANOVA P > 0.05). Thus wave exposure dramatically affects density, recruitment and mussel size, but not recruitment timing or biomass where there is 100% cover, and mediates a three-way interaction among food supply, larval supply and intraspecific competition for space. In contrast to shores with saturation recruitment, mussel biomass here appears to be limited by recruit supply and constraints of food, especially on sheltered shores, while density is regulated through intraspecific competition for space primarily on exposed shores and at small spatial scales.
- Full Text:
- Date Issued: 2007
Biogeographic and nearshore–offshore trends in isotope ratios of intertidal mussels and their food sources around the coast of southern Africa
- Hill, Jaclyn M, McQuaid, Christopher D, Kaehler, Sven
- Authors: Hill, Jaclyn M , McQuaid, Christopher D , Kaehler, Sven
- Date: 2006
- Language: English
- Type: text , Article
- Identifier: vital:6878 , http://hdl.handle.net/10962/d1011633
- Description: There are broad differences in oceanography and primary production around the southern African coast that are likely to give rise to major differences in trophic pathways. Stable isotope ratios provide integrated information on trophic relationships, yet there has been limited research on geographic variation in isotopic composition of marine consumers and their food. In this study, δ13C and δ15N of suspended particulate matter (SPM), intertidal mussels and common macroalgae along the southern African coastline were explored. Nearshore–offshore isotope trends as well as biogeographic and temporal patterns in isotopic ratios of mussel tissue, macroalgae and SPM were investigated at 12 sites along the coast from Namibia to the Mozambique border. SPM exhibited overall trends of nearshore 13C depletion from south-west to north-east along the coastline and from nearshore (0 km) to offshore (10 km) waters, in both cases suggesting a shift from a nearshore signature strongly influenced by macroalgal detritus to one more representative of oceanic phytoplankton. With one exception it was possible, using discriminant analysis, to categorize mussel populations into 4 geographic groups, on the basis of both carbon and nitrogen signatures: the east coast, the south-east coast, the south-west coast and the west coast. Macroalgae showed no consistent biogeographic trends and need to be examined in greater detail to relate nearshore SPM values to living macroalgal signatures. A linear mixing model indicated that mussels along the entire coastline generally demonstrated more than 50% dependence on nearshore carbon and nitrogen, emphasizing the importance of nearshore primary production to intertidal consumers.
- Full Text:
- Date Issued: 2006
- Authors: Hill, Jaclyn M , McQuaid, Christopher D , Kaehler, Sven
- Date: 2006
- Language: English
- Type: text , Article
- Identifier: vital:6878 , http://hdl.handle.net/10962/d1011633
- Description: There are broad differences in oceanography and primary production around the southern African coast that are likely to give rise to major differences in trophic pathways. Stable isotope ratios provide integrated information on trophic relationships, yet there has been limited research on geographic variation in isotopic composition of marine consumers and their food. In this study, δ13C and δ15N of suspended particulate matter (SPM), intertidal mussels and common macroalgae along the southern African coastline were explored. Nearshore–offshore isotope trends as well as biogeographic and temporal patterns in isotopic ratios of mussel tissue, macroalgae and SPM were investigated at 12 sites along the coast from Namibia to the Mozambique border. SPM exhibited overall trends of nearshore 13C depletion from south-west to north-east along the coastline and from nearshore (0 km) to offshore (10 km) waters, in both cases suggesting a shift from a nearshore signature strongly influenced by macroalgal detritus to one more representative of oceanic phytoplankton. With one exception it was possible, using discriminant analysis, to categorize mussel populations into 4 geographic groups, on the basis of both carbon and nitrogen signatures: the east coast, the south-east coast, the south-west coast and the west coast. Macroalgae showed no consistent biogeographic trends and need to be examined in greater detail to relate nearshore SPM values to living macroalgal signatures. A linear mixing model indicated that mussels along the entire coastline generally demonstrated more than 50% dependence on nearshore carbon and nitrogen, emphasizing the importance of nearshore primary production to intertidal consumers.
- Full Text:
- Date Issued: 2006
Impacts of marine biogeographic boundaries on phylogeographic patterns of three South African estuarine crustaceans
- Teske, Peter R, McQuaid, Christopher D, Froneman, P William, Barker, Nigel P
- Authors: Teske, Peter R , McQuaid, Christopher D , Froneman, P William , Barker, Nigel P
- Date: 2006
- Language: English
- Type: Article
- Identifier: vital:6548 , http://hdl.handle.net/10962/d1006004 , http://dx.doi.org/10.3354/meps314283
- Description: The South African coastline comprises 3 main biogeographic provinces: (1) the cool-temperate west coast, (2) the warm-temperate south coast, and (3) the subtropical east coast. The boundaries between these regions are defined by changes in species compositions and hydrological conditions. It is possible that these affect phylogeographic patterns of coastal organisms differently, depending on the species’ ecologies and modes of dispersal. In the present study, genealogies of 3 estuarine crustaceans, each characterized by a different mode of passive dispersal and present in more than one biogeographic province, were reconstructed using mtDNA COI sequences, and the impacts of biogeographic boundaries on their phylogeographic patterns were compared. The species were (mode of dispersal in brackets): (1) the mudprawn Upogebia africana (planktonic larvae), (2) the isopod Exosphaeroma hylecoetes (adult rafting), and (3) the cumacean Iphinoe truncata (adult drifting). Two major mtDNA lineages with slightly overlapping distributions were identified in U. africana (the species with the highest dispersal potential). The other 2 species had 3 mtDNA lineages each, which were characterized by strict geographic segregation. Phylogeographic breaks in U. africana and E. hylecoetes coincided with biogeographic boundaries, whereas the phylogeographic patterns identified in I. truncata may reflect persistent palaeogeographic patterns. Ecological factors and modes of dispersal are likely to have played a role in both cladogenesis of the different lineages and in the establishment of their present-day distribution patterns.
- Full Text:
- Date Issued: 2006
- Authors: Teske, Peter R , McQuaid, Christopher D , Froneman, P William , Barker, Nigel P
- Date: 2006
- Language: English
- Type: Article
- Identifier: vital:6548 , http://hdl.handle.net/10962/d1006004 , http://dx.doi.org/10.3354/meps314283
- Description: The South African coastline comprises 3 main biogeographic provinces: (1) the cool-temperate west coast, (2) the warm-temperate south coast, and (3) the subtropical east coast. The boundaries between these regions are defined by changes in species compositions and hydrological conditions. It is possible that these affect phylogeographic patterns of coastal organisms differently, depending on the species’ ecologies and modes of dispersal. In the present study, genealogies of 3 estuarine crustaceans, each characterized by a different mode of passive dispersal and present in more than one biogeographic province, were reconstructed using mtDNA COI sequences, and the impacts of biogeographic boundaries on their phylogeographic patterns were compared. The species were (mode of dispersal in brackets): (1) the mudprawn Upogebia africana (planktonic larvae), (2) the isopod Exosphaeroma hylecoetes (adult rafting), and (3) the cumacean Iphinoe truncata (adult drifting). Two major mtDNA lineages with slightly overlapping distributions were identified in U. africana (the species with the highest dispersal potential). The other 2 species had 3 mtDNA lineages each, which were characterized by strict geographic segregation. Phylogeographic breaks in U. africana and E. hylecoetes coincided with biogeographic boundaries, whereas the phylogeographic patterns identified in I. truncata may reflect persistent palaeogeographic patterns. Ecological factors and modes of dispersal are likely to have played a role in both cladogenesis of the different lineages and in the establishment of their present-day distribution patterns.
- Full Text:
- Date Issued: 2006
Sand stress as a non-determinant of habitat segregation of indigenous (Perna perna) and invasive (Mytilus galloprovincialis) mussels in South Africa
- Zardi, Gerardo I, Nicastro, Katy R, Porri, Francesca, McQuaid, Christopher D
- Authors: Zardi, Gerardo I , Nicastro, Katy R , Porri, Francesca , McQuaid, Christopher D
- Date: 2006
- Language: English
- Type: Article
- Identifier: vital:6946 , http://hdl.handle.net/10962/d1011974
- Description: Periodical sand inundation influences diversity and distribution of intertidal species throughout the world. This study investigates the effect of sand stress on survival and on habitat segregation of the two dominant mussel species living in South Africa, the invasive Mytilus galloprovincialis and the indigenous Perna perna. P. perna occupies a lower intertidal zone which, monthly surveys over 1.5 years showed, is covered by sand for longer periods than the higher M. galloprovincialis zone. Despite this, when buried under sand, P. perna mortality rates were significantly higher than those of M. galloprovincialis in both laboratory and in field experiments. Under anoxic condition, P. perna mortality rates were still significantly higher than those for M. galloprovincialis, but both species died later than when exposed to sand burial, underlining the importance of the physical action of sand on mussel internal organs. When buried, both species accumulate sediments within the shell valves while still alive, but the quantities are much greater for P. perna. This suggests that P. perna gills are more severely damaged by sand abrasion and could explain its higher mortality rates. M. galloprovincialis has longer labial palps than P. perna, indicating a higher particle sorting ability and consequently explaining its lower mortality rates when exposed to sand in suspension. Habitat segregation is often explained by physiological tolerances, but in this case, such explanations fail. Although sand stress strongly affects the survival of the two species, it does not explain their vertical zonation. Contrary to our expectations, the species that is less well adapted to cope with sand stress maintains dominance in a habitat where such stress is high.
- Full Text:
- Date Issued: 2006
- Authors: Zardi, Gerardo I , Nicastro, Katy R , Porri, Francesca , McQuaid, Christopher D
- Date: 2006
- Language: English
- Type: Article
- Identifier: vital:6946 , http://hdl.handle.net/10962/d1011974
- Description: Periodical sand inundation influences diversity and distribution of intertidal species throughout the world. This study investigates the effect of sand stress on survival and on habitat segregation of the two dominant mussel species living in South Africa, the invasive Mytilus galloprovincialis and the indigenous Perna perna. P. perna occupies a lower intertidal zone which, monthly surveys over 1.5 years showed, is covered by sand for longer periods than the higher M. galloprovincialis zone. Despite this, when buried under sand, P. perna mortality rates were significantly higher than those of M. galloprovincialis in both laboratory and in field experiments. Under anoxic condition, P. perna mortality rates were still significantly higher than those for M. galloprovincialis, but both species died later than when exposed to sand burial, underlining the importance of the physical action of sand on mussel internal organs. When buried, both species accumulate sediments within the shell valves while still alive, but the quantities are much greater for P. perna. This suggests that P. perna gills are more severely damaged by sand abrasion and could explain its higher mortality rates. M. galloprovincialis has longer labial palps than P. perna, indicating a higher particle sorting ability and consequently explaining its lower mortality rates when exposed to sand in suspension. Habitat segregation is often explained by physiological tolerances, but in this case, such explanations fail. Although sand stress strongly affects the survival of the two species, it does not explain their vertical zonation. Contrary to our expectations, the species that is less well adapted to cope with sand stress maintains dominance in a habitat where such stress is high.
- Full Text:
- Date Issued: 2006
Spatio-temporal variability of larval abundance and settlement of Perna perna: differential delivery of mussels
- Porri, Francesca, McQuaid, Christopher D, Radloff, Sarah E
- Authors: Porri, Francesca , McQuaid, Christopher D , Radloff, Sarah E
- Date: 2006
- Language: English
- Type: text , Article
- Identifier: vital:6877 , http://hdl.handle.net/10962/d1011625 , http://dx.doi.org/10.3354/meps315141
- Description: We examined larval availability and settlement of the intertidal mussel Perna perna simultaneously at different spatial and temporal scales using a nested design at 2 sites, 3 km apart on the south coast of South Africa. Each site had 3 locations (300 m apart) where 5 artificial settler collectors were placed about 20 cm apart. Collectors were replaced on temporal scales varying from fortnightly (for 16 mo) to daily (2 series of 15 to 20 d). Each intertidal location was paired with an inshore location (these too were 300 m apart) within 500 m of the shore, where larval availability was measured by 3 vertical plankton hauls collected on the same dates as for settler sampling. There was strong temporal variation in abundances of larvae and settlers, and no correlation (r always < 0.14) was found between the two. Larvae were abundant only at the start of sampling and rare for the rest of the study, while distinct peaks in settler numbers occurred later. No spatial effect was detected for larval availability, while there was strong spatial variation in settlement at the location level. These results indicate that, on scales of 100s of m to km, delivery of larvae from the nearshore water column onto the shore is strongly differential, with some locations consistently receiving more settlers than others. We conclude that, at these sites, the patchiness in settlement observed on scales of 100s of m depends on differential delivery, rather than differential offshore distribution of larvae. We suggest that differential delivery is due to the effect of nearshore bottom topography on local hydrodynamics.
- Full Text:
- Date Issued: 2006
- Authors: Porri, Francesca , McQuaid, Christopher D , Radloff, Sarah E
- Date: 2006
- Language: English
- Type: text , Article
- Identifier: vital:6877 , http://hdl.handle.net/10962/d1011625 , http://dx.doi.org/10.3354/meps315141
- Description: We examined larval availability and settlement of the intertidal mussel Perna perna simultaneously at different spatial and temporal scales using a nested design at 2 sites, 3 km apart on the south coast of South Africa. Each site had 3 locations (300 m apart) where 5 artificial settler collectors were placed about 20 cm apart. Collectors were replaced on temporal scales varying from fortnightly (for 16 mo) to daily (2 series of 15 to 20 d). Each intertidal location was paired with an inshore location (these too were 300 m apart) within 500 m of the shore, where larval availability was measured by 3 vertical plankton hauls collected on the same dates as for settler sampling. There was strong temporal variation in abundances of larvae and settlers, and no correlation (r always < 0.14) was found between the two. Larvae were abundant only at the start of sampling and rare for the rest of the study, while distinct peaks in settler numbers occurred later. No spatial effect was detected for larval availability, while there was strong spatial variation in settlement at the location level. These results indicate that, on scales of 100s of m to km, delivery of larvae from the nearshore water column onto the shore is strongly differential, with some locations consistently receiving more settlers than others. We conclude that, at these sites, the patchiness in settlement observed on scales of 100s of m depends on differential delivery, rather than differential offshore distribution of larvae. We suggest that differential delivery is due to the effect of nearshore bottom topography on local hydrodynamics.
- Full Text:
- Date Issued: 2006